RNA–Protein interactions for RNA: ENST00000517790.1

PVT1-205, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 599 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-205ENST00000517790 PTPN12Q05209 780 aaKnown RBP6.5□□□□□ -1.37
PVT1-205ENST00000517790 EHHADHQ08426 723 aa6.5□□□□□ -1.37
PVT1-205ENST00000517790 KCNH2Q12809 1159 aa6.5□□□□□ -1.37
PVT1-205ENST00000517790 CBLBQ13191 982 aa6.5□□□□□ -1.37
PVT1-205ENST00000517790 SCARF1Q14162 830 aa6.5□□□□□ -1.37
PVT1-205ENST00000517790 ENOX2Q16206 610 aaKnown RBP6.5□□□□□ -1.37
PVT1-205ENST00000517790 PHTF2Q8N3S3 785 aa6.5□□□□□ -1.37
PVT1-205ENST00000517790 PLPP7Q8NBV4 271 aa6.5□□□□□ -1.37
PVT1-205ENST00000517790 PHACTR3Q96KR7 559 aa6.5□□□□□ -1.37
PVT1-205ENST00000517790 CEP89Q96ST8 783 aa6.5□□□□□ -1.37
PVT1-205ENST00000517790 TMX4Q9H1E5 349 aaPredicted RBP6.5□□□□□ -1.37
PVT1-205ENST00000517790 C12orf49Q9H741 205 aa6.5□□□□□ -1.37
PVT1-205ENST00000517790 SIRPGQ9P1W8 387 aa6.5□□□□□ -1.37
PVT1-205ENST00000517790 SFMBT1Q9UHJ3 866 aa6.5□□□□□ -1.37
PVT1-205ENST00000517790 MAP3K15Q6ZN16 1313 aa6.5□□□□□ -1.37
PVT1-205ENST00000517790 IBTKQ9P2D0 1353 aaPredicted RBP6.49□□□□□ -1.37
PVT1-205ENST00000517790 IFRD1O00458 451 aaPredicted RBP6.49□□□□□ -1.37
PVT1-205ENST00000517790 SOX1O00570 391 aaPredicted RBP6.49□□□□□ -1.37
PVT1-205ENST00000517790 ZBTB7BO15156 539 aaPredicted RBP6.49□□□□□ -1.37
PVT1-205ENST00000517790 NDUFB5O43674 189 aa6.49□□□□□ -1.37
PVT1-205ENST00000517790 ECE2O60344 883 aa6.49□□□□□ -1.37
PVT1-205ENST00000517790 DIAPH1O60610 1272 aaKnown RBP6.49□□□□□ -1.37
PVT1-205ENST00000517790 BBOX1O75936 387 aa6.49□□□□□ -1.37
PVT1-205ENST00000517790 LDHAP00338 332 aaKnown RBP6.49□□□□□ -1.37
PVT1-205ENST00000517790 FGAP02671 866 aa6.49□□□□□ -1.37
PVT1-205ENST00000517790 HSP90AA1P07900 732 aaKnown RBP6.49□□□□□ -1.37
PVT1-205ENST00000517790 HCLS1P14317 486 aaPredicted RBP6.49□□□□□ -1.37
PVT1-205ENST00000517790 SEC13P55735 322 aa6.49□□□□□ -1.37
PVT1-205ENST00000517790 DCTN1Q14203 1278 aa6.49□□□□□ -1.37
PVT1-205ENST00000517790 EML3Q32P44 896 aa6.49□□□□□ -1.37
PVT1-205ENST00000517790 MCM10Q7L590 875 aa6.49□□□□□ -1.37
PVT1-205ENST00000517790 ZNF34Q8IZ26 560 aa6.49□□□□□ -1.37
PVT1-205ENST00000517790 CD99L2Q8TCZ2 262 aa6.49□□□□□ -1.37
PVT1-205ENST00000517790 ZNF512BQ96KM6 892 aaPredicted RBP6.49□□□□□ -1.37
PVT1-205ENST00000517790 DMRTB1Q96MA1 342 aa6.49□□□□□ -1.37
PVT1-205ENST00000517790 NLRP3Q96P20 1036 aa6.49□□□□□ -1.37
PVT1-205ENST00000517790 NAP1L4Q99733 375 aaKnown RBP6.49□□□□□ -1.37
PVT1-205ENST00000517790 MIS18AQ9NYP9 233 aa6.49□□□□□ -1.37
PVT1-205ENST00000517790 CEP126Q9P2H0 1117 aa6.49□□□□□ -1.37
PVT1-205ENST00000517790 PTPN22Q9Y2R2 807 aa6.49□□□□□ -1.37
PVT1-205ENST00000517790 RRP7AQ9Y3A4 280 aaKnown RBP6.49□□□□□ -1.37
PVT1-205ENST00000517790 PCDHGB7Q9Y5F8 929 aa6.49□□□□□ -1.37
PVT1-205ENST00000517790 LAMB4A4D0S4 1761 aa6.49□□□□□ -1.37
PVT1-205ENST00000517790 ANKRD36CQ5JPF3 1778 aa6.49□□□□□ -1.37
PVT1-205ENST00000517790 LRRC37AA6NMS7 1700 aa6.48□□□□□ -1.37
PVT1-205ENST00000517790 CFAP69A5D8W1 941 aa6.48□□□□□ -1.37
PVT1-205ENST00000517790 WTIPA6NIX2 430 aaPredicted RBP6.48□□□□□ -1.37
PVT1-205ENST00000517790 ERVV-1B6SEH8 477 aa6.48□□□□□ -1.37
PVT1-205ENST00000517790 PLIN1O60240 522 aa6.48□□□□□ -1.37
PVT1-205ENST00000517790 CAND2O75155 1236 aa6.48□□□□□ -1.37
PVT1-205ENST00000517790 CDC45O75419 566 aa6.48□□□□□ -1.37
PVT1-205ENST00000517790 MYL6BP14649 208 aa6.48□□□□□ -1.37
PVT1-205ENST00000517790 RPS12P25398 132 aaKnown RBP6.48□□□□□ -1.37
PVT1-205ENST00000517790 NOS2P35228 1153 aa6.48□□□□□ -1.37
PVT1-205ENST00000517790 ATP2B2Q01814 1243 aa6.48□□□□□ -1.37
PVT1-205ENST00000517790 POU5F1BQ06416 359 aa6.48□□□□□ -1.37
PVT1-205ENST00000517790 HDAC1Q13547 482 aaPredicted RBP6.48□□□□□ -1.37
PVT1-205ENST00000517790 PRKG1Q13976 671 aa6.48□□□□□ -1.37
PVT1-205ENST00000517790 MAP7D1Q3KQU3 841 aa6.48□□□□□ -1.37
PVT1-205ENST00000517790 C6orf132Q5T0Z8 1188 aa6.48□□□□□ -1.37
PVT1-205ENST00000517790 AXDND1Q5T1B0 1012 aaPredicted RBP6.48□□□□□ -1.37
PVT1-205ENST00000517790 KIAA0907Q7Z7F0 614 aaPredicted RBP6.48□□□□□ -1.37
PVT1-205ENST00000517790 SAMD3Q8N6K7 520 aa6.48□□□□□ -1.37
PVT1-205ENST00000517790 GAS2L2Q8NHY3 880 aa6.48□□□□□ -1.37
PVT1-205ENST00000517790 HELQQ8TDG4 1101 aa6.48□□□□□ -1.37
PVT1-205ENST00000517790 LRCH3Q96II8 777 aa6.48□□□□□ -1.37
PVT1-205ENST00000517790 SRPK1Q96SB4 655 aaKnown RBP6.48□□□□□ -1.37
PVT1-205ENST00000517790 CFHR5Q9BXR6 569 aa6.48□□□□□ -1.37
PVT1-205ENST00000517790 AVENQ9NQS1 362 aaPredicted RBP6.48□□□□□ -1.37
PVT1-205ENST00000517790 HOMER2Q9NSB8 354 aa6.48□□□□□ -1.37
PVT1-205ENST00000517790 POLLQ9UGP5 575 aa6.48□□□□□ -1.37
PVT1-205ENST00000517790 FZD1Q9UP38 647 aa6.48□□□□□ -1.37
PVT1-205ENST00000517790 NOD1Q9Y239 953 aa6.48□□□□□ -1.37
PVT1-205ENST00000517790 C6orf229H3BNL8 230 aa6.47□□□□□ -1.37
PVT1-205ENST00000517790 IGF2BP3O00425 579 aaKnown RBP eCLIP6.47□□□□□ -1.37
PVT1-205ENST00000517790 ZNF500O60304 480 aaPredicted RBP6.47□□□□□ -1.37
PVT1-205ENST00000517790 NR1I2O75469 434 aa6.47□□□□□ -1.37
PVT1-205ENST00000517790 IGHA2P01877 340 aa6.47□□□□□ -1.37
PVT1-205ENST00000517790 CD53P19397 219 aa6.47□□□□□ -1.37
PVT1-205ENST00000517790 FKBP1BP68106 108 aa6.47□□□□□ -1.37
PVT1-205ENST00000517790 GPSM2P81274 684 aa6.47□□□□□ -1.37
PVT1-205ENST00000517790 GUCA2AQ02747 115 aa6.47□□□□□ -1.37
PVT1-205ENST00000517790 ZRSR2Q15696 482 aaKnown RBP6.47□□□□□ -1.37
PVT1-205ENST00000517790 SLC10A5Q5PT55 438 aa6.47□□□□□ -1.37
PVT1-205ENST00000517790 ZNF280DQ6N043 979 aa6.47□□□□□ -1.37
PVT1-205ENST00000517790 KIF6Q6ZMV9 814 aa6.47□□□□□ -1.37
PVT1-205ENST00000517790 LRP10Q7Z4F1 713 aa6.47□□□□□ -1.37
PVT1-205ENST00000517790 CRELD1Q96HD1 420 aa6.47□□□□□ -1.37
PVT1-205ENST00000517790 COL25A1Q9BXS0 654 aaPredicted RBP6.47□□□□□ -1.37
PVT1-205ENST00000517790 FANCLQ9NW38 375 aa6.47□□□□□ -1.37
PVT1-205ENST00000517790 MAP3K20Q9NYL2 800 aaKnown RBP6.47□□□□□ -1.37
PVT1-205ENST00000517790 NRBP1Q9UHY1 535 aa6.47□□□□□ -1.37
PVT1-205ENST00000517790 NSFL1CQ9UNZ2 370 aaKnown RBP6.47□□□□□ -1.37
PVT1-205ENST00000517790 ZNF609O15014 1411 aa6.47□□□□□ -1.37
PVT1-205ENST00000517790 COL3A1P02461 1466 aaPredicted RBP6.47□□□□□ -1.37
PVT1-205ENST00000517790 ZSWIM8A7E2V4 1837 aa6.46□□□□□ -1.37
PVT1-205ENST00000517790 LAMA3Q16787 3333 aa6.46□□□□□ -1.38
PVT1-205ENST00000517790 PER1O15534 1290 aaPredicted RBP6.46□□□□□ -1.38
PVT1-205ENST00000517790 MAN1A1P33908 653 aa6.46□□□□□ -1.38
PVT1-205ENST00000517790 GCGRP47871 477 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms