RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 C10orf67Q8IYJ2 551 aa12.22□□□□□ -0.45
PCDHGA1-202ENST00000517417 TRMT44Q8IYL2 757 aaKnown RBP12.22□□□□□ -0.45
PCDHGA1-202ENST00000517417 CERKQ8TCT0 537 aa12.22□□□□□ -0.45
PCDHGA1-202ENST00000517417 CCNL1Q9UK58 526 aaPredicted RBP12.22□□□□□ -0.45
PCDHGA1-202ENST00000517417 FER1L4A9Z1Z3 1794 aa12.22□□□□□ -0.45
PCDHGA1-202ENST00000517417 GSTTP1A0A1W2PQM5 241 aa12.22□□□□□ -0.45
PCDHGA1-202ENST00000517417 hCG_1642624A0A1W2PR95 340 aa12.22□□□□□ -0.45
PCDHGA1-202ENST00000517417 CUTAO60888 179 aa12.22□□□□□ -0.45
PCDHGA1-202ENST00000517417 HIBADHP31937 336 aaKnown RBP12.22□□□□□ -0.45
PCDHGA1-202ENST00000517417 GOPCQ9HD26 462 aa12.22□□□□□ -0.45
PCDHGA1-202ENST00000517417 ANKARQ7Z5J8 1434 aa12.21□□□□□ -0.45
PCDHGA1-202ENST00000517417 PHACTR2O75167 634 aa12.21□□□□□ -0.45
PCDHGA1-202ENST00000517417 PTPN12Q05209 780 aaKnown RBP12.21□□□□□ -0.45
PCDHGA1-202ENST00000517417 MAP9Q49MG5 647 aa12.21□□□□□ -0.45
PCDHGA1-202ENST00000517417 CNBD1Q8NA66 436 aa12.21□□□□□ -0.45
PCDHGA1-202ENST00000517417 DESI2Q9BSY9 194 aa12.21□□□□□ -0.45
PCDHGA1-202ENST00000517417 POLR3EQ9NVU0 708 aa12.21□□□□□ -0.45
PCDHGA1-202ENST00000517417 ATP1A3P13637 1013 aa12.21□□□□□ -0.45
PCDHGA1-202ENST00000517417 GPR161Q8N6U8 529 aaKnown RBP12.21□□□□□ -0.45
PCDHGA1-202ENST00000517417 KCNB2Q92953 911 aa12.21□□□□□ -0.45
PCDHGA1-202ENST00000517417 ALS2CR12Q96Q35 445 aa12.21□□□□□ -0.45
PCDHGA1-202ENST00000517417 ANKRD2Q9GZV1 360 aa12.21□□□□□ -0.45
PCDHGA1-202ENST00000517417 BCCIPQ9P287 314 aaKnown RBP eCLIP12.21□□□□□ -0.45
PCDHGA1-202ENST00000517417 KNDC1Q76NI1 1749 aa12.21□□□□□ -0.46
PCDHGA1-202ENST00000517417 IGKV5-2P06315 115 aa12.21□□□□□ -0.46
PCDHGA1-202ENST00000517417 TSGA10IPQ3SY00 556 aa12.21□□□□□ -0.46
PCDHGA1-202ENST00000517417 ZMYM1Q5SVZ6 1142 aa12.21□□□□□ -0.46
PCDHGA1-202ENST00000517417 SMARCC2Q8TAQ2 1214 aa12.21□□□□□ -0.46
PCDHGA1-202ENST00000517417 RRP36Q96EU6 259 aaKnown RBP12.21□□□□□ -0.46
PCDHGA1-202ENST00000517417 OSBPL5Q9H0X9 879 aaPredicted RBP12.21□□□□□ -0.46
PCDHGA1-202ENST00000517417 PNMA6AP0CW24 399 aaPredicted RBP12.2□□□□□ -0.46
PCDHGA1-202ENST00000517417 CTDSPL2Q05D32 466 aa12.2□□□□□ -0.46
PCDHGA1-202ENST00000517417 SPAG1Q07617 926 aa12.2□□□□□ -0.46
PCDHGA1-202ENST00000517417 PARP10Q53GL7 1025 aa12.2□□□□□ -0.46
PCDHGA1-202ENST00000517417 KRT79Q5XKE5 535 aa12.2□□□□□ -0.46
PCDHGA1-202ENST00000517417 ZNF772Q68DY9 489 aaPredicted RBP12.2□□□□□ -0.46
PCDHGA1-202ENST00000517417 DTHD1Q6ZMT9 781 aa12.2□□□□□ -0.46
PCDHGA1-202ENST00000517417 ERMNQ8TAM6 284 aa12.2□□□□□ -0.46
PCDHGA1-202ENST00000517417 IL17RAQ96F46 866 aa12.2□□□□□ -0.46
PCDHGA1-202ENST00000517417 CLIC6Q96NY7 704 aa12.2□□□□□ -0.46
PCDHGA1-202ENST00000517417 CTAGE1Q96RT6 745 aa12.2□□□□□ -0.46
PCDHGA1-202ENST00000517417 MAST3O60307 1309 aa12.2□□□□□ -0.46
PCDHGA1-202ENST00000517417 PHLPP2Q6ZVD8 1323 aa12.2□□□□□ -0.46
PCDHGA1-202ENST00000517417 POLR2DO15514 142 aaKnown RBP12.2□□□□□ -0.46
PCDHGA1-202ENST00000517417 LETM2Q2VYF4 491 aa12.2□□□□□ -0.46
PCDHGA1-202ENST00000517417 TEX11Q8IYF3 940 aa12.2□□□□□ -0.46
PCDHGA1-202ENST00000517417 FMR1NBQ8N0W7 255 aaPredicted RBP12.2□□□□□ -0.46
PCDHGA1-202ENST00000517417 GPHNQ9NQX3 736 aaPredicted RBP12.2□□□□□ -0.46
PCDHGA1-202ENST00000517417 ST7Q9NRC1 585 aa12.2□□□□□ -0.46
PCDHGA1-202ENST00000517417 AATFQ9NY61 560 aaKnown RBP eCLIP12.2□□□□□ -0.46
PCDHGA1-202ENST00000517417 DENND2AQ9ULE3 1009 aa12.2□□□□□ -0.46
PCDHGA1-202ENST00000517417 UFL1O94874 794 aa12.2□□□□□ -0.46
PCDHGA1-202ENST00000517417 PHKG2P15735 406 aa12.2□□□□□ -0.46
PCDHGA1-202ENST00000517417 IFFO1Q0D2I5 559 aa12.2□□□□□ -0.46
PCDHGA1-202ENST00000517417 HDXQ7Z353 690 aa12.2□□□□□ -0.46
PCDHGA1-202ENST00000517417 DIS3L2Q8IYB7 885 aaKnown RBP12.2□□□□□ -0.46
PCDHGA1-202ENST00000517417 IGSF22Q8N9C0 903 aa12.2□□□□□ -0.46
PCDHGA1-202ENST00000517417 MAPK8IP1Q9UQF2 711 aa12.2□□□□□ -0.46
PCDHGA1-202ENST00000517417 RTL9Q8NET4 1388 aa12.2□□□□□ -0.46
PCDHGA1-202ENST00000517417 CEP170BQ9Y4F5 1589 aaPredicted RBP12.2□□□□□ -0.46
PCDHGA1-202ENST00000517417 CHGBP05060 677 aa12.2□□□□□ -0.46
PCDHGA1-202ENST00000517417 IVLP07476 585 aa12.2□□□□□ -0.46
PCDHGA1-202ENST00000517417 SPECC1LQ69YQ0 1117 aa12.2□□□□□ -0.46
PCDHGA1-202ENST00000517417 IQUBQ8NA54 791 aa12.2□□□□□ -0.46
PCDHGA1-202ENST00000517417 LPIN2Q92539 896 aa12.2□□□□□ -0.46
PCDHGA1-202ENST00000517417 LRRC27Q9C0I9 530 aa12.2□□□□□ -0.46
PCDHGA1-202ENST00000517417 RSPH14Q9UHP6 348 aa12.2□□□□□ -0.46
PCDHGA1-202ENST00000517417 ZNF532Q9HCE3 1301 aa12.19□□□□□ -0.46
PCDHGA1-202ENST00000517417 RIMS1Q86UR5 1692 aaKnown RBP12.19□□□□□ -0.46
PCDHGA1-202ENST00000517417 IKBKBO14920 756 aa12.19□□□□□ -0.46
PCDHGA1-202ENST00000517417 PLCG2P16885 1265 aa12.19□□□□□ -0.46
PCDHGA1-202ENST00000517417 ADD1P35611 737 aaKnown RBP12.19□□□□□ -0.46
PCDHGA1-202ENST00000517417 TCIRG1Q13488 830 aa12.19□□□□□ -0.46
PCDHGA1-202ENST00000517417 MED23Q9ULK4 1368 aa12.19□□□□□ -0.46
PCDHGA1-202ENST00000517417 WDHD1O75717 1129 aaPredicted RBP12.19□□□□□ -0.46
PCDHGA1-202ENST00000517417 POSTNQ15063 836 aa12.19□□□□□ -0.46
PCDHGA1-202ENST00000517417 RBM43Q6ZSC3 357 aaKnown RBP12.19□□□□□ -0.46
PCDHGA1-202ENST00000517417 STXBP4Q6ZWJ1 553 aa12.19□□□□□ -0.46
PCDHGA1-202ENST00000517417 RASSF4Q9H2L5 321 aa12.19□□□□□ -0.46
PCDHGA1-202ENST00000517417 SPDYE3A6NKU9 549 aa12.19□□□□□ -0.46
PCDHGA1-202ENST00000517417 M0R2C6 588 aa12.19□□□□□ -0.46
PCDHGA1-202ENST00000517417 LRRC24Q50LG9 513 aa12.19□□□□□ -0.46
PCDHGA1-202ENST00000517417 ARMCX5Q6P1M9 558 aa12.19□□□□□ -0.46
PCDHGA1-202ENST00000517417 STOX1Q6ZVD7 989 aa12.19□□□□□ -0.46
PCDHGA1-202ENST00000517417 GJB4Q9NTQ9 266 aa12.19□□□□□ -0.46
PCDHGA1-202ENST00000517417 CCDC87Q9NVE4 849 aa12.19□□□□□ -0.46
PCDHGA1-202ENST00000517417 FGAP02671 866 aa12.18□□□□□ -0.46
PCDHGA1-202ENST00000517417 MCM3P25205 808 aa12.18□□□□□ -0.46
PCDHGA1-202ENST00000517417 GNA11P29992 359 aa12.18□□□□□ -0.46
PCDHGA1-202ENST00000517417 ZNF827Q17R98 1081 aa12.18□□□□□ -0.46
PCDHGA1-202ENST00000517417 MLKLQ8NB16 471 aa12.18□□□□□ -0.46
PCDHGA1-202ENST00000517417 DYDC1Q8WWB3 177 aa12.18□□□□□ -0.46
PCDHGA1-202ENST00000517417 TMEM87BQ96K49 555 aa12.18□□□□□ -0.46
PCDHGA1-202ENST00000517417 ADGRL3Q9HAR2 1447 aa12.18□□□□□ -0.46
PCDHGA1-202ENST00000517417 DESP17661 470 aa12.18□□□□□ -0.46
PCDHGA1-202ENST00000517417 SLC39A14Q15043 492 aa12.18□□□□□ -0.46
PCDHGA1-202ENST00000517417 USP21Q9UK80 565 aa12.18□□□□□ -0.46
PCDHGA1-202ENST00000517417 KIF23Q02241 960 aaPredicted RBP12.18□□□□□ -0.46
PCDHGA1-202ENST00000517417 ZSCAN26Q16670 478 aa12.18□□□□□ -0.46
PCDHGA1-202ENST00000517417 E4F1Q66K89 784 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms