RNA–Protein interactions for RNA: ENST00000520126.1

CLK4-204, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 1,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-204ENST00000520126 SNAPC2Q13487 334 aa20.54■□□□□ 0.88
CLK4-204ENST00000520126 SHROOM1Q2M3G4 852 aaPredicted RBP20.54■□□□□ 0.88
CLK4-204ENST00000520126 EPB41L4AQ9HCS5 686 aaPredicted RBP20.54■□□□□ 0.88
CLK4-204ENST00000520126 CABP5Q9NP86 173 aa20.54■□□□□ 0.88
CLK4-204ENST00000520126 BAZ2AQ9UIF9 1905 aaKnown RBP20.54■□□□□ 0.88
CLK4-204ENST00000520126 FOXN1O15353 648 aa20.53■□□□□ 0.88
CLK4-204ENST00000520126 GH2P01242 217 aa20.53■□□□□ 0.88
CLK4-204ENST00000520126 MFAP1P55081 439 aaKnown RBP20.53■□□□□ 0.88
CLK4-204ENST00000520126 RAB3GAP1Q15042 981 aa20.53■□□□□ 0.88
CLK4-204ENST00000520126 VPS53Q5VIR6 699 aa20.53■□□□□ 0.88
CLK4-204ENST00000520126 GIMAP6Q6P9H5 292 aa20.53■□□□□ 0.88
CLK4-204ENST00000520126 ZNF589Q86UQ0 364 aaPredicted RBP20.53■□□□□ 0.88
CLK4-204ENST00000520126 METTL16Q86W50 562 aaKnown RBP20.53■□□□□ 0.88
CLK4-204ENST00000520126 CCDC171Q6TFL3 1326 aa20.53■□□□□ 0.88
CLK4-204ENST00000520126 USP17L5A8MUK1 530 aa20.53■□□□□ 0.88
CLK4-204ENST00000520126 ASNSP08243 561 aa20.53■□□□□ 0.88
CLK4-204ENST00000520126 CETPP11597 493 aa20.53■□□□□ 0.88
CLK4-204ENST00000520126 SHMT1P34896 483 aa20.53■□□□□ 0.88
CLK4-204ENST00000520126 TM4SF4P48230 202 aa20.53■□□□□ 0.88
CLK4-204ENST00000520126 INHBEP58166 350 aa20.53■□□□□ 0.88
CLK4-204ENST00000520126 ABCB5Q2M3G0 1257 aa20.53■□□□□ 0.88
CLK4-204ENST00000520126 OTUD7BQ6GQQ9 843 aa20.53■□□□□ 0.88
CLK4-204ENST00000520126 GADL1Q6ZQY3 521 aa20.53■□□□□ 0.88
CLK4-204ENST00000520126 TICAM2Q86XR7 235 aa20.53■□□□□ 0.88
CLK4-204ENST00000520126 MKNK2Q9HBH9 465 aa20.53■□□□□ 0.88
CLK4-204ENST00000520126 RNF186Q9NXI6 227 aa20.53■□□□□ 0.88
CLK4-204ENST00000520126 SWAP70Q9UH65 585 aa20.53■□□□□ 0.88
CLK4-204ENST00000520126 SIPA1L1O43166 1804 aa20.52■□□□□ 0.88
CLK4-204ENST00000520126 CDK8P49336 464 aa20.52■□□□□ 0.87
CLK4-204ENST00000520126 JAG1P78504 1218 aa20.52■□□□□ 0.87
CLK4-204ENST00000520126 SPP2Q13103 211 aa20.52■□□□□ 0.87
CLK4-204ENST00000520126 TATDN1Q6P1N9 297 aa20.52■□□□□ 0.87
CLK4-204ENST00000520126 IFNL1Q8IU54 200 aa20.52■□□□□ 0.87
CLK4-204ENST00000520126 AS3MTQ9HBK9 375 aa20.52■□□□□ 0.87
CLK4-204ENST00000520126 ZBTB21Q9ULJ3 1066 aa20.52■□□□□ 0.87
CLK4-204ENST00000520126 TBC1D8O95759 1140 aa20.51■□□□□ 0.87
CLK4-204ENST00000520126 GABPAQ06546 454 aa20.51■□□□□ 0.87
CLK4-204ENST00000520126 SBK1Q52WX2 424 aa20.51■□□□□ 0.87
CLK4-204ENST00000520126 RUFY2Q8WXA3 655 aa20.51■□□□□ 0.87
CLK4-204ENST00000520126 BRI3BPQ8WY22 251 aa20.51■□□□□ 0.87
CLK4-204ENST00000520126 MS4A4AQ96JQ5 239 aa20.51■□□□□ 0.87
CLK4-204ENST00000520126 AFG3L2Q9Y4W6 797 aa20.51■□□□□ 0.87
CLK4-204ENST00000520126 IGF2BP3O00425 579 aaKnown RBP eCLIP20.5■□□□□ 0.87
CLK4-204ENST00000520126 SLC3A2P08195 630 aaKnown RBP20.5■□□□□ 0.87
CLK4-204ENST00000520126 HSPD1P10809 573 aaKnown RBP20.5■□□□□ 0.87
CLK4-204ENST00000520126 CTCFP49711 727 aaPredicted RBP20.5■□□□□ 0.87
CLK4-204ENST00000520126 ZNF280CQ8ND82 737 aa20.5■□□□□ 0.87
CLK4-204ENST00000520126 THSD7BQ9C0I4 1608 aa20.49■□□□□ 0.87
CLK4-204ENST00000520126 DOCK1Q14185 1865 aa20.49■□□□□ 0.87
CLK4-204ENST00000520126 CXCL11O14625 94 aa20.49■□□□□ 0.87
CLK4-204ENST00000520126 CA12O43570 354 aa20.49■□□□□ 0.87
CLK4-204ENST00000520126 PRDM1O75626 825 aa20.49■□□□□ 0.87
CLK4-204ENST00000520126 CHMLP26374 656 aa20.49■□□□□ 0.87
CLK4-204ENST00000520126 LBX1P52954 281 aa20.49■□□□□ 0.87
CLK4-204ENST00000520126 PPARAQ07869 468 aa20.49■□□□□ 0.87
CLK4-204ENST00000520126 ZYXQ15942 572 aaKnown RBP20.49■□□□□ 0.87
CLK4-204ENST00000520126 C16orf86Q6ZW13 317 aa20.49■□□□□ 0.87
CLK4-204ENST00000520126 FEZ1Q99689 392 aa20.49■□□□□ 0.87
CLK4-204ENST00000520126 PTPN18Q99952 460 aa20.49■□□□□ 0.87
CLK4-204ENST00000520126 ALDH1A1P00352 501 aa20.48■□□□□ 0.87
CLK4-204ENST00000520126 AKR1B1P15121 316 aa20.48■□□□□ 0.87
CLK4-204ENST00000520126 ATP2B2Q01814 1243 aa20.48■□□□□ 0.87
CLK4-204ENST00000520126 CTDSPL2Q05D32 466 aa20.48■□□□□ 0.87
CLK4-204ENST00000520126 SEPT2Q15019 361 aa20.48■□□□□ 0.87
CLK4-204ENST00000520126 ZNF444Q8N0Y2 327 aaPredicted RBP20.48■□□□□ 0.87
CLK4-204ENST00000520126 TOMM22Q9NS69 142 aa20.48■□□□□ 0.87
CLK4-204ENST00000520126 KCNH4Q9UQ05 1017 aa20.48■□□□□ 0.87
CLK4-204ENST00000520126 DDX60LQ5H9U9 1706 aaKnown RBP20.48■□□□□ 0.87
CLK4-204ENST00000520126 BTBD19C9JJ37 291 aa20.47■□□□□ 0.87
CLK4-204ENST00000520126 FGAP02671 866 aa20.47■□□□□ 0.87
CLK4-204ENST00000520126 HMGCS2P54868 508 aa20.47■□□□□ 0.87
CLK4-204ENST00000520126 HAND2P61296 217 aa20.47■□□□□ 0.87
CLK4-204ENST00000520126 FAM43AQ8N2R8 423 aa20.47■□□□□ 0.87
CLK4-204ENST00000520126 ZNF287Q9HBT7 754 aa20.47■□□□□ 0.87
CLK4-204ENST00000520126 GINM1Q9NU53 330 aa20.47■□□□□ 0.87
CLK4-204ENST00000520126 TESPA1A2RU30 521 aaPredicted RBP20.46■□□□□ 0.87
CLK4-204ENST00000520126 FOXP2O15409 715 aa20.46■□□□□ 0.87
CLK4-204ENST00000520126 HSPA8P11142 646 aaKnown RBP20.46■□□□□ 0.87
CLK4-204ENST00000520126 PDE4BQ07343 736 aa20.46■□□□□ 0.87
CLK4-204ENST00000520126 DGKZQ13574 1117 aa20.46■□□□□ 0.87
CLK4-204ENST00000520126 MTMR2Q13614 643 aa20.46■□□□□ 0.87
CLK4-204ENST00000520126 TAF1CQ15572 869 aaPredicted RBP20.46■□□□□ 0.87
CLK4-204ENST00000520126 FASTKD5Q7L8L6 764 aaKnown RBP20.46■□□□□ 0.87
CLK4-204ENST00000520126 TBC1D2Q9BYX2 928 aa20.46■□□□□ 0.87
CLK4-204ENST00000520126 TMOD4Q9NZQ9 345 aa20.46■□□□□ 0.87
CLK4-204ENST00000520126 ATAD5Q96QE3 1844 aa20.45■□□□□ 0.86
CLK4-204ENST00000520126 A0A0G2JLL6 359 aaPredicted RBP20.45■□□□□ 0.86
CLK4-204ENST00000520126 USP17L10C9JJH3 530 aa20.45■□□□□ 0.86
CLK4-204ENST00000520126 BMP2KLQ5H9B9 411 aa20.45■□□□□ 0.86
CLK4-204ENST00000520126 TMEM179Q6ZVK1 233 aa20.45■□□□□ 0.86
CLK4-204ENST00000520126 PRRT2Q7Z6L0 340 aaPredicted RBP20.45■□□□□ 0.86
CLK4-204ENST00000520126 CCDC17Q96LX7 622 aa20.45■□□□□ 0.86
CLK4-204ENST00000520126 SAGE1Q9NXZ1 904 aa20.45■□□□□ 0.86
CLK4-204ENST00000520126 PDHXO00330 501 aa20.44■□□□□ 0.86
CLK4-204ENST00000520126 RAD21O60216 631 aa20.44■□□□□ 0.86
CLK4-204ENST00000520126 ALX1Q15699 326 aa20.44■□□□□ 0.86
CLK4-204ENST00000520126 RRP12Q5JTH9 1297 aaKnown RBP20.44■□□□□ 0.86
CLK4-204ENST00000520126 CLEC10AQ8IUN9 316 aa20.44■□□□□ 0.86
CLK4-204ENST00000520126 WDR18Q9BV38 432 aa20.44■□□□□ 0.86
CLK4-204ENST00000520126 IL25Q9H293 177 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms