RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 NAV1Q8NEY1 1877 aa10.01□□□□□ -0.81
CSMD1-209ENST00000520630 ZNF521Q96K83 1311 aa10.01□□□□□ -0.81
CSMD1-209ENST00000520630 LRRC37A2A6NM11 1700 aa10□□□□□ -0.81
CSMD1-209ENST00000520630 LDHBP07195 334 aaKnown RBP10□□□□□ -0.81
CSMD1-209ENST00000520630 HOXA7P31268 230 aaPredicted RBP10□□□□□ -0.81
CSMD1-209ENST00000520630 EXOSC9Q06265 439 aaKnown RBP10□□□□□ -0.81
CSMD1-209ENST00000520630 MAP3K12Q12852 859 aa10□□□□□ -0.81
CSMD1-209ENST00000520630 SNX17Q15036 470 aa10□□□□□ -0.81
CSMD1-209ENST00000520630 PUM3Q15397 648 aaKnown RBP10□□□□□ -0.81
CSMD1-209ENST00000520630 SALL2Q9Y467 1007 aaPredicted RBP10□□□□□ -0.81
CSMD1-209ENST00000520630 SCN5AQ14524 2016 aa10□□□□□ -0.81
CSMD1-209ENST00000520630 CNMDO75829 334 aa9.99□□□□□ -0.81
CSMD1-209ENST00000520630 ZKSCAN1P17029 563 aaPredicted RBP9.99□□□□□ -0.81
CSMD1-209ENST00000520630 CAP2P40123 477 aa9.99□□□□□ -0.81
CSMD1-209ENST00000520630 PHKA1P46020 1223 aa9.99□□□□□ -0.81
CSMD1-209ENST00000520630 HERVK_113P62684 666 aa9.99□□□□□ -0.81
CSMD1-209ENST00000520630 PICALMQ13492 652 aa9.99□□□□□ -0.81
CSMD1-209ENST00000520630 SLC39A5Q6ZMH5 540 aa9.99□□□□□ -0.81
CSMD1-209ENST00000520630 GPR142Q7Z601 462 aa9.99□□□□□ -0.81
CSMD1-209ENST00000520630 ZSCAN29Q8IWY8 852 aaPredicted RBP9.99□□□□□ -0.81
CSMD1-209ENST00000520630 FAM122AQ96E09 287 aa9.99□□□□□ -0.81
CSMD1-209ENST00000520630 FAM163AQ96GL9 167 aaPredicted RBP9.99□□□□□ -0.81
CSMD1-209ENST00000520630 SRCIN1Q9C0H9 1055 aa9.99□□□□□ -0.81
CSMD1-209ENST00000520630 OSBPL5Q9H0X9 879 aaPredicted RBP9.99□□□□□ -0.81
CSMD1-209ENST00000520630 PDLIM7Q9NR12 457 aa9.99□□□□□ -0.81
CSMD1-209ENST00000520630 IL16Q14005 1332 aa9.99□□□□□ -0.81
CSMD1-209ENST00000520630 TMEM265A0A087WTH1 108 aa9.98□□□□□ -0.81
CSMD1-209ENST00000520630 ZBTB22O15209 634 aa9.98□□□□□ -0.81
CSMD1-209ENST00000520630 IFIT1P09914 478 aaKnown RBP9.98□□□□□ -0.81
CSMD1-209ENST00000520630 ERVK-9P63128 1117 aa9.98□□□□□ -0.81
CSMD1-209ENST00000520630 ERVK-24P63145 666 aa9.98□□□□□ -0.81
CSMD1-209ENST00000520630 GJC2Q5T442 439 aaPredicted RBP9.98□□□□□ -0.81
CSMD1-209ENST00000520630 SLC4A10Q6U841 1118 aa9.98□□□□□ -0.81
CSMD1-209ENST00000520630 GPRC5AQ8NFJ5 357 aa9.98□□□□□ -0.81
CSMD1-209ENST00000520630 NPLOC4Q8TAT6 608 aa9.98□□□□□ -0.81
CSMD1-209ENST00000520630 SOCS4Q8WXH5 440 aa9.98□□□□□ -0.81
CSMD1-209ENST00000520630 LPIN2Q92539 896 aa9.98□□□□□ -0.81
CSMD1-209ENST00000520630 LPAR1Q92633 364 aa9.98□□□□□ -0.81
CSMD1-209ENST00000520630 DNAJC18Q9H819 358 aa9.98□□□□□ -0.81
CSMD1-209ENST00000520630 DDX20Q9UHI6 824 aaKnown RBP9.98□□□□□ -0.81
CSMD1-209ENST00000520630 ATP11BQ9Y2G3 1177 aa9.98□□□□□ -0.81
CSMD1-209ENST00000520630 PIEZO1Q92508 2521 aa9.98□□□□□ -0.81
CSMD1-209ENST00000520630 USP17L5A8MUK1 530 aa9.97□□□□□ -0.81
CSMD1-209ENST00000520630 EYA2O00167 538 aa9.97□□□□□ -0.81
CSMD1-209ENST00000520630 DNM1LO00429 736 aa9.97□□□□□ -0.81
CSMD1-209ENST00000520630 ADORA1P30542 326 aa9.97□□□□□ -0.81
CSMD1-209ENST00000520630 RGS2P41220 211 aa9.97□□□□□ -0.81
CSMD1-209ENST00000520630 BTDP43251 543 aa9.97□□□□□ -0.81
CSMD1-209ENST00000520630 MAP2K5Q13163 448 aa9.97□□□□□ -0.81
CSMD1-209ENST00000520630 MTMR2Q13614 643 aa9.97□□□□□ -0.81
CSMD1-209ENST00000520630 TRIM60Q495X7 471 aa9.97□□□□□ -0.81
CSMD1-209ENST00000520630 TRMT44Q8IYL2 757 aaKnown RBP9.97□□□□□ -0.81
CSMD1-209ENST00000520630 APBA2Q99767 749 aa9.97□□□□□ -0.81
CSMD1-209ENST00000520630 WDR18Q9BV38 432 aa9.97□□□□□ -0.81
CSMD1-209ENST00000520630 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.97□□□□□ -0.81
CSMD1-209ENST00000520630 NDUFB9Q9Y6M9 179 aa9.97□□□□□ -0.81
CSMD1-209ENST00000520630 SYNGAP1Q96PV0 1343 aa9.97□□□□□ -0.81
CSMD1-209ENST00000520630 TRIOO75962 3097 aa9.97□□□□□ -0.81
CSMD1-209ENST00000520630 GPR75-ASB3A0A0A6YYF3 556 aa9.96□□□□□ -0.82
CSMD1-209ENST00000520630 NPM3O75607 178 aaKnown RBP9.96□□□□□ -0.82
CSMD1-209ENST00000520630 CYBAP13498 195 aa9.96□□□□□ -0.82
CSMD1-209ENST00000520630 SLC5A1P13866 664 aa9.96□□□□□ -0.82
CSMD1-209ENST00000520630 MAPK4P31152 587 aa9.96□□□□□ -0.82
CSMD1-209ENST00000520630 BACE1P56817 501 aa9.96□□□□□ -0.82
CSMD1-209ENST00000520630 PABPC4Q13310 644 aaKnown RBP eCLIP9.96□□□□□ -0.82
CSMD1-209ENST00000520630 ADGRE1Q14246 886 aa9.96□□□□□ -0.82
CSMD1-209ENST00000520630 PLEKHH3Q7Z736 793 aa9.96□□□□□ -0.82
CSMD1-209ENST00000520630 ADAMTS19Q8TE59 1207 aa9.96□□□□□ -0.82
CSMD1-209ENST00000520630 NECAB3Q96P71 396 aaPredicted RBP9.96□□□□□ -0.82
CSMD1-209ENST00000520630 ASB2Q96Q27 587 aa9.96□□□□□ -0.82
CSMD1-209ENST00000520630 USP44Q9H0E7 712 aa9.96□□□□□ -0.82
CSMD1-209ENST00000520630 EMILIN3Q9NT22 766 aa9.96□□□□□ -0.82
CSMD1-209ENST00000520630 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.96□□□□□ -0.82
CSMD1-209ENST00000520630 MROH7-TTC4A0A0A0MT08 1334 aa9.96□□□□□ -0.82
CSMD1-209ENST00000520630 BAZ2AQ9UIF9 1905 aaKnown RBP9.95□□□□□ -0.82
CSMD1-209ENST00000520630 TRIP12Q14669 1992 aaPredicted RBP9.95□□□□□ -0.82
CSMD1-209ENST00000520630 HOXC6P09630 235 aa9.95□□□□□ -0.82
CSMD1-209ENST00000520630 DNAJB2P25686 324 aa9.95□□□□□ -0.82
CSMD1-209ENST00000520630 CYP2C19P33261 490 aa9.95□□□□□ -0.82
CSMD1-209ENST00000520630 CACNB1Q02641 598 aaPredicted RBP9.95□□□□□ -0.82
CSMD1-209ENST00000520630 RASGRF1Q13972 1273 aa9.95□□□□□ -0.82
CSMD1-209ENST00000520630 PDE3AQ14432 1141 aa9.95□□□□□ -0.82
CSMD1-209ENST00000520630 ANO1Q5XXA6 986 aa9.95□□□□□ -0.82
CSMD1-209ENST00000520630 TRMT2AQ8IZ69 625 aaKnown RBP9.95□□□□□ -0.82
CSMD1-209ENST00000520630 EDC3Q96F86 508 aaKnown RBP9.95□□□□□ -0.82
CSMD1-209ENST00000520630 CDCA7LQ96GN5 454 aa9.95□□□□□ -0.82
CSMD1-209ENST00000520630 TBC1D2Q9BYX2 928 aa9.95□□□□□ -0.82
CSMD1-209ENST00000520630 ZNF576Q9H609 170 aa9.95□□□□□ -0.82
CSMD1-209ENST00000520630 PRDM5Q9NQX1 630 aaPredicted RBP9.95□□□□□ -0.82
CSMD1-209ENST00000520630 TET1Q8NFU7 2136 aa9.94□□□□□ -0.82
CSMD1-209ENST00000520630 COL4A4P53420 1690 aaPredicted RBP9.94□□□□□ -0.82
CSMD1-209ENST00000520630 PTPREP23469 700 aa9.94□□□□□ -0.82
CSMD1-209ENST00000520630 PBX2P40425 430 aa9.94□□□□□ -0.82
CSMD1-209ENST00000520630 IRX3P78415 501 aaPredicted RBP9.94□□□□□ -0.82
CSMD1-209ENST00000520630 MECOMQ03112 1051 aa9.94□□□□□ -0.82
CSMD1-209ENST00000520630 C1orf53Q5VUE5 145 aa9.94□□□□□ -0.82
CSMD1-209ENST00000520630 CCDC102BQ68D86 513 aa9.94□□□□□ -0.82
CSMD1-209ENST00000520630 ATXN2LQ8WWM7 1075 aaKnown RBP9.94□□□□□ -0.82
CSMD1-209ENST00000520630 PAGR1Q9BTK6 254 aa9.94□□□□□ -0.82
CSMD1-209ENST00000520630 BTBD7Q9P203 1132 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms