RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 PRAMEF13Q5VWM6 474 aa9.94□□□□□ -0.82
PTPN12-213ENST00000519553 TBC1D32Q96NH3 1257 aa9.94□□□□□ -0.82
PTPN12-213ENST00000519553 C8orf37Q96NL8 207 aa9.94□□□□□ -0.82
PTPN12-213ENST00000519553 DPH2Q9BQC3 489 aaPredicted RBP9.94□□□□□ -0.82
PTPN12-213ENST00000519553 ZNRF3Q9ULT6 936 aa9.94□□□□□ -0.82
PTPN12-213ENST00000519553 PPT2Q9UMR5 302 aa9.94□□□□□ -0.82
PTPN12-213ENST00000519553 CST3P01034 146 aaPredicted RBP9.93□□□□□ -0.82
PTPN12-213ENST00000519553 F13BP05160 661 aa9.93□□□□□ -0.82
PTPN12-213ENST00000519553 ATF4P18848 351 aaPredicted RBP9.93□□□□□ -0.82
PTPN12-213ENST00000519553 SLC6A19Q695T7 634 aa9.93□□□□□ -0.82
PTPN12-213ENST00000519553 FOXQ1Q9C009 403 aa9.93□□□□□ -0.82
PTPN12-213ENST00000519553 SEMA6BQ9H3T3 888 aa9.93□□□□□ -0.82
PTPN12-213ENST00000519553 UPK3BL1B0FP48 263 aa9.92□□□□□ -0.82
PTPN12-213ENST00000519553 UPK3BL2E5RIL1 263 aa9.92□□□□□ -0.82
PTPN12-213ENST00000519553 GSC2O15499 205 aa9.92□□□□□ -0.82
PTPN12-213ENST00000519553 NASPP49321 788 aaPredicted RBP9.92□□□□□ -0.82
PTPN12-213ENST00000519553 NAALADL2Q58DX5 795 aa9.92□□□□□ -0.82
PTPN12-213ENST00000519553 PRSS36Q5K4E3 855 aa9.92□□□□□ -0.82
PTPN12-213ENST00000519553 SEC16BQ96JE7 1060 aa9.92□□□□□ -0.82
PTPN12-213ENST00000519553 KLHL3Q9UH77 587 aa9.92□□□□□ -0.82
PTPN12-213ENST00000519553 MEIS3P2A8K0S8 358 aa9.91□□□□□ -0.82
PTPN12-213ENST00000519553 LEFTY1O75610 366 aa9.91□□□□□ -0.82
PTPN12-213ENST00000519553 OVOS1Q6IE37 1185 aa9.91□□□□□ -0.82
PTPN12-213ENST00000519553 SLFN12Q8IYM2 578 aa9.91□□□□□ -0.82
PTPN12-213ENST00000519553 FBXL6Q8N531 539 aa9.91□□□□□ -0.82
PTPN12-213ENST00000519553 TOP6BLQ8N6T0 577 aa9.91□□□□□ -0.82
PTPN12-213ENST00000519553 SLC43A3Q8NBI5 491 aa9.91□□□□□ -0.82
PTPN12-213ENST00000519553 FAM13CQ8NE31 585 aa9.91□□□□□ -0.82
PTPN12-213ENST00000519553 DUSP23Q9BVJ7 150 aa9.91□□□□□ -0.82
PTPN12-213ENST00000519553 ANTXR1Q9H6X2 564 aa9.91□□□□□ -0.82
PTPN12-213ENST00000519553 PRDM10Q9NQV6 1147 aa9.91□□□□□ -0.82
PTPN12-213ENST00000519553 GMIPQ9P107 970 aa9.91□□□□□ -0.82
PTPN12-213ENST00000519553 SLC22A31A6NKX4 558 aa9.9□□□□□ -0.82
PTPN12-213ENST00000519553 FAM170BA6NMN3 283 aa9.9□□□□□ -0.82
PTPN12-213ENST00000519553 CHURC1-FNTBB4DL54 471 aa9.9□□□□□ -0.82
PTPN12-213ENST00000519553 FAM87AP0C7U9 286 aa9.9□□□□□ -0.82
PTPN12-213ENST00000519553 GNL2Q13823 731 aaKnown RBP9.9□□□□□ -0.82
PTPN12-213ENST00000519553 CCDC81Q6ZN84 652 aa9.9□□□□□ -0.82
PTPN12-213ENST00000519553 ZDHHC13Q8IUH4 622 aa9.9□□□□□ -0.82
PTPN12-213ENST00000519553 SHKBP1Q8TBC3 707 aa9.9□□□□□ -0.82
PTPN12-213ENST00000519553 K7ELQ4 463 aaPredicted RBP9.89□□□□□ -0.83
PTPN12-213ENST00000519553 SLITRK5O94991 958 aa9.89□□□□□ -0.83
PTPN12-213ENST00000519553 FGRP09769 529 aa9.89□□□□□ -0.83
PTPN12-213ENST00000519553 OGFOD3Q6PK18 319 aa9.89□□□□□ -0.83
PTPN12-213ENST00000519553 ZNF765Q7L2R6 523 aa9.89□□□□□ -0.83
PTPN12-213ENST00000519553 MFSD2AQ8NA29 543 aa9.89□□□□□ -0.83
PTPN12-213ENST00000519553 TMEM40Q8WWA1 233 aa9.89□□□□□ -0.83
PTPN12-213ENST00000519553 FERD3LQ96RJ6 166 aa9.89□□□□□ -0.83
PTPN12-213ENST00000519553 GMLQ99445 158 aa9.89□□□□□ -0.83
PTPN12-213ENST00000519553 YARSP54577 528 aaKnown RBP9.88□□□□□ -0.83
PTPN12-213ENST00000519553 SLC51AQ86UW1 340 aa9.88□□□□□ -0.83
PTPN12-213ENST00000519553 RBBP8NLQ8NC74 664 aaPredicted RBP9.88□□□□□ -0.83
PTPN12-213ENST00000519553 XAGE3Q8WTP9 111 aa9.88□□□□□ -0.83
PTPN12-213ENST00000519553 MIPEPQ99797 713 aa9.88□□□□□ -0.83
PTPN12-213ENST00000519553 WDR64B1ANS9 1081 aa9.87□□□□□ -0.83
PTPN12-213ENST00000519553 EOMESO95936 686 aa9.87□□□□□ -0.83
PTPN12-213ENST00000519553 IMPDH2P12268 514 aa9.87□□□□□ -0.83
PTPN12-213ENST00000519553 MLECQ14165 292 aa9.87□□□□□ -0.83
PTPN12-213ENST00000519553 CDCP2Q5VXM1 449 aa9.87□□□□□ -0.83
PTPN12-213ENST00000519553 CYB5D2Q8WUJ1 264 aa9.87□□□□□ -0.83
PTPN12-213ENST00000519553 ATG4CQ96DT6 458 aa9.87□□□□□ -0.83
PTPN12-213ENST00000519553 PRR19A6NJB7 356 aa9.86□□□□□ -0.83
PTPN12-213ENST00000519553 DNAJA1P31689 397 aaKnown RBP9.86□□□□□ -0.83
PTPN12-213ENST00000519553 ARSHQ5FYA8 562 aa9.86□□□□□ -0.83
PTPN12-213ENST00000519553 LETMD1Q6P1Q0 360 aa9.86□□□□□ -0.83
PTPN12-213ENST00000519553 FAM214BQ7L5A3 538 aa9.86□□□□□ -0.83
PTPN12-213ENST00000519553 LSRQ86X29 649 aaPredicted RBP9.86□□□□□ -0.83
PTPN12-213ENST00000519553 MCF2L2Q86YR7 1114 aa9.86□□□□□ -0.83
PTPN12-213ENST00000519553 DNAJB8Q8NHS0 232 aa9.86□□□□□ -0.83
PTPN12-213ENST00000519553 RIN3Q8TB24 985 aa9.86□□□□□ -0.83
PTPN12-213ENST00000519553 PPP1R13LQ8WUF5 828 aa9.86□□□□□ -0.83
PTPN12-213ENST00000519553 SHDQ96IW2 340 aa9.86□□□□□ -0.83
PTPN12-213ENST00000519553 SRRTQ9BXP5 876 aaKnown RBP9.86□□□□□ -0.83
PTPN12-213ENST00000519553 CNNM2Q9H8M5 875 aa9.86□□□□□ -0.83
PTPN12-213ENST00000519553 ADAM23O75077 832 aa9.85□□□□□ -0.83
PTPN12-213ENST00000519553 ARID5AQ03989 594 aa9.85□□□□□ -0.83
PTPN12-213ENST00000519553 LRRFIP1Q32MZ4 808 aaKnown RBP9.85□□□□□ -0.83
PTPN12-213ENST00000519553 NLRC3Q7RTR2 1065 aa9.85□□□□□ -0.83
PTPN12-213ENST00000519553 VPS37DQ86XT2 251 aa9.85□□□□□ -0.83
PTPN12-213ENST00000519553 GIMAP7Q8NHV1 300 aa9.85□□□□□ -0.83
PTPN12-213ENST00000519553 STRIP2Q9ULQ0 834 aa9.85□□□□□ -0.83
PTPN12-213ENST00000519553 NME1P15531 152 aaKnown RBP9.84□□□□□ -0.83
PTPN12-213ENST00000519553 GIPRP48546 466 aa9.84□□□□□ -0.83
PTPN12-213ENST00000519553 CYP27A1Q02318 531 aa9.84□□□□□ -0.83
PTPN12-213ENST00000519553 CPSF6Q16630 551 aaKnown RBP eCLIP9.84□□□□□ -0.83
PTPN12-213ENST00000519553 FBXW10Q5XX13 1052 aa9.84□□□□□ -0.83
PTPN12-213ENST00000519553 METTL22Q9BUU2 404 aaPredicted RBP9.84□□□□□ -0.83
PTPN12-213ENST00000519553 U3KQE9 123 aa9.84□□□□□ -0.83
PTPN12-213ENST00000519553 CNTNAP4Q9C0A0 1308 aa9.83□□□□□ -0.84
PTPN12-213ENST00000519553 RBAK-RBAKDNI3L0D1 243 aa9.83□□□□□ -0.84
PTPN12-213ENST00000519553 TNFRSF10CO14798 259 aa9.83□□□□□ -0.84
PTPN12-213ENST00000519553 ACRP10323 421 aa9.83□□□□□ -0.84
PTPN12-213ENST00000519553 POLR2BP30876 1174 aaKnown RBP9.83□□□□□ -0.84
PTPN12-213ENST00000519553 EIF6P56537 245 aaKnown RBP9.83□□□□□ -0.84
PTPN12-213ENST00000519553 HEXIM2Q96MH2 286 aaKnown RBP9.83□□□□□ -0.84
PTPN12-213ENST00000519553 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.83□□□□□ -0.847e-12■□□□□ 8.9
PTPN12-213ENST00000519553 OSBPL1AQ9BXW6 950 aa9.83□□□□□ -0.84
PTPN12-213ENST00000519553 ATG3Q9NT62 314 aa9.83□□□□□ -0.84
PTPN12-213ENST00000519553 RGS13O14921 159 aa9.82□□□□□ -0.84
PTPN12-213ENST00000519553 UBOX5O94941 541 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms