RNA–Protein interactions for RNA: ENST00000517400.5

LINC00534-201, long intergenic non-protein coding RNA 534, humanhuman

TSL 2 BASIC

Gene LINC00534, Length 793 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-201ENST00000517400 DHX38Q92620 1227 aaKnown RBP6.75□□□□□ -1.33
LINC00534-201ENST00000517400 CRBNQ96SW2 442 aa6.75□□□□□ -1.33
LINC00534-201ENST00000517400 FAM105AQ9NUU6 356 aa6.75□□□□□ -1.33
LINC00534-201ENST00000517400 REV1Q9UBZ9 1251 aa6.75□□□□□ -1.33
LINC00534-201ENST00000517400 ARAP1Q96P48 1450 aa6.74□□□□□ -1.33
LINC00534-201ENST00000517400 TDRD9Q8NDG6 1382 aaKnown RBP6.74□□□□□ -1.33
LINC00534-201ENST00000517400 CHD1O14646 1710 aa6.74□□□□□ -1.33
LINC00534-201ENST00000517400 MEIS3P2A8K0S8 358 aa6.74□□□□□ -1.33
LINC00534-201ENST00000517400 HCLS1P14317 486 aaPredicted RBP6.74□□□□□ -1.33
LINC00534-201ENST00000517400 ETFBP38117 255 aa6.74□□□□□ -1.33
LINC00534-201ENST00000517400 FBXW10Q5XX13 1052 aa6.74□□□□□ -1.33
LINC00534-201ENST00000517400 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.74□□□□□ -1.33
LINC00534-201ENST00000517400 HID1Q8IV36 788 aa6.74□□□□□ -1.33
LINC00534-201ENST00000517400 MCATQ8IVS2 390 aaKnown RBP6.74□□□□□ -1.33
LINC00534-201ENST00000517400 ACSF2Q96CM8 615 aaPredicted RBP6.74□□□□□ -1.33
LINC00534-201ENST00000517400 HIRIP3Q9BW71 556 aaPredicted RBP6.74□□□□□ -1.33
LINC00534-201ENST00000517400 ACSS3Q9H6R3 686 aa6.74□□□□□ -1.33
LINC00534-201ENST00000517400 ZNF408Q9H9D4 720 aa6.74□□□□□ -1.33
LINC00534-201ENST00000517400 PIDD1Q9HB75 910 aa6.74□□□□□ -1.33
LINC00534-201ENST00000517400 SLC22A31A6NKX4 558 aa6.73□□□□□ -1.33
LINC00534-201ENST00000517400 IGHA1P01876 353 aa6.73□□□□□ -1.33
LINC00534-201ENST00000517400 CAP2P40123 477 aa6.73□□□□□ -1.33
LINC00534-201ENST00000517400 USP11P51784 963 aa6.73□□□□□ -1.33
LINC00534-201ENST00000517400 PLA2G4EQ3MJ16 856 aa6.73□□□□□ -1.33
LINC00534-201ENST00000517400 SOGA3Q5TF21 947 aa6.73□□□□□ -1.33
LINC00534-201ENST00000517400 SLC6A19Q695T7 634 aa6.73□□□□□ -1.33
LINC00534-201ENST00000517400 CDC37L1Q7L3B6 337 aa6.73□□□□□ -1.33
LINC00534-201ENST00000517400 CD163Q86VB7 1156 aa6.73□□□□□ -1.33
LINC00534-201ENST00000517400 MRPL41Q8IXM3 137 aaKnown RBP6.73□□□□□ -1.33
LINC00534-201ENST00000517400 SMYD4Q8IYR2 804 aaPredicted RBP6.73□□□□□ -1.33
LINC00534-201ENST00000517400 EZH1Q92800 747 aaPredicted RBP6.73□□□□□ -1.33
LINC00534-201ENST00000517400 ISL2Q96A47 359 aa6.73□□□□□ -1.33
LINC00534-201ENST00000517400 MEGF10Q96KG7 1140 aa6.73□□□□□ -1.33
LINC00534-201ENST00000517400 GMIPQ9P107 970 aa6.73□□□□□ -1.33
LINC00534-201ENST00000517400 TJP2Q9UDY2 1190 aa6.73□□□□□ -1.33
LINC00534-201ENST00000517400 PCOLCE2Q9UKZ9 415 aa6.73□□□□□ -1.33
LINC00534-201ENST00000517400 MRVI1Q9Y6F6 885 aa6.73□□□□□ -1.33
LINC00534-201ENST00000517400 RAD54L2Q9Y4B4 1467 aa6.73□□□□□ -1.33
LINC00534-201ENST00000517400 C1QTNF9BB2RNN3 333 aa6.72□□□□□ -1.33
LINC00534-201ENST00000517400 GAS2O43903 313 aaKnown RBP6.72□□□□□ -1.33
LINC00534-201ENST00000517400 RNGTTO60942 597 aaKnown RBP6.72□□□□□ -1.33
LINC00534-201ENST00000517400 CHRNA4P43681 627 aa6.72□□□□□ -1.33
LINC00534-201ENST00000517400 CDCP2Q5VXM1 449 aa6.72□□□□□ -1.33
LINC00534-201ENST00000517400 INTS3Q68E01 1043 aaKnown RBP6.72□□□□□ -1.33
LINC00534-201ENST00000517400 CDPF1Q6NVV7 123 aa6.72□□□□□ -1.33
LINC00534-201ENST00000517400 LSRQ86X29 649 aaPredicted RBP6.72□□□□□ -1.33
LINC00534-201ENST00000517400 ARMC10Q8N2F6 343 aa6.72□□□□□ -1.33
LINC00534-201ENST00000517400 TAB3Q8N5C8 712 aaPredicted RBP6.72□□□□□ -1.33
LINC00534-201ENST00000517400 TMEM40Q8WWA1 233 aa6.72□□□□□ -1.33
LINC00534-201ENST00000517400 ANAPC16Q96DE5 110 aa6.72□□□□□ -1.33
LINC00534-201ENST00000517400 TMEM87BQ96K49 555 aa6.72□□□□□ -1.33
LINC00534-201ENST00000517400 MYRFLQ96LU7 910 aa6.72□□□□□ -1.33
LINC00534-201ENST00000517400 TM9SF2Q99805 663 aa6.72□□□□□ -1.33
LINC00534-201ENST00000517400 SSBP4Q9BWG4 385 aaPredicted RBP6.72□□□□□ -1.33
LINC00534-201ENST00000517400 YIPF2Q9BWQ6 316 aa6.72□□□□□ -1.33
LINC00534-201ENST00000517400 FBRSQ9HAH7 460 aa6.72□□□□□ -1.33
LINC00534-201ENST00000517400 PRKAG3Q9UGI9 489 aa6.72□□□□□ -1.33
LINC00534-201ENST00000517400 DNMBPQ6XZF7 1577 aa6.71□□□□□ -1.34
LINC00534-201ENST00000517400 DNAJA2O60884 412 aa6.71□□□□□ -1.34
LINC00534-201ENST00000517400 SLBPQ14493 270 aaKnown RBP eCLIP6.71□□□□□ -1.34
LINC00534-201ENST00000517400 TNNI3KQ59H18 835 aa6.71□□□□□ -1.34
LINC00534-201ENST00000517400 SLFN12Q8IYM2 578 aa6.71□□□□□ -1.34
LINC00534-201ENST00000517400 ATG4CQ96DT6 458 aa6.71□□□□□ -1.34
LINC00534-201ENST00000517400 SEMA6CQ9H3T2 930 aa6.71□□□□□ -1.34
LINC00534-201ENST00000517400 ANTXR1Q9H6X2 564 aa6.71□□□□□ -1.34
LINC00534-201ENST00000517400 SSU72Q9NP77 194 aaKnown RBP6.71□□□□□ -1.34
LINC00534-201ENST00000517400 PRDM2Q13029 1718 aa6.7□□□□□ -1.34
LINC00534-201ENST00000517400 CHURC1-FNTBB4DL54 471 aa6.7□□□□□ -1.34
LINC00534-201ENST00000517400 PROCP04070 461 aa6.7□□□□□ -1.34
LINC00534-201ENST00000517400 BMP3P12645 472 aa6.7□□□□□ -1.34
LINC00534-201ENST00000517400 YARSP54577 528 aaKnown RBP6.7□□□□□ -1.34
LINC00534-201ENST00000517400 CASP7P55210 303 aa6.7□□□□□ -1.34
LINC00534-201ENST00000517400 NKG7Q16617 165 aa6.7□□□□□ -1.34
LINC00534-201ENST00000517400 NBPF6Q5VWK0 638 aa6.7□□□□□ -1.34
LINC00534-201ENST00000517400 OVOS1Q6IE37 1185 aa6.7□□□□□ -1.34
LINC00534-201ENST00000517400 NLRC3Q7RTR2 1065 aa6.7□□□□□ -1.34
LINC00534-201ENST00000517400 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.7□□□□□ -1.34
LINC00534-201ENST00000517400 FAM20CQ8IXL6 584 aa6.7□□□□□ -1.34
LINC00534-201ENST00000517400 CKAP2LQ8IYA6 745 aa6.7□□□□□ -1.34
LINC00534-201ENST00000517400 FAM169BQ8N8A8 192 aa6.7□□□□□ -1.34
LINC00534-201ENST00000517400 C19orf47Q8N9M1 422 aaKnown RBP6.7□□□□□ -1.34
LINC00534-201ENST00000517400 UTP4Q969X6 686 aaKnown RBP6.7□□□□□ -1.34
LINC00534-201ENST00000517400 NBPF4Q96M43 638 aa6.7□□□□□ -1.34
LINC00534-201ENST00000517400 DNAJC2Q99543 621 aaKnown RBP6.7□□□□□ -1.34
LINC00534-201ENST00000517400 CNNM2Q9H8M5 875 aa6.7□□□□□ -1.34
LINC00534-201ENST00000517400 SNAPC4Q5SXM2 1469 aa6.7□□□□□ -1.34
LINC00534-201ENST00000517400 ABCC8Q09428 1581 aa6.69□□□□□ -1.34
LINC00534-201ENST00000517400 SOGA1O94964 1423 aa6.69□□□□□ -1.34
LINC00534-201ENST00000517400 POLA1P09884 1462 aaPredicted RBP6.69□□□□□ -1.34
LINC00534-201ENST00000517400 UPK3BL1B0FP48 263 aa6.69□□□□□ -1.34
LINC00534-201ENST00000517400 UPK3BL2E5RIL1 263 aa6.69□□□□□ -1.34
LINC00534-201ENST00000517400 TNFRSF10CO14798 259 aa6.69□□□□□ -1.34
LINC00534-201ENST00000517400 SMAD7O15105 426 aaKnown RBP6.69□□□□□ -1.34
LINC00534-201ENST00000517400 KLF4O43474 513 aa6.69□□□□□ -1.34
LINC00534-201ENST00000517400 LRIG2O94898 1065 aa6.69□□□□□ -1.34
LINC00534-201ENST00000517400 CST3P01034 146 aaPredicted RBP6.69□□□□□ -1.34
LINC00534-201ENST00000517400 NFICP08651 508 aa6.69□□□□□ -1.34
LINC00534-201ENST00000517400 NME1P15531 152 aaKnown RBP6.69□□□□□ -1.34
LINC00534-201ENST00000517400 RAB6AP20340 208 aa6.69□□□□□ -1.34
LINC00534-201ENST00000517400 GUCY2CP25092 1073 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms