RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 ZNF296Q8WUU4 475 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P41-201ENST00000520234 JARID2Q92833 1246 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P41-201ENST00000520234 GSX1Q9H4S2 264 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P41-201ENST00000520234 ADAMTS1Q9UHI8 967 aa5.38□□□□□ -1.55
HMGB1P41-201ENST00000520234 PPP1R9AQ9ULJ8 1098 aa5.38□□□□□ -1.55
HMGB1P41-201ENST00000520234 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P41-201ENST00000520234 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P41-201ENST00000520234 FAM221AA4D161 298 aa5.37□□□□□ -1.55
HMGB1P41-201ENST00000520234 F6X3S4 739 aa5.37□□□□□ -1.55
HMGB1P41-201ENST00000520234 TMPRSS2O15393 492 aa5.37□□□□□ -1.55
HMGB1P41-201ENST00000520234 PSPNO60542 156 aa5.37□□□□□ -1.55
HMGB1P41-201ENST00000520234 CILPO75339 1184 aa5.37□□□□□ -1.55
HMGB1P41-201ENST00000520234 BPNT1O95861 308 aa5.37□□□□□ -1.55
HMGB1P41-201ENST00000520234 F13A1P00488 732 aa5.37□□□□□ -1.55
HMGB1P41-201ENST00000520234 INHBBP09529 407 aa5.37□□□□□ -1.55
HMGB1P41-201ENST00000520234 DRD2P14416 443 aa5.37□□□□□ -1.55
HMGB1P41-201ENST00000520234 GARTP22102 1010 aa5.37□□□□□ -1.55
HMGB1P41-201ENST00000520234 ERCC5P28715 1186 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P41-201ENST00000520234 USP11P51784 963 aa5.37□□□□□ -1.55
HMGB1P41-201ENST00000520234 RPL6Q02878 288 aaKnown RBP5.37□□□□□ -1.55
HMGB1P41-201ENST00000520234 FAM160A1Q05DH4 1040 aa5.37□□□□□ -1.55
HMGB1P41-201ENST00000520234 PTPN11Q06124 597 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P41-201ENST00000520234 ZNF394Q53GI3 561 aa5.37□□□□□ -1.55
HMGB1P41-201ENST00000520234 FBXL19Q6PCT2 694 aa5.37□□□□□ -1.55
HMGB1P41-201ENST00000520234 PAOXQ6QHF9 649 aa5.37□□□□□ -1.55
HMGB1P41-201ENST00000520234 DYMQ7RTS9 669 aa5.37□□□□□ -1.55
HMGB1P41-201ENST00000520234 BCL7CQ8WUZ0 217 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P41-201ENST00000520234 ELMO3Q96BJ8 720 aa5.37□□□□□ -1.55
HMGB1P41-201ENST00000520234 SPON2Q9BUD6 331 aa5.37□□□□□ -1.55
HMGB1P41-201ENST00000520234 YIPF2Q9BWQ6 316 aa5.37□□□□□ -1.55
HMGB1P41-201ENST00000520234 LRRC3Q9BY71 257 aa5.37□□□□□ -1.55
HMGB1P41-201ENST00000520234 FAM53CQ9NYF3 392 aa5.37□□□□□ -1.55
HMGB1P41-201ENST00000520234 AP4E1Q9UPM8 1137 aa5.37□□□□□ -1.55
HMGB1P41-201ENST00000520234 FANCGO15287 622 aa5.36□□□□□ -1.55
HMGB1P41-201ENST00000520234 ASPAP45381 313 aa5.36□□□□□ -1.55
HMGB1P41-201ENST00000520234 RACK1P63244 317 aaKnown RBP5.36□□□□□ -1.55
HMGB1P41-201ENST00000520234 RING1Q06587 406 aa5.36□□□□□ -1.55
HMGB1P41-201ENST00000520234 RAD51AP2Q09MP3 1159 aa5.36□□□□□ -1.55
HMGB1P41-201ENST00000520234 MPP2Q14168 576 aa5.36□□□□□ -1.55
HMGB1P41-201ENST00000520234 BNC2Q6ZN30 1099 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P41-201ENST00000520234 CYFIP1Q7L576 1253 aa5.36□□□□□ -1.55
HMGB1P41-201ENST00000520234 RNF214Q8ND24 703 aa5.36□□□□□ -1.55
HMGB1P41-201ENST00000520234 SPATA32Q96LK8 384 aa5.36□□□□□ -1.55
HMGB1P41-201ENST00000520234 FANCD2OSQ96PS1 177 aa5.36□□□□□ -1.55
HMGB1P41-201ENST00000520234 NT5C1AQ9BXI3 368 aa5.36□□□□□ -1.55
HMGB1P41-201ENST00000520234 CCSER2Q9H7U1 834 aa5.36□□□□□ -1.55
HMGB1P41-201ENST00000520234 PIDD1Q9HB75 910 aa5.36□□□□□ -1.55
HMGB1P41-201ENST00000520234 RC3H2Q9HBD1 1191 aaKnown RBP5.36□□□□□ -1.55
HMGB1P41-201ENST00000520234 DISC1Q9NRI5 854 aa5.36□□□□□ -1.55
HMGB1P41-201ENST00000520234 ZC3H7BQ9UGR2 993 aaKnown RBP5.36□□□□□ -1.55
HMGB1P41-201ENST00000520234 PCDHGB7Q9Y5F8 929 aa5.36□□□□□ -1.55
HMGB1P41-201ENST00000520234 ACTL7BQ9Y614 415 aa5.36□□□□□ -1.55
HMGB1P41-201ENST00000520234 FAM95CA0A1B0GW59 222 aa5.35□□□□□ -1.55
HMGB1P41-201ENST00000520234 GFRA2O00451 464 aa5.35□□□□□ -1.55
HMGB1P41-201ENST00000520234 INPP5AQ14642 412 aa5.35□□□□□ -1.55
HMGB1P41-201ENST00000520234 CWF19L2Q2TBE0 894 aaKnown RBP5.35□□□□□ -1.55
HMGB1P41-201ENST00000520234 WIPI1Q5MNZ9 446 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P41-201ENST00000520234 LRFN4Q6PJG9 635 aa5.35□□□□□ -1.55
HMGB1P41-201ENST00000520234 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P41-201ENST00000520234 ZAR1Q86SH2 424 aa5.35□□□□□ -1.55
HMGB1P41-201ENST00000520234 AMIGO3Q86WK7 504 aa5.35□□□□□ -1.55
HMGB1P41-201ENST00000520234 WFDC3Q8IUB2 231 aa5.35□□□□□ -1.55
HMGB1P41-201ENST00000520234 SHISA5Q8N114 240 aa5.35□□□□□ -1.55
HMGB1P41-201ENST00000520234 KCT2Q8NC54 265 aa5.35□□□□□ -1.55
HMGB1P41-201ENST00000520234 PLPPR2Q96GM1 343 aa5.35□□□□□ -1.55
HMGB1P41-201ENST00000520234 PICK1Q9NRD5 415 aa5.35□□□□□ -1.55
HMGB1P41-201ENST00000520234 DCDC2CA8MYV0 355 aa5.34□□□□□ -1.55
HMGB1P41-201ENST00000520234 APOBRQ0VD83 1088 aa5.34□□□□□ -1.55
HMGB1P41-201ENST00000520234 MAP7Q14244 749 aa5.34□□□□□ -1.55
HMGB1P41-201ENST00000520234 NFKBIBQ15653 356 aa5.34□□□□□ -1.55
HMGB1P41-201ENST00000520234 ZNF574Q6ZN55 896 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P41-201ENST00000520234 REC114Q7Z4M0 266 aa5.34□□□□□ -1.55
HMGB1P41-201ENST00000520234 C12orf40Q86WS4 652 aa5.34□□□□□ -1.55
HMGB1P41-201ENST00000520234 ZNF507Q8TCN5 953 aa5.34□□□□□ -1.55
HMGB1P41-201ENST00000520234 EZH1Q92800 747 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P41-201ENST00000520234 TBC1D32Q96NH3 1257 aa5.34□□□□□ -1.55
HMGB1P41-201ENST00000520234 ACSS3Q9H6R3 686 aa5.34□□□□□ -1.55
HMGB1P41-201ENST00000520234 FAM105AQ9NUU6 356 aa5.34□□□□□ -1.55
HMGB1P41-201ENST00000520234 PDE4BQ07343 736 aa5.33□□□□□ -1.56
HMGB1P41-201ENST00000520234 GNL2Q13823 731 aaKnown RBP5.33□□□□□ -1.56
HMGB1P41-201ENST00000520234 COL9A2Q14055 689 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P41-201ENST00000520234 TTLL4Q14679 1199 aa5.33□□□□□ -1.56
HMGB1P41-201ENST00000520234 ZBTB37Q5TC79 503 aa5.33□□□□□ -1.56
HMGB1P41-201ENST00000520234 DUSP27Q5VZP5 1158 aa5.33□□□□□ -1.56
HMGB1P41-201ENST00000520234 CDPF1Q6NVV7 123 aa5.33□□□□□ -1.56
HMGB1P41-201ENST00000520234 CDC37L1Q7L3B6 337 aa5.33□□□□□ -1.56
HMGB1P41-201ENST00000520234 SMYD4Q8IYR2 804 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P41-201ENST00000520234 NKD1Q969G9 470 aa5.33□□□□□ -1.56
HMGB1P41-201ENST00000520234 EAF1Q96JC9 268 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P41-201ENST00000520234 WNT10AQ9GZT5 417 aa5.33□□□□□ -1.56
HMGB1P41-201ENST00000520234 ACBD3Q9H3P7 528 aa5.33□□□□□ -1.56
HMGB1P41-201ENST00000520234 UBP1Q9NZI7 540 aa5.33□□□□□ -1.56
HMGB1P41-201ENST00000520234 PCOLCE2Q9UKZ9 415 aa5.33□□□□□ -1.56
HMGB1P41-201ENST00000520234 INPP5FQ9Y2H2 1132 aa5.33□□□□□ -1.56
HMGB1P41-201ENST00000520234 CSADQ9Y600 493 aa5.33□□□□□ -1.56
HMGB1P41-201ENST00000520234 PRR36Q9H6K5 1346 aa5.32□□□□□ -1.56
HMGB1P41-201ENST00000520234 FUT4P22083 530 aa5.32□□□□□ -1.56
HMGB1P41-201ENST00000520234 ADMP35318 185 aa5.32□□□□□ -1.56
HMGB1P41-201ENST00000520234 GJA8P48165 433 aa5.32□□□□□ -1.56
HMGB1P41-201ENST00000520234 ZC3H6P61129 1189 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms