RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 REC114Q7Z4M0 266 aa6.34□□□□□ -1.39
SKP1-205ENST00000519054 MRPL41Q8IXM3 137 aaKnown RBP6.34□□□□□ -1.39
SKP1-205ENST00000519054 MFSD2AQ8NA29 543 aa6.34□□□□□ -1.39
SKP1-205ENST00000519054 RNF34Q969K3 372 aa6.34□□□□□ -1.39
SKP1-205ENST00000519054 KCNQ5Q9NR82 932 aa6.34□□□□□ -1.39
SKP1-205ENST00000519054 METTL5Q9NRN9 209 aaKnown RBP6.34□□□□□ -1.39
SKP1-205ENST00000519054 BSDC1Q9NW68 430 aaPredicted RBP6.34□□□□□ -1.39
SKP1-205ENST00000519054 KIAA1522Q9P206 1035 aaPredicted RBP6.34□□□□□ -1.39
SKP1-205ENST00000519054 ADAM30Q9UKF2 790 aa6.34□□□□□ -1.39
SKP1-205ENST00000519054 PCDHGB7Q9Y5F8 929 aa6.34□□□□□ -1.39
SKP1-205ENST00000519054 GREM1O60565 184 aa6.33□□□□□ -1.4
SKP1-205ENST00000519054 CRKP46108 304 aa6.33□□□□□ -1.4
SKP1-205ENST00000519054 OXCT1P55809 520 aa6.33□□□□□ -1.4
SKP1-205ENST00000519054 CWF19L2Q2TBE0 894 aaKnown RBP6.33□□□□□ -1.4
SKP1-205ENST00000519054 SLC6A19Q695T7 634 aa6.33□□□□□ -1.4
SKP1-205ENST00000519054 LETMD1Q6P1Q0 360 aa6.33□□□□□ -1.4
SKP1-205ENST00000519054 FAM214BQ7L5A3 538 aa6.33□□□□□ -1.4
SKP1-205ENST00000519054 USP48Q86UV5 1035 aa6.33□□□□□ -1.4
SKP1-205ENST00000519054 MCATQ8IVS2 390 aaKnown RBP6.33□□□□□ -1.4
SKP1-205ENST00000519054 RIN3Q8TB24 985 aa6.33□□□□□ -1.4
SKP1-205ENST00000519054 PRDM5Q9NQX1 630 aaPredicted RBP6.33□□□□□ -1.4
SKP1-205ENST00000519054 PODXL2Q9NZ53 605 aa6.33□□□□□ -1.4
SKP1-205ENST00000519054 UBP1Q9NZI7 540 aa6.33□□□□□ -1.4
SKP1-205ENST00000519054 CCDC39Q9UFE4 941 aa6.33□□□□□ -1.4
SKP1-205ENST00000519054 GTF2IRD1Q9UHL9 959 aa6.33□□□□□ -1.4
SKP1-205ENST00000519054 TPX2Q9ULW0 747 aaKnown RBP6.33□□□□□ -1.4
SKP1-205ENST00000519054 ANGEL1Q9UNK9 670 aaKnown RBP6.33□□□□□ -1.4
SKP1-205ENST00000519054 UPK3BL1B0FP48 263 aa6.32□□□□□ -1.4
SKP1-205ENST00000519054 UPK3BL2E5RIL1 263 aa6.32□□□□□ -1.4
SKP1-205ENST00000519054 SCAMP3O14828 347 aaKnown RBP6.32□□□□□ -1.4
SKP1-205ENST00000519054 HTR3BO95264 441 aa6.32□□□□□ -1.4
SKP1-205ENST00000519054 WNT11O96014 354 aa6.32□□□□□ -1.4
SKP1-205ENST00000519054 FAM13CQ8NE31 585 aa6.32□□□□□ -1.4
SKP1-205ENST00000519054 NETO1Q8TDF5 533 aa6.32□□□□□ -1.4
SKP1-205ENST00000519054 BRMS1Q9HCU9 246 aa6.32□□□□□ -1.4
SKP1-205ENST00000519054 REV1Q9UBZ9 1251 aa6.32□□□□□ -1.4
SKP1-205ENST00000519054 KLHL3Q9UH77 587 aa6.32□□□□□ -1.4
SKP1-205ENST00000519054 ROBO2Q9HCK4 1378 aa6.31□□□□□ -1.4
SKP1-205ENST00000519054 CNTNAP4Q9C0A0 1308 aa6.31□□□□□ -1.4
SKP1-205ENST00000519054 RBAK-RBAKDNI3L0D1 243 aa6.31□□□□□ -1.4
SKP1-205ENST00000519054 PRNPP04156 253 aa6.31□□□□□ -1.4
SKP1-205ENST00000519054 CEACAM5P06731 702 aa6.31□□□□□ -1.4
SKP1-205ENST00000519054 APOBRQ0VD83 1088 aa6.31□□□□□ -1.4
SKP1-205ENST00000519054 SEZ6Q53EL9 994 aa6.31□□□□□ -1.4
SKP1-205ENST00000519054 TMEM201Q5SNT2 666 aa6.31□□□□□ -1.4
SKP1-205ENST00000519054 CDH24Q86UP0 819 aa6.31□□□□□ -1.4
SKP1-205ENST00000519054 VSIG10LQ86VR7 867 aa6.31□□□□□ -1.4
SKP1-205ENST00000519054 KIAA0825Q8IV33 1275 aa6.31□□□□□ -1.4
SKP1-205ENST00000519054 ZNF428Q96B54 188 aa6.31□□□□□ -1.4
SKP1-205ENST00000519054 SPON2Q9BUD6 331 aa6.31□□□□□ -1.4
SKP1-205ENST00000519054 LRRC3Q9BY71 257 aa6.31□□□□□ -1.4
SKP1-205ENST00000519054 MKNK2Q9HBH9 465 aa6.31□□□□□ -1.4
SKP1-205ENST00000519054 PLAGL2Q9UPG8 496 aa6.31□□□□□ -1.4
SKP1-205ENST00000519054 PCDHB14Q9Y5E9 798 aa6.31□□□□□ -1.4
SKP1-205ENST00000519054 PRR36Q9H6K5 1346 aa6.3□□□□□ -1.4
SKP1-205ENST00000519054 GNAT3A8MTJ3 354 aa6.3□□□□□ -1.4
SKP1-205ENST00000519054 IGF2BP3O00425 579 aaKnown RBP eCLIP6.3□□□□□ -1.4
SKP1-205ENST00000519054 GP2P55259 537 aaKnown RBP6.3□□□□□ -1.4
SKP1-205ENST00000519054 IFI16Q16666 785 aaKnown RBP6.3□□□□□ -1.4
SKP1-205ENST00000519054 C9orf131Q5VYM1 1079 aa6.3□□□□□ -1.4
SKP1-205ENST00000519054 FLCNQ8NFG4 579 aa6.3□□□□□ -1.4
SKP1-205ENST00000519054 EAF1Q96JC9 268 aaPredicted RBP6.3□□□□□ -1.4
SKP1-205ENST00000519054 MAPK8IP1Q9UQF2 711 aa6.3□□□□□ -1.4
SKP1-205ENST00000519054 PRR33A8MZF0 331 aa6.29□□□□□ -1.4
SKP1-205ENST00000519054 CHURC1-FNTBB4DL54 471 aa6.29□□□□□ -1.4
SKP1-205ENST00000519054 DNAJA2O60884 412 aa6.29□□□□□ -1.4
SKP1-205ENST00000519054 MCM4P33991 863 aa6.29□□□□□ -1.4
SKP1-205ENST00000519054 YARSP54577 528 aaKnown RBP6.29□□□□□ -1.4
SKP1-205ENST00000519054 RACK1P63244 317 aaKnown RBP6.29□□□□□ -1.4
SKP1-205ENST00000519054 HDLBPQ00341 1268 aaKnown RBP6.29□□□□□ -1.4
SKP1-205ENST00000519054 BNIP3Q12983 259 aa6.29□□□□□ -1.4
SKP1-205ENST00000519054 SFRP5Q5T4F7 317 aa6.29□□□□□ -1.4
SKP1-205ENST00000519054 ZNF574Q6ZN55 896 aaPredicted RBP6.29□□□□□ -1.4
SKP1-205ENST00000519054 NFXL1Q6ZNB6 911 aa6.29□□□□□ -1.4
SKP1-205ENST00000519054 METTL16Q86W50 562 aaKnown RBP6.29□□□□□ -1.4
SKP1-205ENST00000519054 BCL7CQ8WUZ0 217 aaPredicted RBP6.29□□□□□ -1.4
SKP1-205ENST00000519054 NKD1Q969G9 470 aa6.29□□□□□ -1.4
SKP1-205ENST00000519054 NT5C1AQ9BXI3 368 aa6.29□□□□□ -1.4
SKP1-205ENST00000519054 DDX41Q9UJV9 622 aaKnown RBP6.29□□□□□ -1.4
SKP1-205ENST00000519054 OAS3Q9Y6K5 1087 aaKnown RBP6.29□□□□□ -1.4
SKP1-205ENST00000519054 TMEM265A0A087WTH1 108 aa6.28□□□□□ -1.4
SKP1-205ENST00000519054 CBX7O95931 251 aa6.28□□□□□ -1.4
SKP1-205ENST00000519054 CD96P40200 585 aa6.28□□□□□ -1.4
SKP1-205ENST00000519054 AOC3Q16853 763 aa6.28□□□□□ -1.4
SKP1-205ENST00000519054 ZNF746Q6NUN9 644 aaPredicted RBP6.28□□□□□ -1.4
SKP1-205ENST00000519054 GK5Q6ZS86 529 aa6.28□□□□□ -1.4
SKP1-205ENST00000519054 SPACA3Q8IXA5 215 aa6.28□□□□□ -1.4
SKP1-205ENST00000519054 TP53INP2Q8IXH6 220 aa6.28□□□□□ -1.4
SKP1-205ENST00000519054 CYB5D2Q8WUJ1 264 aa6.28□□□□□ -1.4
SKP1-205ENST00000519054 HRASLS5Q96KN8 279 aa6.28□□□□□ -1.4
SKP1-205ENST00000519054 SLC5A6Q9Y289 635 aa6.28□□□□□ -1.4
SKP1-205ENST00000519054 FAM155AB1AL88 458 aaPredicted RBP6.27□□□□□ -1.41
SKP1-205ENST00000519054 CLCQ05315 142 aa6.27□□□□□ -1.41
SKP1-205ENST00000519054 MLECQ14165 292 aa6.27□□□□□ -1.41
SKP1-205ENST00000519054 NKPD1Q17RQ9 610 aa6.27□□□□□ -1.41
SKP1-205ENST00000519054 SPRED2Q7Z698 418 aa6.27□□□□□ -1.41
SKP1-205ENST00000519054 NT5DC4Q86YG4 428 aa6.27□□□□□ -1.41
SKP1-205ENST00000519054 SLFN12Q8IYM2 578 aa6.27□□□□□ -1.41
SKP1-205ENST00000519054 PHACTR4Q8IZ21 702 aa6.27□□□□□ -1.41
SKP1-205ENST00000519054 STK11IPQ8N1F8 1099 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms