RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 MCM9Q9NXL9 1143 aa9.07□□□□□ -0.96
SDCBP-206ENST00000519115 PI4KBQ9UBF8 816 aa9.07□□□□□ -0.96
SDCBP-206ENST00000519115 HERC5Q9UII4 1024 aaKnown RBP9.07□□□□□ -0.96
SDCBP-206ENST00000519115 CYP2D7A0A087X1C5 515 aa9.06□□□□□ -0.96
SDCBP-206ENST00000519115 CCL15-CCL14A0A0B4J2E2 113 aa9.06□□□□□ -0.96
SDCBP-206ENST00000519115 IGF2BP3O00425 579 aaKnown RBP eCLIP9.06□□□□□ -0.96
SDCBP-206ENST00000519115 IRF6O14896 467 aa9.06□□□□□ -0.96
SDCBP-206ENST00000519115 GPAA1O43292 621 aa9.06□□□□□ -0.96
SDCBP-206ENST00000519115 CA12O43570 354 aa9.06□□□□□ -0.96
SDCBP-206ENST00000519115 TBC1D12O60347 775 aa9.06□□□□□ -0.96
SDCBP-206ENST00000519115 POLR3DP05423 398 aaPredicted RBP9.06□□□□□ -0.96
SDCBP-206ENST00000519115 MFAP1P55081 439 aaKnown RBP9.06□□□□□ -0.96
SDCBP-206ENST00000519115 PPIL2Q13356 520 aa9.06□□□□□ -0.96
SDCBP-206ENST00000519115 CCL15Q16663 113 aa9.06□□□□□ -0.96
SDCBP-206ENST00000519115 BRI3BPQ8WY22 251 aa9.06□□□□□ -0.96
SDCBP-206ENST00000519115 DDRGK1Q96HY6 314 aa9.06□□□□□ -0.96
SDCBP-206ENST00000519115 MS4A4AQ96JQ5 239 aa9.06□□□□□ -0.96
SDCBP-206ENST00000519115 USP26Q9BXU7 913 aa9.06□□□□□ -0.96
SDCBP-206ENST00000519115 SLC4A4Q9Y6R1 1079 aa9.06□□□□□ -0.96
SDCBP-206ENST00000519115 LOC285556D6RIA3 1793 aa9.06□□□□□ -0.96
SDCBP-206ENST00000519115 SMIM22K7EJ46 135 aa9.05□□□□□ -0.96
SDCBP-206ENST00000519115 SGSM2O43147 1006 aa9.05□□□□□ -0.96
SDCBP-206ENST00000519115 CTNND1O60716 968 aaKnown RBP9.05□□□□□ -0.96
SDCBP-206ENST00000519115 GDF11O95390 407 aa9.05□□□□□ -0.96
SDCBP-206ENST00000519115 PTPRAP18433 802 aa9.05□□□□□ -0.96
SDCBP-206ENST00000519115 ANP32AP39687 249 aaKnown RBP9.05□□□□□ -0.96
SDCBP-206ENST00000519115 CAP2P40123 477 aa9.05□□□□□ -0.96
SDCBP-206ENST00000519115 TM4SF4P48230 202 aa9.05□□□□□ -0.96
SDCBP-206ENST00000519115 PLCD1P51178 756 aa9.05□□□□□ -0.96
SDCBP-206ENST00000519115 GTF2A2P52657 109 aa9.05□□□□□ -0.96
SDCBP-206ENST00000519115 JAG1P78504 1218 aa9.05□□□□□ -0.96
SDCBP-206ENST00000519115 PPATQ06203 517 aa9.05□□□□□ -0.96
SDCBP-206ENST00000519115 ZMYM1Q5SVZ6 1142 aa9.05□□□□□ -0.96
SDCBP-206ENST00000519115 CCDC129Q6ZRS4 1044 aa9.05□□□□□ -0.96
SDCBP-206ENST00000519115 TTC6Q86TZ1 520 aa9.05□□□□□ -0.96
SDCBP-206ENST00000519115 IFNL1Q8IU54 200 aa9.05□□□□□ -0.96
SDCBP-206ENST00000519115 SLC44A5Q8NCS7 719 aa9.05□□□□□ -0.96
SDCBP-206ENST00000519115 RILPL2Q969X0 211 aa9.05□□□□□ -0.96
SDCBP-206ENST00000519115 STRBPQ96SI9 672 aaKnown RBP9.05□□□□□ -0.96
SDCBP-206ENST00000519115 PTPN18Q99952 460 aa9.05□□□□□ -0.96
SDCBP-206ENST00000519115 ESYT1Q9BSJ8 1104 aa9.05□□□□□ -0.96
SDCBP-206ENST00000519115 C22orf23Q9BZE7 217 aa9.05□□□□□ -0.96
SDCBP-206ENST00000519115 HELLSQ9NRZ9 838 aa9.05□□□□□ -0.96
SDCBP-206ENST00000519115 ATP8A2Q9NTI2 1148 aa9.05□□□□□ -0.96
SDCBP-206ENST00000519115 SERPINB13Q9UIV8 391 aa9.05□□□□□ -0.96
SDCBP-206ENST00000519115 ZHX2Q9Y6X8 837 aa9.05□□□□□ -0.96
SDCBP-206ENST00000519115 ZSWIM8A7E2V4 1837 aa9.05□□□□□ -0.96
SDCBP-206ENST00000519115 A0A0D9SFI3 127 aa9.04□□□□□ -0.96
SDCBP-206ENST00000519115 TRIM75PA6NK02 468 aa9.04□□□□□ -0.96
SDCBP-206ENST00000519115 GSG1L2A8MUP6 293 aa9.04□□□□□ -0.96
SDCBP-206ENST00000519115 USP17L12C9JPN9 530 aa9.04□□□□□ -0.96
SDCBP-206ENST00000519115 USP17L21D6R901 530 aa9.04□□□□□ -0.96
SDCBP-206ENST00000519115 TBC1D8O95759 1140 aa9.04□□□□□ -0.96
SDCBP-206ENST00000519115 CETPP11597 493 aa9.04□□□□□ -0.96
SDCBP-206ENST00000519115 SNAPC2Q13487 334 aa9.04□□□□□ -0.96
SDCBP-206ENST00000519115 COL13A1Q5TAT6 717 aaPredicted RBP9.04□□□□□ -0.96
SDCBP-206ENST00000519115 METTL16Q86W50 562 aaKnown RBP9.04□□□□□ -0.96
SDCBP-206ENST00000519115 FOXP4Q8IVH2 680 aaPredicted RBP9.04□□□□□ -0.96
SDCBP-206ENST00000519115 DYNLL2Q96FJ2 89 aa9.04□□□□□ -0.96
SDCBP-206ENST00000519115 FAM227BQ96M60 508 aa9.04□□□□□ -0.96
SDCBP-206ENST00000519115 EHD4Q9H223 541 aa9.04□□□□□ -0.96
SDCBP-206ENST00000519115 R3HDMLQ9H3Y0 253 aa9.04□□□□□ -0.96
SDCBP-206ENST00000519115 EPB41L4AQ9HCS5 686 aaPredicted RBP9.04□□□□□ -0.96
SDCBP-206ENST00000519115 DIAPH3Q9NSV4 1193 aa9.04□□□□□ -0.96
SDCBP-206ENST00000519115 SAGE1Q9NXZ1 904 aa9.04□□□□□ -0.96
SDCBP-206ENST00000519115 MYH4Q9Y623 1939 aa9.03□□□□□ -0.96
SDCBP-206ENST00000519115 LAMA4Q16363 1823 aa9.03□□□□□ -0.96
SDCBP-206ENST00000519115 BTBD19C9JJ37 291 aa9.03□□□□□ -0.96
SDCBP-206ENST00000519115 HAX1O00165 279 aa9.03□□□□□ -0.96
SDCBP-206ENST00000519115 GH2P01242 217 aa9.03□□□□□ -0.96
SDCBP-206ENST00000519115 APPP05067 770 aa9.03□□□□□ -0.96
SDCBP-206ENST00000519115 MCCP23508 829 aa9.03□□□□□ -0.96
SDCBP-206ENST00000519115 SHMT1P34896 483 aa9.03□□□□□ -0.96
SDCBP-206ENST00000519115 FXR2P51116 673 aaKnown RBP eCLIP9.03□□□□□ -0.96
SDCBP-206ENST00000519115 INHBEP58166 350 aa9.03□□□□□ -0.96
SDCBP-206ENST00000519115 GABPAQ06546 454 aa9.03□□□□□ -0.96
SDCBP-206ENST00000519115 NMIQ13287 307 aaPredicted RBP9.03□□□□□ -0.96
SDCBP-206ENST00000519115 CTR9Q6PD62 1173 aa9.03□□□□□ -0.96
SDCBP-206ENST00000519115 KIAA1211Q6ZU35 1233 aa9.03□□□□□ -0.96
SDCBP-206ENST00000519115 AMOTL1Q8IY63 956 aa9.03□□□□□ -0.96
SDCBP-206ENST00000519115 STK11IPQ8N1F8 1099 aa9.03□□□□□ -0.96
SDCBP-206ENST00000519115 FAM43AQ8N2R8 423 aa9.03□□□□□ -0.96
SDCBP-206ENST00000519115 ZBTB21Q9ULJ3 1066 aa9.03□□□□□ -0.96
SDCBP-206ENST00000519115 KCNH4Q9UQ05 1017 aa9.03□□□□□ -0.96
SDCBP-206ENST00000519115 AFG3L2Q9Y4W6 797 aa9.03□□□□□ -0.96
SDCBP-206ENST00000519115 GREB1LQ9C091 1923 aaPredicted RBP9.03□□□□□ -0.96
SDCBP-206ENST00000519115 TESPA1A2RU30 521 aaPredicted RBP9.02□□□□□ -0.97
SDCBP-206ENST00000519115 USP17L5A8MUK1 530 aa9.02□□□□□ -0.97
SDCBP-206ENST00000519115 SEC24BO95487 1268 aa9.02□□□□□ -0.97
SDCBP-206ENST00000519115 ASNSP08243 561 aa9.02□□□□□ -0.97
SDCBP-206ENST00000519115 TDO2P48775 406 aa9.02□□□□□ -0.97
SDCBP-206ENST00000519115 PLCB2Q00722 1185 aa9.02□□□□□ -0.97
SDCBP-206ENST00000519115 SPP2Q13103 211 aa9.02□□□□□ -0.97
SDCBP-206ENST00000519115 CRHR2Q13324 411 aa9.02□□□□□ -0.97
SDCBP-206ENST00000519115 DGKZQ13574 1117 aa9.02□□□□□ -0.97
SDCBP-206ENST00000519115 MOGSQ13724 837 aa9.02□□□□□ -0.97
SDCBP-206ENST00000519115 TAF1CQ15572 869 aaPredicted RBP9.02□□□□□ -0.97
SDCBP-206ENST00000519115 TSGA10IPQ3SY00 556 aa9.02□□□□□ -0.97
SDCBP-206ENST00000519115 CERKLQ49MI3 558 aaPredicted RBP9.02□□□□□ -0.97
SDCBP-206ENST00000519115 MCMDC2Q4G0Z9 681 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms