RNA–Protein interactions for RNA: ENST00000518251.1

BRD9-216, Transcript of bromodomain containing 9, humanhuman

TSL 4

Gene BRD9, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-216ENST00000518251 SH3RF3Q8TEJ3 882 aaPredicted RBP12.43□□□□□ -0.42
BRD9-216ENST00000518251 TEKT1Q969V4 418 aa12.43□□□□□ -0.42
BRD9-216ENST00000518251 NBPF3Q9H094 633 aa12.43□□□□□ -0.42
BRD9-216ENST00000518251 DEFB129Q9H1M3 183 aa12.43□□□□□ -0.42
BRD9-216ENST00000518251 ARPP21Q9UBL0 812 aaPredicted RBP12.43□□□□□ -0.42
BRD9-216ENST00000518251 PPP2R3BQ9Y5P8 575 aa12.43□□□□□ -0.42
BRD9-216ENST00000518251 HDLBPQ00341 1268 aaKnown RBP12.42□□□□□ -0.42
BRD9-216ENST00000518251 PPARAQ07869 468 aa12.42□□□□□ -0.42
BRD9-216ENST00000518251 TRDNQ13061 729 aa12.42□□□□□ -0.42
BRD9-216ENST00000518251 ANKRD1Q15327 319 aa12.42□□□□□ -0.42
BRD9-216ENST00000518251 HHIPL2Q6UWX4 724 aa12.42□□□□□ -0.42
BRD9-216ENST00000518251 NOL8Q76FK4 1167 aaKnown RBP12.42□□□□□ -0.42
BRD9-216ENST00000518251 DHX32Q7L7V1 743 aaKnown RBP12.42□□□□□ -0.42
BRD9-216ENST00000518251 TEX11Q8IYF3 940 aa12.42□□□□□ -0.42
BRD9-216ENST00000518251 MTMR14Q8NCE2 650 aa12.42□□□□□ -0.42
BRD9-216ENST00000518251 ALDH8A1Q9H2A2 487 aaPredicted RBP12.42□□□□□ -0.42
BRD9-216ENST00000518251 DCP1AQ9NPI6 582 aaPredicted RBP12.42□□□□□ -0.42
BRD9-216ENST00000518251 ANAPC4Q9UJX5 808 aa12.42□□□□□ -0.42
BRD9-216ENST00000518251 SPDYE2BA6NHP3 402 aa12.41□□□□□ -0.42
BRD9-216ENST00000518251 HSP90AA1P07900 732 aaKnown RBP12.41□□□□□ -0.42
BRD9-216ENST00000518251 SPDYE6P0CI01 402 aa12.41□□□□□ -0.42
BRD9-216ENST00000518251 CRKP46108 304 aa12.41□□□□□ -0.42
BRD9-216ENST00000518251 CTDSPL2Q05D32 466 aa12.41□□□□□ -0.42
BRD9-216ENST00000518251 CRHR2Q13324 411 aa12.41□□□□□ -0.42
BRD9-216ENST00000518251 AKNAD1Q5T1N1 836 aa12.41□□□□□ -0.42
BRD9-216ENST00000518251 CTR9Q6PD62 1173 aa12.41□□□□□ -0.42
BRD9-216ENST00000518251 MB21D2Q8IYB1 491 aaPredicted RBP12.41□□□□□ -0.42
BRD9-216ENST00000518251 CD99L2Q8TCZ2 262 aa12.41□□□□□ -0.42
BRD9-216ENST00000518251 STAG1Q8WVM7 1258 aa12.41□□□□□ -0.42
BRD9-216ENST00000518251 ARMC5Q96C12 935 aa12.41□□□□□ -0.42
BRD9-216ENST00000518251 TCEANC2Q96MN5 208 aa12.41□□□□□ -0.42
BRD9-216ENST00000518251 RNF41Q9H4P4 317 aaPredicted RBP12.41□□□□□ -0.42
BRD9-216ENST00000518251 CNNM2Q9H8M5 875 aa12.41□□□□□ -0.42
BRD9-216ENST00000518251 NEDD4P46934 1319 aa12.4□□□□□ -0.42
BRD9-216ENST00000518251 WDR19Q8NEZ3 1342 aa12.4□□□□□ -0.42
BRD9-216ENST00000518251 CLRN2A0PK11 232 aa12.4□□□□□ -0.42
BRD9-216ENST00000518251 MINDY4BA8MYZ0 360 aa12.4□□□□□ -0.42
BRD9-216ENST00000518251 RHBDL3P58872 404 aa12.4□□□□□ -0.42
BRD9-216ENST00000518251 COL9A3Q14050 684 aaPredicted RBP12.4□□□□□ -0.42
BRD9-216ENST00000518251 DLGAP5Q15398 846 aa12.4□□□□□ -0.42
BRD9-216ENST00000518251 SBK1Q52WX2 424 aa12.4□□□□□ -0.42
BRD9-216ENST00000518251 AMOTL1Q8IY63 956 aa12.4□□□□□ -0.42
BRD9-216ENST00000518251 ERO1AQ96HE7 468 aa12.4□□□□□ -0.42
BRD9-216ENST00000518251 TMX3Q96JJ7 454 aa12.4□□□□□ -0.42
BRD9-216ENST00000518251 ZDHHC15Q96MV8 337 aa12.4□□□□□ -0.42
BRD9-216ENST00000518251 MRIQ9BWK5 157 aa12.4□□□□□ -0.42
BRD9-216ENST00000518251 KRT23Q9C075 422 aa12.4□□□□□ -0.42
BRD9-216ENST00000518251 SERPINA10Q9UK55 444 aa12.4□□□□□ -0.42
BRD9-216ENST00000518251 LIMCH1Q9UPQ0 1083 aa12.4□□□□□ -0.42
BRD9-216ENST00000518251 PTPN22Q9Y2R2 807 aa12.4□□□□□ -0.42
BRD9-216ENST00000518251 FLT1P17948 1338 aa12.39□□□□□ -0.43
BRD9-216ENST00000518251 UNCXA6NJT0 531 aa12.39□□□□□ -0.43
BRD9-216ENST00000518251 USP17L12C9JPN9 530 aa12.39□□□□□ -0.43
BRD9-216ENST00000518251 USP17L21D6R901 530 aa12.39□□□□□ -0.43
BRD9-216ENST00000518251 PCP11498 1178 aaKnown RBP12.39□□□□□ -0.43
BRD9-216ENST00000518251 MCM5P33992 734 aa12.39□□□□□ -0.43
BRD9-216ENST00000518251 INHBEP58166 350 aa12.39□□□□□ -0.43
BRD9-216ENST00000518251 FGD1P98174 961 aa12.39□□□□□ -0.43
BRD9-216ENST00000518251 EXOSC10Q01780 885 aaKnown RBP12.39□□□□□ -0.43
BRD9-216ENST00000518251 TOB2Q14106 344 aaPredicted RBP12.39□□□□□ -0.43
BRD9-216ENST00000518251 CFAP100Q494V2 611 aa12.39□□□□□ -0.43
BRD9-216ENST00000518251 MFSD6Q6ZSS7 791 aa12.39□□□□□ -0.43
BRD9-216ENST00000518251 Q6ZUG5 572 aa12.39□□□□□ -0.43
BRD9-216ENST00000518251 MAPKAPK5Q8IW41 473 aa12.39□□□□□ -0.43
BRD9-216ENST00000518251 SPRYD3Q8NCJ5 442 aa12.39□□□□□ -0.43
BRD9-216ENST00000518251 TGFBRAP1Q8WUH2 860 aa12.39□□□□□ -0.43
BRD9-216ENST00000518251 ZSCAN31Q96LW9 406 aaPredicted RBP12.39□□□□□ -0.43
BRD9-216ENST00000518251 PTPN18Q99952 460 aa12.39□□□□□ -0.43
BRD9-216ENST00000518251 SH2B1Q9NRF2 756 aaPredicted RBP12.39□□□□□ -0.43
BRD9-216ENST00000518251 MCM9Q9NXL9 1143 aa12.39□□□□□ -0.43
BRD9-216ENST00000518251 ROBO3Q96MS0 1386 aa12.39□□□□□ -0.43
BRD9-216ENST00000518251 MYH1P12882 1939 aa12.39□□□□□ -0.43
BRD9-216ENST00000518251 CYP2D7A0A087X1C5 515 aa12.38□□□□□ -0.43
BRD9-216ENST00000518251 TESPA1A2RU30 521 aaPredicted RBP12.38□□□□□ -0.43
BRD9-216ENST00000518251 B4E1Z4 1266 aa12.38□□□□□ -0.43
BRD9-216ENST00000518251 PRC1O43663 620 aa12.38□□□□□ -0.43
BRD9-216ENST00000518251 SLC3A2P08195 630 aaKnown RBP12.38□□□□□ -0.43
BRD9-216ENST00000518251 FXR1P51114 621 aaKnown RBP eCLIP12.38□□□□□ -0.43
BRD9-216ENST00000518251 RBM5P52756 815 aaKnown RBP eCLIP12.38□□□□□ -0.43
BRD9-216ENST00000518251 CUL4AQ13619 759 aa12.38□□□□□ -0.43
BRD9-216ENST00000518251 NBPF12Q5TAG4 269 aaPredicted RBP12.38□□□□□ -0.43
BRD9-216ENST00000518251 APOBEC3HQ6NTF7 200 aaKnown RBP12.38□□□□□ -0.43
BRD9-216ENST00000518251 CDC42EP5Q6NZY7 148 aa12.38□□□□□ -0.43
BRD9-216ENST00000518251 SLC10A4Q96EP9 437 aa12.38□□□□□ -0.43
BRD9-216ENST00000518251 LRRC2Q9BYS8 371 aa12.38□□□□□ -0.43
BRD9-216ENST00000518251 SLKQ9H2G2 1235 aaPredicted RBP12.38□□□□□ -0.43
BRD9-216ENST00000518251 TOMM22Q9NS69 142 aa12.38□□□□□ -0.43
BRD9-216ENST00000518251 USP40Q9NVE5 1235 aa12.38□□□□□ -0.43
BRD9-216ENST00000518251 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.38□□□□□ -0.43
BRD9-216ENST00000518251 PPP1R12BO60237 982 aaPredicted RBP12.37□□□□□ -0.43
BRD9-216ENST00000518251 LARGE1O95461 756 aa12.37□□□□□ -0.43
BRD9-216ENST00000518251 POLR3DP05423 398 aaPredicted RBP12.37□□□□□ -0.43
BRD9-216ENST00000518251 CYP2D6P10635 497 aa12.37□□□□□ -0.43
BRD9-216ENST00000518251 EN2P19622 333 aaPredicted RBP12.37□□□□□ -0.43
BRD9-216ENST00000518251 ANTXR2P58335 489 aa12.37□□□□□ -0.43
BRD9-216ENST00000518251 C12orf60Q5U649 245 aa12.37□□□□□ -0.43
BRD9-216ENST00000518251 CHST3Q7LGC8 479 aa12.37□□□□□ -0.43
BRD9-216ENST00000518251 CDAN1Q8IWY9 1227 aa12.37□□□□□ -0.43
BRD9-216ENST00000518251 BRF1Q92994 677 aa12.37□□□□□ -0.43
BRD9-216ENST00000518251 ZNF333Q96JL9 665 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms