RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 WDR18Q9BV38 432 aa16.99■□□□□ 0.31
PDGFRB-202ENST00000517488 TBC1D2Q9BYX2 928 aa16.99■□□□□ 0.31
PDGFRB-202ENST00000517488 RWDD1Q9H446 243 aaPredicted RBP16.99■□□□□ 0.31
PDGFRB-202ENST00000517488 EFCC1Q9HA90 598 aa16.99■□□□□ 0.31
PDGFRB-202ENST00000517488 ZBTB47Q9UFB7 747 aaPredicted RBP16.99■□□□□ 0.31
PDGFRB-202ENST00000517488 HTTP42858 3142 aa16.98■□□□□ 0.31
PDGFRB-202ENST00000517488 RNF113AO15541 343 aaKnown RBP16.98■□□□□ 0.31
PDGFRB-202ENST00000517488 OSBP2Q969R2 916 aa16.98■□□□□ 0.31
PDGFRB-202ENST00000517488 ARHGAP39Q9C0H5 1083 aa16.98■□□□□ 0.31
PDGFRB-202ENST00000517488 AS3MTQ9HBK9 375 aa16.98■□□□□ 0.31
PDGFRB-202ENST00000517488 ATP8A2Q9NTI2 1148 aa16.98■□□□□ 0.31
PDGFRB-202ENST00000517488 GINM1Q9NU53 330 aa16.98■□□□□ 0.31
PDGFRB-202ENST00000517488 AGTPBP1Q9UPW5 1226 aa16.98■□□□□ 0.31
PDGFRB-202ENST00000517488 SLC45A1Q9Y2W3 748 aa16.98■□□□□ 0.31
PDGFRB-202ENST00000517488 SLC4A4Q9Y6R1 1079 aa16.98■□□□□ 0.31
PDGFRB-202ENST00000517488 DOCK1Q14185 1865 aa16.97■□□□□ 0.31
PDGFRB-202ENST00000517488 CDK5RAP2Q96SN8 1893 aa16.97■□□□□ 0.31
PDGFRB-202ENST00000517488 SMIM22K7EJ46 135 aa16.97■□□□□ 0.31
PDGFRB-202ENST00000517488 IRX6P78412 446 aaPredicted RBP16.97■□□□□ 0.31
PDGFRB-202ENST00000517488 MTMR2Q13614 643 aa16.97■□□□□ 0.31
PDGFRB-202ENST00000517488 CERKLQ49MI3 558 aaPredicted RBP16.97■□□□□ 0.31
PDGFRB-202ENST00000517488 SMC5Q8IY18 1101 aa16.97■□□□□ 0.31
PDGFRB-202ENST00000517488 SLC44A5Q8NCS7 719 aa16.97■□□□□ 0.31
PDGFRB-202ENST00000517488 APPBP2Q92624 585 aa16.97■□□□□ 0.31
PDGFRB-202ENST00000517488 STRBPQ96SI9 672 aaKnown RBP16.97■□□□□ 0.31
PDGFRB-202ENST00000517488 LNPKQ9C0E8 428 aa16.97■□□□□ 0.31
PDGFRB-202ENST00000517488 STAP2Q9UGK3 403 aa16.97■□□□□ 0.31
PDGFRB-202ENST00000517488 FOCADQ5VW36 1801 aa16.96■□□□□ 0.31
PDGFRB-202ENST00000517488 CYP2D7A0A087X1C5 515 aa16.96■□□□□ 0.31
PDGFRB-202ENST00000517488 ECM2O94769 699 aaPredicted RBP16.96■□□□□ 0.31
PDGFRB-202ENST00000517488 BCRP11274 1271 aa16.96■□□□□ 0.31
PDGFRB-202ENST00000517488 BACE1P56817 501 aa16.96■□□□□ 0.31
PDGFRB-202ENST00000517488 LACTBP83111 547 aaPredicted RBP16.96■□□□□ 0.31
PDGFRB-202ENST00000517488 SH3D19Q5HYK7 790 aa16.96■□□□□ 0.31
PDGFRB-202ENST00000517488 B4GALNT3Q6L9W6 998 aa16.96■□□□□ 0.31
PDGFRB-202ENST00000517488 PROCA1Q8NCQ7 364 aaPredicted RBP16.96■□□□□ 0.31
PDGFRB-202ENST00000517488 DYNLL2Q96FJ2 89 aa16.96■□□□□ 0.31
PDGFRB-202ENST00000517488 PTPN22Q9Y2R2 807 aa16.96■□□□□ 0.31
PDGFRB-202ENST00000517488 USP17L12C9JPN9 530 aa16.95■□□□□ 0.3
PDGFRB-202ENST00000517488 USP17L21D6R901 530 aa16.95■□□□□ 0.3
PDGFRB-202ENST00000517488 M0R2C6 588 aa16.95■□□□□ 0.3
PDGFRB-202ENST00000517488 ZFYP08048 801 aaPredicted RBP16.95■□□□□ 0.3
PDGFRB-202ENST00000517488 CTGFP29279 349 aa16.95■□□□□ 0.3
PDGFRB-202ENST00000517488 PDE1AP54750 535 aa16.95■□□□□ 0.3
PDGFRB-202ENST00000517488 RAB3GAP1Q15042 981 aa16.95■□□□□ 0.3
PDGFRB-202ENST00000517488 ABCB5Q2M3G0 1257 aa16.95■□□□□ 0.3
PDGFRB-202ENST00000517488 USP17L10C9JJH3 530 aa16.94■□□□□ 0.3
PDGFRB-202ENST00000517488 GUCY1A2P33402 732 aa16.94■□□□□ 0.3
PDGFRB-202ENST00000517488 C12orf60Q5U649 245 aa16.94■□□□□ 0.3
PDGFRB-202ENST00000517488 CTR9Q6PD62 1173 aa16.94■□□□□ 0.3
PDGFRB-202ENST00000517488 FSD1Q9BTV5 496 aa16.94■□□□□ 0.3
PDGFRB-202ENST00000517488 PHIPQ8WWQ0 1821 aa16.93■□□□□ 0.3
PDGFRB-202ENST00000517488 GSG1L2A8MUP6 293 aa16.93■□□□□ 0.3
PDGFRB-202ENST00000517488 C19orf81C9J6K1 198 aa16.93■□□□□ 0.3
PDGFRB-202ENST00000517488 GPAA1O43292 621 aa16.93■□□□□ 0.3
PDGFRB-202ENST00000517488 KIF22Q14807 665 aa16.93■□□□□ 0.3
PDGFRB-202ENST00000517488 ARHGEF6Q15052 776 aa16.93■□□□□ 0.3
PDGFRB-202ENST00000517488 ACER1Q8TDN7 264 aa16.93■□□□□ 0.3
PDGFRB-202ENST00000517488 SMCR8Q8TEV9 937 aaPredicted RBP16.93■□□□□ 0.3
PDGFRB-202ENST00000517488 DDRGK1Q96HY6 314 aa16.93■□□□□ 0.3
PDGFRB-202ENST00000517488 TRIM47Q96LD4 638 aa16.93■□□□□ 0.3
PDGFRB-202ENST00000517488 SEC62Q99442 399 aaKnown RBP16.93■□□□□ 0.3
PDGFRB-202ENST00000517488 CABP5Q9NP86 173 aa16.93■□□□□ 0.3
PDGFRB-202ENST00000517488 EMILIN3Q9NT22 766 aa16.93■□□□□ 0.3
PDGFRB-202ENST00000517488 TMOD4Q9NZQ9 345 aa16.93■□□□□ 0.3
PDGFRB-202ENST00000517488 MYH1P12882 1939 aa16.92■□□□□ 0.3
PDGFRB-202ENST00000517488 PSMC4P43686 418 aa16.92■□□□□ 0.3
PDGFRB-202ENST00000517488 SOX10P56693 466 aa16.92■□□□□ 0.3
PDGFRB-202ENST00000517488 NUCB1Q02818 461 aa16.92■□□□□ 0.3
PDGFRB-202ENST00000517488 SEPT2Q15019 361 aa16.92■□□□□ 0.3
PDGFRB-202ENST00000517488 LRRFIP1Q32MZ4 808 aaKnown RBP16.92■□□□□ 0.3
PDGFRB-202ENST00000517488 ZMYM1Q5SVZ6 1142 aa16.92■□□□□ 0.3
PDGFRB-202ENST00000517488 CHD1LQ86WJ1 897 aa16.92■□□□□ 0.3
PDGFRB-202ENST00000517488 ASCC2Q9H1I8 757 aaPredicted RBP16.92■□□□□ 0.3
PDGFRB-202ENST00000517488 SWAP70Q9UH65 585 aa16.92■□□□□ 0.3
PDGFRB-202ENST00000517488 PNMA3Q9UL41 463 aa16.92■□□□□ 0.3
PDGFRB-202ENST00000517488 PTCH2Q9Y6C5 1203 aa16.92■□□□□ 0.3
PDGFRB-202ENST00000517488 DDX60LQ5H9U9 1706 aaKnown RBP16.92■□□□□ 0.3
PDGFRB-202ENST00000517488 MPHOSPH10O00566 681 aaKnown RBP16.91■□□□□ 0.3
PDGFRB-202ENST00000517488 AKR1B1P15121 316 aa16.91■□□□□ 0.3
PDGFRB-202ENST00000517488 OSBPP22059 807 aa16.91■□□□□ 0.3
PDGFRB-202ENST00000517488 CDK8P49336 464 aa16.91■□□□□ 0.3
PDGFRB-202ENST00000517488 PABPC4Q13310 644 aaKnown RBP eCLIP16.91■□□□□ 0.3
PDGFRB-202ENST00000517488 ZYXQ15942 572 aaKnown RBP16.91■□□□□ 0.3
PDGFRB-202ENST00000517488 USP17L2Q6R6M4 530 aa16.91■□□□□ 0.3
PDGFRB-202ENST00000517488 EPB41L4AQ9HCS5 686 aaPredicted RBP16.91■□□□□ 0.3
PDGFRB-202ENST00000517488 CENPFP49454 3210 aa16.91■□□□□ 0.3
PDGFRB-202ENST00000517488 FMNL1O95466 1100 aaPredicted RBP16.9■□□□□ 0.3
PDGFRB-202ENST00000517488 HOXA7P31268 230 aaPredicted RBP16.9■□□□□ 0.3
PDGFRB-202ENST00000517488 GIMAP6Q6P9H5 292 aa16.9■□□□□ 0.3
PDGFRB-202ENST00000517488 C16orf86Q6ZW13 317 aa16.9■□□□□ 0.3
PDGFRB-202ENST00000517488 AMOTL1Q8IY63 956 aa16.9■□□□□ 0.3
PDGFRB-202ENST00000517488 ANKRD13CQ8N6S4 541 aa16.9■□□□□ 0.3
PDGFRB-202ENST00000517488 EVI5LQ96CN4 794 aa16.9■□□□□ 0.3
PDGFRB-202ENST00000517488 FEZ1Q99689 392 aa16.9■□□□□ 0.3
PDGFRB-202ENST00000517488 TAOK2Q9UL54 1235 aa16.9■□□□□ 0.3
PDGFRB-202ENST00000517488 NAV1Q8NEY1 1877 aa16.89■□□□□ 0.29
PDGFRB-202ENST00000517488 A0A1W2PRG0 241 aa16.89■□□□□ 0.29
PDGFRB-202ENST00000517488 GNRH1P01148 92 aa16.89■□□□□ 0.29
PDGFRB-202ENST00000517488 GNAT2P19087 354 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms