RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 SHROOM1Q2M3G4 852 aaPredicted RBP19.56■□□□□ 0.72
IGHV3-42-201ENST00000520410 CRNKL1Q9BZJ0 848 aaKnown RBP19.56■□□□□ 0.72
IGHV3-42-201ENST00000520410 PTPRFP10586 1907 aa19.56■□□□□ 0.72
IGHV3-42-201ENST00000520410 CDK5RAP2Q96SN8 1893 aa19.56■□□□□ 0.72
IGHV3-42-201ENST00000520410 FOCADQ5VW36 1801 aa19.55■□□□□ 0.72
IGHV3-42-201ENST00000520410 ZNF532Q9HCE3 1301 aa19.55■□□□□ 0.72
IGHV3-42-201ENST00000520410 GH2P01242 217 aa19.55■□□□□ 0.72
IGHV3-42-201ENST00000520410 EDC3Q96F86 508 aaKnown RBP19.55■□□□□ 0.72
IGHV3-42-201ENST00000520410 ASCC2Q9H1I8 757 aaPredicted RBP19.55■□□□□ 0.72
IGHV3-42-201ENST00000520410 SERPINB13Q9UIV8 391 aa19.55■□□□□ 0.72
IGHV3-42-201ENST00000520410 RBBP6Q7Z6E9 1792 aaKnown RBP19.55■□□□□ 0.72
IGHV3-42-201ENST00000520410 USP17L10C9JJH3 530 aa19.54■□□□□ 0.72
IGHV3-42-201ENST00000520410 ADCY3O60266 1144 aa19.54■□□□□ 0.72
IGHV3-42-201ENST00000520410 FLT3LGP49771 235 aa19.54■□□□□ 0.72
IGHV3-42-201ENST00000520410 BACE1P56817 501 aa19.54■□□□□ 0.72
IGHV3-42-201ENST00000520410 PDE3AQ14432 1141 aa19.54■□□□□ 0.72
IGHV3-42-201ENST00000520410 CCAR1Q8IX12 1150 aaKnown RBP19.54■□□□□ 0.72
IGHV3-42-201ENST00000520410 SLAIN1Q8ND83 568 aa19.54■□□□□ 0.72
IGHV3-42-201ENST00000520410 LRRCC1Q9C099 1032 aa19.54■□□□□ 0.72
IGHV3-42-201ENST00000520410 RNF208Q9H0X6 261 aa19.54■□□□□ 0.72
IGHV3-42-201ENST00000520410 CWC22Q9HCG8 908 aaKnown RBP19.54■□□□□ 0.72
IGHV3-42-201ENST00000520410 CABP5Q9NP86 173 aa19.54■□□□□ 0.72
IGHV3-42-201ENST00000520410 PAG1Q9NWQ8 432 aa19.54■□□□□ 0.72
IGHV3-42-201ENST00000520410 MCM9Q9NXL9 1143 aa19.54■□□□□ 0.72
IGHV3-42-201ENST00000520410 LOC285556D6RIA3 1793 aa19.54■□□□□ 0.72
IGHV3-42-201ENST00000520410 MPHOSPH10O00566 681 aaKnown RBP19.53■□□□□ 0.72
IGHV3-42-201ENST00000520410 SMARCA5O60264 1052 aaPredicted RBP19.53■□□□□ 0.72
IGHV3-42-201ENST00000520410 CCL5P13501 91 aa19.53■□□□□ 0.72
IGHV3-42-201ENST00000520410 ELNP15502 786 aa19.53■□□□□ 0.72
IGHV3-42-201ENST00000520410 GCLCP48506 637 aaPredicted RBP19.53■□□□□ 0.72
IGHV3-42-201ENST00000520410 JAG1P78504 1218 aa19.53■□□□□ 0.72
IGHV3-42-201ENST00000520410 FAM110CQ1W6H9 321 aa19.53■□□□□ 0.72
IGHV3-42-201ENST00000520410 CERKLQ49MI3 558 aaPredicted RBP19.53■□□□□ 0.72
IGHV3-42-201ENST00000520410 WDR18Q9BV38 432 aa19.53■□□□□ 0.72
IGHV3-42-201ENST00000520410 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.53■□□□□ 0.72
IGHV3-42-201ENST00000520410 MYH1P12882 1939 aa19.53■□□□□ 0.72
IGHV3-42-201ENST00000520410 C19orf81C9J6K1 198 aa19.52■□□□□ 0.72
IGHV3-42-201ENST00000520410 ABCB5Q2M3G0 1257 aa19.52■□□□□ 0.72
IGHV3-42-201ENST00000520410 SH3D19Q5HYK7 790 aa19.52■□□□□ 0.72
IGHV3-42-201ENST00000520410 TMED8Q6PL24 325 aaPredicted RBP19.52■□□□□ 0.72
IGHV3-42-201ENST00000520410 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.52■□□□□ 0.72
IGHV3-42-201ENST00000520410 SDR42E1Q8WUS8 393 aa19.52■□□□□ 0.72
IGHV3-42-201ENST00000520410 RIOK1Q9BRS2 568 aaKnown RBP19.52■□□□□ 0.72
IGHV3-42-201ENST00000520410 PAGR1Q9BTK6 254 aa19.52■□□□□ 0.72
IGHV3-42-201ENST00000520410 ARMT1Q9H993 441 aa19.52■□□□□ 0.72
IGHV3-42-201ENST00000520410 GINM1Q9NU53 330 aa19.52■□□□□ 0.72
IGHV3-42-201ENST00000520410 NAV1Q8NEY1 1877 aa19.52■□□□□ 0.71
IGHV3-42-201ENST00000520410 USP17L2Q6R6M4 530 aa19.51■□□□□ 0.71
IGHV3-42-201ENST00000520410 LCORLQ8N3X6 602 aa19.51■□□□□ 0.71
IGHV3-42-201ENST00000520410 MGAMO43451 1857 aa19.51■□□□□ 0.71
IGHV3-42-201ENST00000520410 MBD4O95243 580 aa19.5■□□□□ 0.71
IGHV3-42-201ENST00000520410 AMOTL1Q8IY63 956 aa19.5■□□□□ 0.71
IGHV3-42-201ENST00000520410 NKX2-3Q8TAU0 364 aa19.5■□□□□ 0.71
IGHV3-42-201ENST00000520410 DDRGK1Q96HY6 314 aa19.5■□□□□ 0.71
IGHV3-42-201ENST00000520410 GPATCH3Q96I76 525 aa19.5■□□□□ 0.71
IGHV3-42-201ENST00000520410 EHD4Q9H223 541 aa19.5■□□□□ 0.71
IGHV3-42-201ENST00000520410 INHAP05111 366 aa19.49■□□□□ 0.71
IGHV3-42-201ENST00000520410 ATP5JP18859 108 aa19.49■□□□□ 0.71
IGHV3-42-201ENST00000520410 PLCD1P51178 756 aa19.49■□□□□ 0.71
IGHV3-42-201ENST00000520410 METTL16Q86W50 562 aaKnown RBP19.49■□□□□ 0.71
IGHV3-42-201ENST00000520410 YTHDC1Q96MU7 727 aaKnown RBP19.49■□□□□ 0.71
IGHV3-42-201ENST00000520410 P2RX7Q99572 595 aaKnown RBP19.49■□□□□ 0.71
IGHV3-42-201ENST00000520410 HERVK_113P62684 666 aa19.48■□□□□ 0.71
IGHV3-42-201ENST00000520410 SLFNL1Q499Z3 407 aa19.48■□□□□ 0.71
IGHV3-42-201ENST00000520410 UNC93B1Q9H1C4 597 aa19.48■□□□□ 0.71
IGHV3-42-201ENST00000520410 PEX10O60683 326 aa19.47■□□□□ 0.71
IGHV3-42-201ENST00000520410 ADD2P35612 726 aa19.47■□□□□ 0.71
IGHV3-42-201ENST00000520410 USP14P54578 494 aa19.47■□□□□ 0.71
IGHV3-42-201ENST00000520410 WDR78Q5VTH9 848 aa19.47■□□□□ 0.71
IGHV3-42-201ENST00000520410 ZSCAN25Q6NSZ9 544 aa19.47■□□□□ 0.71
IGHV3-42-201ENST00000520410 TATDN1Q6P1N9 297 aa19.47■□□□□ 0.71
IGHV3-42-201ENST00000520410 HAUS7Q99871 368 aa19.47■□□□□ 0.71
IGHV3-42-201ENST00000520410 TNRC18O15417 2968 aaPredicted RBP19.47■□□□□ 0.71
IGHV3-42-201ENST00000520410 TCRBV5S4A2TA0A5A2 114 aa19.46■□□□□ 0.71
IGHV3-42-201ENST00000520410 CYP2D6P10635 497 aa19.46■□□□□ 0.71
IGHV3-42-201ENST00000520410 SHMT1P34896 483 aa19.46■□□□□ 0.71
IGHV3-42-201ENST00000520410 GPRC5AQ8NFJ5 357 aa19.46■□□□□ 0.71
IGHV3-42-201ENST00000520410 DPF3Q92784 378 aa19.46■□□□□ 0.71
IGHV3-42-201ENST00000520410 EMILIN3Q9NT22 766 aa19.46■□□□□ 0.71
IGHV3-42-201ENST00000520410 PRKAB2O43741 272 aa19.45■□□□□ 0.7
IGHV3-42-201ENST00000520410 TFRCP02786 760 aaKnown RBP19.45■□□□□ 0.7
IGHV3-42-201ENST00000520410 GJB1P08034 283 aa19.45■□□□□ 0.7
IGHV3-42-201ENST00000520410 CYP2B6P20813 491 aa19.45■□□□□ 0.7
IGHV3-42-201ENST00000520410 HOXA7P31268 230 aaPredicted RBP19.45■□□□□ 0.7
IGHV3-42-201ENST00000520410 IRF5Q13568 498 aa19.45■□□□□ 0.7
IGHV3-42-201ENST00000520410 SEPT2Q15019 361 aa19.45■□□□□ 0.7
IGHV3-42-201ENST00000520410 SAMD1Q6SPF0 538 aaPredicted RBP19.45■□□□□ 0.7
IGHV3-42-201ENST00000520410 PXYLP1Q8TE99 480 aa19.45■□□□□ 0.7
IGHV3-42-201ENST00000520410 U2AF1L4Q8WU68 220 aaKnown RBP19.45■□□□□ 0.7
IGHV3-42-201ENST00000520410 GCC1Q96CN9 775 aa19.45■□□□□ 0.7
IGHV3-42-201ENST00000520410 SHISA4Q96DD7 197 aa19.45■□□□□ 0.7
IGHV3-42-201ENST00000520410 DCP1AQ9NPI6 582 aaPredicted RBP19.45■□□□□ 0.7
IGHV3-42-201ENST00000520410 ECHDC1Q9NTX5 307 aa19.45■□□□□ 0.7
IGHV3-42-201ENST00000520410 SLC4A4Q9Y6R1 1079 aa19.45■□□□□ 0.7
IGHV3-42-201ENST00000520410 USP17L15C9J2P7 530 aa19.44■□□□□ 0.7
IGHV3-42-201ENST00000520410 USP17L13C9JLJ4 530 aa19.44■□□□□ 0.7
IGHV3-42-201ENST00000520410 USP17L11C9JVI0 530 aa19.44■□□□□ 0.7
IGHV3-42-201ENST00000520410 USP17L18D6R9N7 530 aa19.44■□□□□ 0.7
IGHV3-42-201ENST00000520410 USP17L22D6RA61 530 aa19.44■□□□□ 0.7
IGHV3-42-201ENST00000520410 USP17L17D6RBQ6 530 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms