RNA–Protein interactions for RNA: ENST00000517656.5

CTNNA1-204, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-204ENST00000517656 CRACR2BQ8N4Y2 399 aaPredicted RBP10.29□□□□□ -0.76
CTNNA1-204ENST00000517656 U2AF1L4Q8WU68 220 aaKnown RBP10.29□□□□□ -0.76
CTNNA1-204ENST00000517656 TRIM34Q9BYJ4 488 aa10.29□□□□□ -0.76
CTNNA1-204ENST00000517656 UNC93B1Q9H1C4 597 aa10.29□□□□□ -0.76
CTNNA1-204ENST00000517656 ASCC2Q9H1I8 757 aaPredicted RBP10.29□□□□□ -0.76
CTNNA1-204ENST00000517656 PALD1Q9ULE6 856 aa10.29□□□□□ -0.76
CTNNA1-204ENST00000517656 SIPA1L1O43166 1804 aa10.28□□□□□ -0.76
CTNNA1-204ENST00000517656 C19orf81C9J6K1 198 aa10.28□□□□□ -0.76
CTNNA1-204ENST00000517656 H0YGN5 161 aa10.28□□□□□ -0.76
CTNNA1-204ENST00000517656 IDH1O75874 414 aaKnown RBP10.28□□□□□ -0.76
CTNNA1-204ENST00000517656 SGPL1O95470 568 aa10.28□□□□□ -0.76
CTNNA1-204ENST00000517656 HOXA7P31268 230 aaPredicted RBP10.28□□□□□ -0.76
CTNNA1-204ENST00000517656 PANK1Q8TE04 598 aa10.28□□□□□ -0.76
CTNNA1-204ENST00000517656 TMOD4Q9NZQ9 345 aa10.28□□□□□ -0.76
CTNNA1-204ENST00000517656 MORF4L1Q9UBU8 362 aa10.28□□□□□ -0.76
CTNNA1-204ENST00000517656 SAP30BPQ9UHR5 308 aaKnown RBP10.28□□□□□ -0.76
CTNNA1-204ENST00000517656 ZBTB21Q9ULJ3 1066 aa10.28□□□□□ -0.76
CTNNA1-204ENST00000517656 COLQQ9Y215 455 aaPredicted RBP10.28□□□□□ -0.76
CTNNA1-204ENST00000517656 EXOC6BQ9Y2D4 811 aa10.28□□□□□ -0.76
CTNNA1-204ENST00000517656 MGAMO43451 1857 aa10.27□□□□□ -0.76
CTNNA1-204ENST00000517656 USP17L10C9JJH3 530 aa10.27□□□□□ -0.77
CTNNA1-204ENST00000517656 FARP2O94887 1054 aaPredicted RBP10.27□□□□□ -0.77
CTNNA1-204ENST00000517656 GDF11O95390 407 aa10.27□□□□□ -0.77
CTNNA1-204ENST00000517656 MS4A1P11836 297 aa10.27□□□□□ -0.77
CTNNA1-204ENST00000517656 IRX3P78415 501 aaPredicted RBP10.27□□□□□ -0.77
CTNNA1-204ENST00000517656 MAP3K12Q12852 859 aa10.27□□□□□ -0.77
CTNNA1-204ENST00000517656 SHROOM1Q2M3G4 852 aaPredicted RBP10.27□□□□□ -0.77
CTNNA1-204ENST00000517656 HSP90AB4PQ58FF6 505 aa10.27□□□□□ -0.77
CTNNA1-204ENST00000517656 AACSQ86V21 672 aa10.27□□□□□ -0.77
CTNNA1-204ENST00000517656 MAGEB6Q8N7X4 407 aa10.27□□□□□ -0.77
CTNNA1-204ENST00000517656 MIGA1Q8NAN2 632 aa10.27□□□□□ -0.77
CTNNA1-204ENST00000517656 DPF3Q92784 378 aa10.27□□□□□ -0.77
CTNNA1-204ENST00000517656 HTATIP2Q9BUP3 242 aa10.27□□□□□ -0.77
CTNNA1-204ENST00000517656 EHD4Q9H223 541 aa10.27□□□□□ -0.77
CTNNA1-204ENST00000517656 ANTXR1Q9H6X2 564 aa10.27□□□□□ -0.77
CTNNA1-204ENST00000517656 PAK6Q9NQU5 681 aaPredicted RBP10.27□□□□□ -0.77
CTNNA1-204ENST00000517656 GJD2Q9UKL4 321 aa10.27□□□□□ -0.77
CTNNA1-204ENST00000517656 TAOK2Q9UL54 1235 aa10.27□□□□□ -0.77
CTNNA1-204ENST00000517656 NDUFB9Q9Y6M9 179 aa10.27□□□□□ -0.77
CTNNA1-204ENST00000517656 ATAD5Q96QE3 1844 aa10.27□□□□□ -0.77
CTNNA1-204ENST00000517656 SZT2Q5T011 3432 aa10.27□□□□□ -0.77
CTNNA1-204ENST00000517656 USP5P45974 858 aa10.26□□□□□ -0.77
CTNNA1-204ENST00000517656 FXR1P51114 621 aaKnown RBP eCLIP10.26□□□□□ -0.77
CTNNA1-204ENST00000517656 HERVK_113P62684 666 aa10.26□□□□□ -0.77
CTNNA1-204ENST00000517656 TATDN1Q6P1N9 297 aa10.26□□□□□ -0.77
CTNNA1-204ENST00000517656 RHPN1Q8TCX5 695 aa10.26□□□□□ -0.77
CTNNA1-204ENST00000517656 DEFB118Q96PH6 123 aa10.26□□□□□ -0.77
CTNNA1-204ENST00000517656 P2RX7Q99572 595 aaKnown RBP10.26□□□□□ -0.77
CTNNA1-204ENST00000517656 CRISPLD2Q9H0B8 497 aa10.26□□□□□ -0.77
CTNNA1-204ENST00000517656 SERPINB13Q9UIV8 391 aa10.26□□□□□ -0.77
CTNNA1-204ENST00000517656 FOCADQ5VW36 1801 aa10.26□□□□□ -0.77
CTNNA1-204ENST00000517656 GH2P01242 217 aa10.25□□□□□ -0.77
CTNNA1-204ENST00000517656 TFRCP02786 760 aaKnown RBP10.25□□□□□ -0.77
CTNNA1-204ENST00000517656 HMGCRP04035 888 aa10.25□□□□□ -0.77
CTNNA1-204ENST00000517656 TTF1Q15361 905 aaPredicted RBP10.25□□□□□ -0.77
CTNNA1-204ENST00000517656 USP17L2Q6R6M4 530 aa10.25□□□□□ -0.77
CTNNA1-204ENST00000517656 TTC6Q86TZ1 520 aa10.25□□□□□ -0.77
CTNNA1-204ENST00000517656 RPAP2Q8IXW5 612 aaPredicted RBP10.25□□□□□ -0.77
CTNNA1-204ENST00000517656 GPRC5AQ8NFJ5 357 aa10.25□□□□□ -0.77
CTNNA1-204ENST00000517656 GTF3C2Q8WUA4 911 aaPredicted RBP10.25□□□□□ -0.77
CTNNA1-204ENST00000517656 RIOK1Q9BRS2 568 aaKnown RBP10.25□□□□□ -0.77
CTNNA1-204ENST00000517656 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.25□□□□□ -0.77
CTNNA1-204ENST00000517656 TXNRD2Q9NNW7 524 aa10.25□□□□□ -0.77
CTNNA1-204ENST00000517656 IL1RAPL2Q9NP60 686 aa10.25□□□□□ -0.77
CTNNA1-204ENST00000517656 EMILIN3Q9NT22 766 aa10.25□□□□□ -0.77
CTNNA1-204ENST00000517656 CDK5RAP2Q96SN8 1893 aa10.25□□□□□ -0.77
CTNNA1-204ENST00000517656 HMMRO75330 724 aa10.24□□□□□ -0.77
CTNNA1-204ENST00000517656 CHRDL2Q6WN34 429 aa10.24□□□□□ -0.77
CTNNA1-204ENST00000517656 CLASRPQ8N2M8 674 aaKnown RBP10.24□□□□□ -0.77
CTNNA1-204ENST00000517656 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.24□□□□□ -0.77
CTNNA1-204ENST00000517656 SOCS4Q8WXH5 440 aa10.24□□□□□ -0.77
CTNNA1-204ENST00000517656 KIF1BPQ96EK5 621 aa10.24□□□□□ -0.77
CTNNA1-204ENST00000517656 C12orf42Q96LP6 360 aa10.24□□□□□ -0.77
CTNNA1-204ENST00000517656 RBPJLQ9UBG7 517 aa10.24□□□□□ -0.77
CTNNA1-204ENST00000517656 DDX19BQ9UMR2 479 aa10.24□□□□□ -0.77
CTNNA1-204ENST00000517656 NR2E3Q9Y5X4 410 aa10.24□□□□□ -0.77
CTNNA1-204ENST00000517656 LAMA3Q16787 3333 aa10.23□□□□□ -0.77
CTNNA1-204ENST00000517656 MYO5AQ9Y4I1 1855 aaKnown RBP10.23□□□□□ -0.77
CTNNA1-204ENST00000517656 TRIOBPQ9H2D6 2365 aa10.23□□□□□ -0.77
CTNNA1-204ENST00000517656 MAGEB6P1A0A0J9YX57 407 aa10.23□□□□□ -0.77
CTNNA1-204ENST00000517656 PEX10O60683 326 aa10.23□□□□□ -0.77
CTNNA1-204ENST00000517656 XRCC5P13010 732 aaKnown RBP10.23□□□□□ -0.77
CTNNA1-204ENST00000517656 PDE6AP16499 860 aa10.23□□□□□ -0.77
CTNNA1-204ENST00000517656 MAPK4P31152 587 aa10.23□□□□□ -0.77
CTNNA1-204ENST00000517656 SHMT1P34896 483 aa10.23□□□□□ -0.77
CTNNA1-204ENST00000517656 PLCD1P51178 756 aa10.23□□□□□ -0.77
CTNNA1-204ENST00000517656 USP14P54578 494 aa10.23□□□□□ -0.77
CTNNA1-204ENST00000517656 ERVK-9P63128 1117 aa10.23□□□□□ -0.77
CTNNA1-204ENST00000517656 ERVK-24P63145 666 aa10.23□□□□□ -0.77
CTNNA1-204ENST00000517656 ABCB5Q2M3G0 1257 aa10.23□□□□□ -0.77
CTNNA1-204ENST00000517656 CERKLQ49MI3 558 aaPredicted RBP10.23□□□□□ -0.77
CTNNA1-204ENST00000517656 SLC9C2Q5TAH2 1124 aa10.23□□□□□ -0.77
CTNNA1-204ENST00000517656 SIRT2Q8IXJ6 389 aa10.23□□□□□ -0.77
CTNNA1-204ENST00000517656 ANKLE1Q8NAG6 615 aa10.23□□□□□ -0.77
CTNNA1-204ENST00000517656 TRIB2Q92519 343 aa10.23□□□□□ -0.77
CTNNA1-204ENST00000517656 NUDT12Q9BQG2 462 aa10.23□□□□□ -0.77
CTNNA1-204ENST00000517656 HMX1Q9NP08 348 aaPredicted RBP10.23□□□□□ -0.77
CTNNA1-204ENST00000517656 ZBTB40Q9NUA8 1239 aa10.23□□□□□ -0.77
CTNNA1-204ENST00000517656 RPTORQ8N122 1335 aa10.23□□□□□ -0.77
CTNNA1-204ENST00000517656 TCRBV5S4A2TA0A5A2 114 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms