RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 IFT172Q9UG01 1749 aa7.5□□□□□ -1.21
CPNE3-203ENST00000517490 ANKRD26Q9UPS8 1709 aa7.5□□□□□ -1.21
CPNE3-203ENST00000517490 A0A087WUV0 522 aaPredicted RBP7.5□□□□□ -1.21
CPNE3-203ENST00000517490 ARHGAP25P42331 645 aa7.5□□□□□ -1.21
CPNE3-203ENST00000517490 MAP3K9P80192 1104 aa7.5□□□□□ -1.21
CPNE3-203ENST00000517490 ST3GAL1Q11201 340 aa7.5□□□□□ -1.21
CPNE3-203ENST00000517490 ZNF827Q17R98 1081 aa7.5□□□□□ -1.21
CPNE3-203ENST00000517490 TOGARAM2Q6ZUX3 1019 aa7.5□□□□□ -1.21
CPNE3-203ENST00000517490 OR8K1Q8NGG5 319 aa7.5□□□□□ -1.21
CPNE3-203ENST00000517490 ABCB6Q9NP58 842 aa7.5□□□□□ -1.21
CPNE3-203ENST00000517490 ABCF2Q9UG63 623 aa7.5□□□□□ -1.21
CPNE3-203ENST00000517490 MAP2P11137 1827 aaKnown RBP7.5□□□□□ -1.21
CPNE3-203ENST00000517490 GOLGA8KD6RF30 607 aa7.49□□□□□ -1.21
CPNE3-203ENST00000517490 EXOSC10Q01780 885 aaKnown RBP7.49□□□□□ -1.21
CPNE3-203ENST00000517490 RBL2Q08999 1139 aa7.49□□□□□ -1.21
CPNE3-203ENST00000517490 IFIT1BQ5T764 474 aaKnown RBP7.49□□□□□ -1.21
CPNE3-203ENST00000517490 NBPF14Q5TI25 921 aa7.49□□□□□ -1.21
CPNE3-203ENST00000517490 KRT28Q7Z3Y7 464 aa7.49□□□□□ -1.21
CPNE3-203ENST00000517490 SPATS2Q86XZ4 545 aaKnown RBP7.49□□□□□ -1.21
CPNE3-203ENST00000517490 ATRIPQ8WXE1 791 aa7.49□□□□□ -1.21
CPNE3-203ENST00000517490 TAB2Q9NYJ8 693 aa7.49□□□□□ -1.21
CPNE3-203ENST00000517490 TRMT112Q9UI30 125 aaKnown RBP7.49□□□□□ -1.21
CPNE3-203ENST00000517490 VWA3AA6NCI4 1184 aa7.49□□□□□ -1.21
CPNE3-203ENST00000517490 RNF40O75150 1001 aa7.49□□□□□ -1.21
CPNE3-203ENST00000517490 PPFIA4O75335 1185 aa7.49□□□□□ -1.21
CPNE3-203ENST00000517490 PPP1R2P41236 205 aa7.49□□□□□ -1.21
CPNE3-203ENST00000517490 CEBPAP49715 358 aaPredicted RBP7.49□□□□□ -1.21
CPNE3-203ENST00000517490 LONRF3Q496Y0 759 aa7.49□□□□□ -1.21
CPNE3-203ENST00000517490 CCDC121Q6ZUS5 278 aa7.49□□□□□ -1.21
CPNE3-203ENST00000517490 ARHGEF25Q86VW2 580 aa7.49□□□□□ -1.21
CPNE3-203ENST00000517490 SECISBP2LQ93073 1101 aaKnown RBP7.49□□□□□ -1.21
CPNE3-203ENST00000517490 ZNF496Q96IT1 587 aaPredicted RBP7.49□□□□□ -1.21
CPNE3-203ENST00000517490 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.49□□□□□ -1.21
CPNE3-203ENST00000517490 RBM28Q9NW13 759 aaKnown RBP7.49□□□□□ -1.21
CPNE3-203ENST00000517490 JRKLQ9Y4A0 524 aa7.49□□□□□ -1.21
CPNE3-203ENST00000517490 NCAPD2Q15021 1401 aa7.49□□□□□ -1.21
CPNE3-203ENST00000517490 SOWAHDA6NJG2 315 aa7.49□□□□□ -1.21
CPNE3-203ENST00000517490 TMEM232C9JQI7 657 aa7.49□□□□□ -1.21
CPNE3-203ENST00000517490 ZEB2O60315 1214 aa7.49□□□□□ -1.21
CPNE3-203ENST00000517490 CASP14P31944 242 aa7.49□□□□□ -1.21
CPNE3-203ENST00000517490 ZAP70P43403 619 aa7.49□□□□□ -1.21
CPNE3-203ENST00000517490 ICE2Q659A1 982 aa7.49□□□□□ -1.21
CPNE3-203ENST00000517490 ZNF594Q96JF6 807 aaPredicted RBP7.49□□□□□ -1.21
CPNE3-203ENST00000517490 FEZ2Q9UHY8 353 aaPredicted RBP7.49□□□□□ -1.21
CPNE3-203ENST00000517490 KCNJ14Q9UNX9 436 aa7.49□□□□□ -1.21
CPNE3-203ENST00000517490 PARP3Q9Y6F1 533 aa7.49□□□□□ -1.21
CPNE3-203ENST00000517490 MACROD2A1Z1Q3 448 aa7.49□□□□□ -1.21
CPNE3-203ENST00000517490 M0R2C6 588 aa7.49□□□□□ -1.21
CPNE3-203ENST00000517490 CIAO1O76071 339 aa7.49□□□□□ -1.21
CPNE3-203ENST00000517490 CALML3P27482 149 aa7.49□□□□□ -1.21
CPNE3-203ENST00000517490 GYS2P54840 703 aa7.49□□□□□ -1.21
CPNE3-203ENST00000517490 IFFO1Q0D2I5 559 aa7.49□□□□□ -1.21
CPNE3-203ENST00000517490 CCDC178Q5BJE1 867 aa7.49□□□□□ -1.21
CPNE3-203ENST00000517490 ANKRD18AQ8IVF6 992 aa7.49□□□□□ -1.21
CPNE3-203ENST00000517490 GSDMAQ96QA5 445 aa7.49□□□□□ -1.21
CPNE3-203ENST00000517490 SLC24A3Q9HC58 644 aa7.49□□□□□ -1.21
CPNE3-203ENST00000517490 KRT18P05783 430 aaKnown RBP7.48□□□□□ -1.21
CPNE3-203ENST00000517490 PTPN21Q16825 1174 aa7.48□□□□□ -1.21
CPNE3-203ENST00000517490 SND1Q7KZF4 910 aaKnown RBP eCLIP7.48□□□□□ -1.21
CPNE3-203ENST00000517490 SRLQ86TD4 932 aa7.48□□□□□ -1.21
CPNE3-203ENST00000517490 RGS22Q8NE09 1264 aa7.48□□□□□ -1.21
CPNE3-203ENST00000517490 NELFBQ8WX92 580 aa7.48□□□□□ -1.21
CPNE3-203ENST00000517490 CALML4Q96GE6 196 aa7.48□□□□□ -1.21
CPNE3-203ENST00000517490 MYL10Q9BUA6 226 aa7.48□□□□□ -1.21
CPNE3-203ENST00000517490 FOXP1Q9H334 677 aaPredicted RBP7.48□□□□□ -1.21
CPNE3-203ENST00000517490 EPN1Q9Y6I3 576 aaPredicted RBP7.48□□□□□ -1.21
CPNE3-203ENST00000517490 WDR19Q8NEZ3 1342 aa7.48□□□□□ -1.21
CPNE3-203ENST00000517490 KCNA6P17658 529 aa7.48□□□□□ -1.21
CPNE3-203ENST00000517490 ZNF174Q15697 407 aa7.48□□□□□ -1.21
CPNE3-203ENST00000517490 IFI16Q16666 785 aaKnown RBP7.48□□□□□ -1.21
CPNE3-203ENST00000517490 APOA5Q6Q788 366 aa7.48□□□□□ -1.21
CPNE3-203ENST00000517490 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.48□□□□□ -1.21
CPNE3-203ENST00000517490 IQCDQ96DY2 449 aa7.48□□□□□ -1.21
CPNE3-203ENST00000517490 WDR24Q96S15 920 aa7.48□□□□□ -1.21
CPNE3-203ENST00000517490 CAPS2Q9BXY5 557 aa7.48□□□□□ -1.21
CPNE3-203ENST00000517490 TUBE1Q9UJT0 475 aa7.48□□□□□ -1.21
CPNE3-203ENST00000517490 BTBD18B2RXH4 712 aa7.48□□□□□ -1.21
CPNE3-203ENST00000517490 SEMA3EO15041 775 aa7.48□□□□□ -1.21
CPNE3-203ENST00000517490 DNA2P51530 1060 aa7.48□□□□□ -1.21
CPNE3-203ENST00000517490 TBC1D8BQ0IIM8 1120 aa7.48□□□□□ -1.21
CPNE3-203ENST00000517490 STOX1Q6ZVD7 989 aa7.48□□□□□ -1.21
CPNE3-203ENST00000517490 RAB34Q9BZG1 259 aa7.48□□□□□ -1.21
CPNE3-203ENST00000517490 SAMSN1Q9NSI8 373 aaKnown RBP7.48□□□□□ -1.21
CPNE3-203ENST00000517490 TMOD3Q9NYL9 352 aa7.48□□□□□ -1.21
CPNE3-203ENST00000517490 PTPRUQ92729 1446 aa7.48□□□□□ -1.21
CPNE3-203ENST00000517490 KCNJ18B7U540 433 aa7.47□□□□□ -1.21
CPNE3-203ENST00000517490 MBD4O95243 580 aa7.47□□□□□ -1.21
CPNE3-203ENST00000517490 IGKV5-2P06315 115 aa7.47□□□□□ -1.21
CPNE3-203ENST00000517490 EZRP15311 586 aaKnown RBP7.47□□□□□ -1.21
CPNE3-203ENST00000517490 ST5P78524 1137 aa7.47□□□□□ -1.21
CPNE3-203ENST00000517490 MORC3Q14149 939 aa7.47□□□□□ -1.21
CPNE3-203ENST00000517490 KCNJ12Q14500 433 aa7.47□□□□□ -1.21
CPNE3-203ENST00000517490 TTC38Q5R3I4 469 aa7.47□□□□□ -1.21
CPNE3-203ENST00000517490 C8orf74Q6P047 294 aa7.47□□□□□ -1.21
CPNE3-203ENST00000517490 VPS36Q86VN1 386 aa7.47□□□□□ -1.21
CPNE3-203ENST00000517490 IFT20Q8IY31 132 aa7.47□□□□□ -1.21
CPNE3-203ENST00000517490 EPC1Q9H2F5 836 aa7.47□□□□□ -1.21
CPNE3-203ENST00000517490 TMEM51Q9NW97 253 aa7.47□□□□□ -1.21
CPNE3-203ENST00000517490 MFAP3LO75121 409 aa7.47□□□□□ -1.21
CPNE3-203ENST00000517490 SLC20A2Q08357 652 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms