RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 MAP3K12Q12852 859 aa23.94■■□□□ 1.42
PABPC1-215ENST00000520804 TMED8Q6PL24 325 aaPredicted RBP23.94■■□□□ 1.42
PABPC1-215ENST00000520804 RHPN1Q8TCX5 695 aa23.94■■□□□ 1.42
PABPC1-215ENST00000520804 IL1RAPL2Q9NP60 686 aa23.94■■□□□ 1.42
PABPC1-215ENST00000520804 GDF11O95390 407 aa23.93■■□□□ 1.42
PABPC1-215ENST00000520804 SHROOM1Q2M3G4 852 aaPredicted RBP23.93■■□□□ 1.42
PABPC1-215ENST00000520804 HABP4Q5JVS0 413 aaKnown RBP23.93■■□□□ 1.42
PABPC1-215ENST00000520804 UNC93B1Q9H1C4 597 aa23.93■■□□□ 1.42
PABPC1-215ENST00000520804 TMOD4Q9NZQ9 345 aa23.93■■□□□ 1.42
PABPC1-215ENST00000520804 ZBTB21Q9ULJ3 1066 aa23.93■■□□□ 1.42
PABPC1-215ENST00000520804 MYH1P12882 1939 aa23.92■■□□□ 1.42
PABPC1-215ENST00000520804 C19orf81C9J6K1 198 aa23.92■■□□□ 1.42
PABPC1-215ENST00000520804 INHAP05111 366 aa23.92■■□□□ 1.42
PABPC1-215ENST00000520804 USP5P45974 858 aa23.92■■□□□ 1.42
PABPC1-215ENST00000520804 RPAP2Q8IXW5 612 aaPredicted RBP23.92■■□□□ 1.42
PABPC1-215ENST00000520804 USP17L10C9JJH3 530 aa23.91■■□□□ 1.42
PABPC1-215ENST00000520804 HOXA7P31268 230 aaPredicted RBP23.91■■□□□ 1.42
PABPC1-215ENST00000520804 UBE2Q1Q7Z7E8 422 aa23.91■■□□□ 1.42
PABPC1-215ENST00000520804 U2AF1L4Q8WU68 220 aaKnown RBP23.91■■□□□ 1.42
PABPC1-215ENST00000520804 PCDH10Q9P2E7 1040 aa23.91■■□□□ 1.42
PABPC1-215ENST00000520804 DDX19BQ9UMR2 479 aa23.91■■□□□ 1.42
PABPC1-215ENST00000520804 DOCK3Q8IZD9 2030 aa23.91■■□□□ 1.42
PABPC1-215ENST00000520804 IRX3P78415 501 aaPredicted RBP23.9■■□□□ 1.42
PABPC1-215ENST00000520804 CLASRPQ8N2M8 674 aaKnown RBP23.9■■□□□ 1.42
PABPC1-215ENST00000520804 KIF1BPQ96EK5 621 aa23.9■■□□□ 1.42
PABPC1-215ENST00000520804 ZBTB40Q9NUA8 1239 aa23.9■■□□□ 1.42
PABPC1-215ENST00000520804 MORF4L1Q9UBU8 362 aa23.9■■□□□ 1.42
PABPC1-215ENST00000520804 TAOK2Q9UL54 1235 aa23.9■■□□□ 1.42
PABPC1-215ENST00000520804 COG6Q9Y2V7 657 aa23.9■■□□□ 1.42
PABPC1-215ENST00000520804 SGPL1O95470 568 aa23.89■■□□□ 1.41
PABPC1-215ENST00000520804 TTF1Q15361 905 aaPredicted RBP23.89■■□□□ 1.41
PABPC1-215ENST00000520804 TATDN1Q6P1N9 297 aa23.89■■□□□ 1.41
PABPC1-215ENST00000520804 SIRT2Q8IXJ6 389 aa23.89■■□□□ 1.41
PABPC1-215ENST00000520804 EHD4Q9H223 541 aa23.89■■□□□ 1.41
PABPC1-215ENST00000520804 H0YGN5 161 aa23.88■■□□□ 1.41
PABPC1-215ENST00000520804 HMMRO75330 724 aa23.88■■□□□ 1.41
PABPC1-215ENST00000520804 GH2P01242 217 aa23.88■■□□□ 1.41
PABPC1-215ENST00000520804 P2RX7Q99572 595 aaKnown RBP23.88■■□□□ 1.41
PABPC1-215ENST00000520804 RIOK1Q9BRS2 568 aaKnown RBP23.88■■□□□ 1.41
PABPC1-215ENST00000520804 SERPINB13Q9UIV8 391 aa23.88■■□□□ 1.41
PABPC1-215ENST00000520804 GJD2Q9UKL4 321 aa23.88■■□□□ 1.41
PABPC1-215ENST00000520804 APBB1O00213 710 aa23.87■■□□□ 1.41
PABPC1-215ENST00000520804 TTC6Q86TZ1 520 aa23.87■■□□□ 1.41
PABPC1-215ENST00000520804 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.87■■□□□ 1.41
PABPC1-215ENST00000520804 EMILIN3Q9NT22 766 aa23.87■■□□□ 1.41
PABPC1-215ENST00000520804 HERVK_113P62684 666 aa23.86■■□□□ 1.41
PABPC1-215ENST00000520804 DPF3Q92784 378 aa23.86■■□□□ 1.41
PABPC1-215ENST00000520804 PAK6Q9NQU5 681 aaPredicted RBP23.86■■□□□ 1.41
PABPC1-215ENST00000520804 MAGEB6P1A0A0J9YX57 407 aa23.85■■□□□ 1.41
PABPC1-215ENST00000520804 RAB11FIP3O75154 756 aa23.85■■□□□ 1.41
PABPC1-215ENST00000520804 FARP2O94887 1054 aaPredicted RBP23.85■■□□□ 1.41
PABPC1-215ENST00000520804 IFIT2P09913 472 aaKnown RBP23.85■■□□□ 1.41
PABPC1-215ENST00000520804 PDE6AP16499 860 aa23.85■■□□□ 1.41
PABPC1-215ENST00000520804 CAPN2P17655 700 aa23.85■■□□□ 1.41
PABPC1-215ENST00000520804 SLC9C2Q5TAH2 1124 aa23.85■■□□□ 1.41
PABPC1-215ENST00000520804 USP17L2Q6R6M4 530 aa23.85■■□□□ 1.41
PABPC1-215ENST00000520804 DEFB118Q96PH6 123 aa23.85■■□□□ 1.41
PABPC1-215ENST00000520804 HTATIP2Q9BUP3 242 aa23.85■■□□□ 1.41
PABPC1-215ENST00000520804 TXNRD2Q9NNW7 524 aa23.85■■□□□ 1.41
PABPC1-215ENST00000520804 COLQQ9Y215 455 aaPredicted RBP23.85■■□□□ 1.41
PABPC1-215ENST00000520804 DDX60LQ5H9U9 1706 aaKnown RBP23.84■■□□□ 1.41
PABPC1-215ENST00000520804 PLCD1P51178 756 aa23.84■■□□□ 1.41
PABPC1-215ENST00000520804 GPRC5AQ8NFJ5 357 aa23.84■■□□□ 1.41
PABPC1-215ENST00000520804 CHMP4BQ9H444 224 aaKnown RBP23.84■■□□□ 1.41
PABPC1-215ENST00000520804 RCAN3Q9UKA8 241 aa23.84■■□□□ 1.41
PABPC1-215ENST00000520804 PLXNB2O15031 1838 aa23.84■■□□□ 1.41
PABPC1-215ENST00000520804 GOLIM4O00461 696 aa23.83■■□□□ 1.41
PABPC1-215ENST00000520804 PEX10O60683 326 aa23.83■■□□□ 1.41
PABPC1-215ENST00000520804 TFRCP02786 760 aaKnown RBP23.83■■□□□ 1.41
PABPC1-215ENST00000520804 HMGCRP04035 888 aa23.83■■□□□ 1.41
PABPC1-215ENST00000520804 CERKLQ49MI3 558 aaPredicted RBP23.83■■□□□ 1.41
PABPC1-215ENST00000520804 GTF3C2Q8WUA4 911 aaPredicted RBP23.83■■□□□ 1.41
PABPC1-215ENST00000520804 C12orf42Q96LP6 360 aa23.83■■□□□ 1.41
PABPC1-215ENST00000520804 DNAJC2Q99543 621 aaKnown RBP23.83■■□□□ 1.41
PABPC1-215ENST00000520804 RBPJLQ9UBG7 517 aa23.83■■□□□ 1.41
PABPC1-215ENST00000520804 ZNF532Q9HCE3 1301 aa23.83■■□□□ 1.4
PABPC1-215ENST00000520804 NAV1Q8NEY1 1877 aa23.82■■□□□ 1.4
PABPC1-215ENST00000520804 SHMT1P34896 483 aa23.82■■□□□ 1.4
PABPC1-215ENST00000520804 RAB3GAP1Q15042 981 aa23.82■■□□□ 1.4
PABPC1-215ENST00000520804 ABCB5Q2M3G0 1257 aa23.82■■□□□ 1.4
PABPC1-215ENST00000520804 FEZ1Q99689 392 aa23.82■■□□□ 1.4
PABPC1-215ENST00000520804 CRNKL1Q9BZJ0 848 aaKnown RBP23.82■■□□□ 1.4
PABPC1-215ENST00000520804 CRISPLD2Q9H0B8 497 aa23.82■■□□□ 1.4
PABPC1-215ENST00000520804 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.82■■□□□ 1.4
PABPC1-215ENST00000520804 TCRBV5S4A2TA0A5A2 114 aa23.81■■□□□ 1.4
PABPC1-215ENST00000520804 POLR3DP05423 398 aaPredicted RBP23.81■■□□□ 1.4
PABPC1-215ENST00000520804 ERVK-9P63128 1117 aa23.8■■□□□ 1.4
PABPC1-215ENST00000520804 ERVK-24P63145 666 aa23.8■■□□□ 1.4
PABPC1-215ENST00000520804 GABPAQ06546 454 aa23.8■■□□□ 1.4
PABPC1-215ENST00000520804 ZYXQ15942 572 aaKnown RBP23.8■■□□□ 1.4
PABPC1-215ENST00000520804 Q3C1V9 767 aa23.8■■□□□ 1.4
PABPC1-215ENST00000520804 POTEEQ6S8J3 1075 aa23.8■■□□□ 1.4
PABPC1-215ENST00000520804 EDC3Q96F86 508 aaKnown RBP23.8■■□□□ 1.4
PABPC1-215ENST00000520804 KIAA1683Q9H0B3 1180 aa23.8■■□□□ 1.4
PABPC1-215ENST00000520804 BCL11AQ9H165 835 aa23.8■■□□□ 1.4
PABPC1-215ENST00000520804 CABP5Q9NP86 173 aa23.8■■□□□ 1.4
PABPC1-215ENST00000520804 CYP2B6P20813 491 aa23.79■■□□□ 1.4
PABPC1-215ENST00000520804 MAPK4P31152 587 aa23.79■■□□□ 1.4
PABPC1-215ENST00000520804 USP14P54578 494 aa23.79■■□□□ 1.4
PABPC1-215ENST00000520804 TRIM32Q13049 653 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms