RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 ADGRA2Q96PE1 1338 aa8.99□□□□□ -0.97
TNFRSF11B-202ENST00000517352 GDF11O95390 407 aa8.98□□□□□ -0.97
TNFRSF11B-202ENST00000517352 SLURP2P0DP57 97 aa8.98□□□□□ -0.97
TNFRSF11B-202ENST00000517352 ZKSCAN1P17029 563 aaPredicted RBP8.98□□□□□ -0.97
TNFRSF11B-202ENST00000517352 CYP7A1P22680 504 aa8.98□□□□□ -0.97
TNFRSF11B-202ENST00000517352 MAPK4P31152 587 aa8.98□□□□□ -0.97
TNFRSF11B-202ENST00000517352 BACE1P56817 501 aa8.98□□□□□ -0.97
TNFRSF11B-202ENST00000517352 RHBDL3P58872 404 aa8.98□□□□□ -0.97
TNFRSF11B-202ENST00000517352 MAP3K10Q02779 954 aa8.98□□□□□ -0.97
TNFRSF11B-202ENST00000517352 MAP3K12Q12852 859 aa8.98□□□□□ -0.97
TNFRSF11B-202ENST00000517352 MTX1Q13505 466 aa8.98□□□□□ -0.97
TNFRSF11B-202ENST00000517352 RAB3GAP1Q15042 981 aa8.98□□□□□ -0.97
TNFRSF11B-202ENST00000517352 ANKLE1Q8NAG6 615 aa8.98□□□□□ -0.97
TNFRSF11B-202ENST00000517352 SLC17A8Q8NDX2 589 aa8.98□□□□□ -0.97
TNFRSF11B-202ENST00000517352 GTF3C2Q8WUA4 911 aaPredicted RBP8.98□□□□□ -0.97
TNFRSF11B-202ENST00000517352 C11orf49Q9H6J7 331 aa8.98□□□□□ -0.97
TNFRSF11B-202ENST00000517352 PRKAG2Q9UGJ0 569 aa8.98□□□□□ -0.97
TNFRSF11B-202ENST00000517352 STAP2Q9UGK3 403 aa8.98□□□□□ -0.97
TNFRSF11B-202ENST00000517352 PALD1Q9ULE6 856 aa8.98□□□□□ -0.97
TNFRSF11B-202ENST00000517352 IVNS1ABPQ9Y6Y0 642 aa8.98□□□□□ -0.97
TNFRSF11B-202ENST00000517352 ZNF646O15015 1829 aaPredicted RBP8.98□□□□□ -0.97
TNFRSF11B-202ENST00000517352 CCER2I3L3R5 266 aa8.97□□□□□ -0.97
TNFRSF11B-202ENST00000517352 MPHOSPH10O00566 681 aaKnown RBP8.97□□□□□ -0.97
TNFRSF11B-202ENST00000517352 ZBTB7BO15156 539 aaPredicted RBP8.97□□□□□ -0.97
TNFRSF11B-202ENST00000517352 BCAR3O75815 825 aa8.97□□□□□ -0.97
TNFRSF11B-202ENST00000517352 POLR3DP05423 398 aaPredicted RBP8.97□□□□□ -0.97
TNFRSF11B-202ENST00000517352 TRIM27P14373 513 aa8.97□□□□□ -0.97
TNFRSF11B-202ENST00000517352 ARID4AP29374 1257 aaPredicted RBP8.97□□□□□ -0.97
TNFRSF11B-202ENST00000517352 CNGA1P29973 690 aa8.97□□□□□ -0.97
TNFRSF11B-202ENST00000517352 RGS2P41220 211 aa8.97□□□□□ -0.97
TNFRSF11B-202ENST00000517352 MCAMP43121 646 aa8.97□□□□□ -0.97
TNFRSF11B-202ENST00000517352 EVX2Q03828 476 aa8.97□□□□□ -0.97
TNFRSF11B-202ENST00000517352 ZYXQ15942 572 aaKnown RBP8.97□□□□□ -0.97
TNFRSF11B-202ENST00000517352 TNNI3KQ59H18 835 aa8.97□□□□□ -0.97
TNFRSF11B-202ENST00000517352 USP17L2Q6R6M4 530 aa8.97□□□□□ -0.97
TNFRSF11B-202ENST00000517352 TTC6Q86TZ1 520 aa8.97□□□□□ -0.97
TNFRSF11B-202ENST00000517352 AMOTL1Q8IY63 956 aa8.97□□□□□ -0.97
TNFRSF11B-202ENST00000517352 LBHD1Q9BQE6 289 aaPredicted RBP8.97□□□□□ -0.97
TNFRSF11B-202ENST00000517352 GINM1Q9NU53 330 aa8.97□□□□□ -0.97
TNFRSF11B-202ENST00000517352 FPGT-TNNI3KV9GXZ4 949 aa8.97□□□□□ -0.97
TNFRSF11B-202ENST00000517352 ATRNL1Q5VV63 1379 aa8.97□□□□□ -0.97
TNFRSF11B-202ENST00000517352 ARAP2Q8WZ64 1704 aa8.97□□□□□ -0.97
TNFRSF11B-202ENST00000517352 BRCA2P51587 3418 aa8.96□□□□□ -0.98
TNFRSF11B-202ENST00000517352 PNMA6EA0A0J9YXQ4 647 aa8.96□□□□□ -0.98
TNFRSF11B-202ENST00000517352 A0A1W2PPC1 479 aa8.96□□□□□ -0.98
TNFRSF11B-202ENST00000517352 USP14P54578 494 aa8.96□□□□□ -0.98
TNFRSF11B-202ENST00000517352 HERVK_113P62684 666 aa8.96□□□□□ -0.98
TNFRSF11B-202ENST00000517352 ATP2B2Q01814 1243 aa8.96□□□□□ -0.98
TNFRSF11B-202ENST00000517352 MFSD14CQ5VZR4 134 aa8.96□□□□□ -0.98
TNFRSF11B-202ENST00000517352 ERC1Q8IUD2 1116 aa8.96□□□□□ -0.98
TNFRSF11B-202ENST00000517352 TRMT2AQ8IZ69 625 aaKnown RBP8.96□□□□□ -0.98
TNFRSF11B-202ENST00000517352 TMEM57Q8N5G2 664 aa8.96□□□□□ -0.98
TNFRSF11B-202ENST00000517352 MAGEB6Q8N7X4 407 aa8.96□□□□□ -0.98
TNFRSF11B-202ENST00000517352 MIGA1Q8NAN2 632 aa8.96□□□□□ -0.98
TNFRSF11B-202ENST00000517352 DDRGK1Q96HY6 314 aa8.96□□□□□ -0.98
TNFRSF11B-202ENST00000517352 P2RX7Q99572 595 aaKnown RBP8.96□□□□□ -0.98
TNFRSF11B-202ENST00000517352 DBNDD2Q9BQY9 259 aa8.96□□□□□ -0.98
TNFRSF11B-202ENST00000517352 WDR18Q9BV38 432 aa8.96□□□□□ -0.98
TNFRSF11B-202ENST00000517352 CCDC8Q9H0W5 538 aaPredicted RBP8.96□□□□□ -0.98
TNFRSF11B-202ENST00000517352 C1orf115Q9H7X2 142 aa8.96□□□□□ -0.98
TNFRSF11B-202ENST00000517352 GPR108Q9NPR9 543 aa8.96□□□□□ -0.98
TNFRSF11B-202ENST00000517352 PAK6Q9NQU5 681 aaPredicted RBP8.96□□□□□ -0.98
TNFRSF11B-202ENST00000517352 ZMYND8Q9ULU4 1186 aaPredicted RBP8.96□□□□□ -0.98
TNFRSF11B-202ENST00000517352 OTOFQ9HC10 1997 aa8.95□□□□□ -0.98
TNFRSF11B-202ENST00000517352 A0A1B0GUL6 1792 aa8.95□□□□□ -0.98
TNFRSF11B-202ENST00000517352 USP17L15C9J2P7 530 aa8.95□□□□□ -0.98
TNFRSF11B-202ENST00000517352 USP17L13C9JLJ4 530 aa8.95□□□□□ -0.98
TNFRSF11B-202ENST00000517352 USP17L11C9JVI0 530 aa8.95□□□□□ -0.98
TNFRSF11B-202ENST00000517352 USP17L18D6R9N7 530 aa8.95□□□□□ -0.98
TNFRSF11B-202ENST00000517352 USP17L22D6RA61 530 aa8.95□□□□□ -0.98
TNFRSF11B-202ENST00000517352 USP17L17D6RBQ6 530 aa8.95□□□□□ -0.98
TNFRSF11B-202ENST00000517352 USP17L19D6RCP7 530 aa8.95□□□□□ -0.98
TNFRSF11B-202ENST00000517352 USP17L20D6RJB6 530 aa8.95□□□□□ -0.98
TNFRSF11B-202ENST00000517352 IGSF3O75054 1194 aa8.95□□□□□ -0.98
TNFRSF11B-202ENST00000517352 GH2P01242 217 aa8.95□□□□□ -0.98
TNFRSF11B-202ENST00000517352 ZAP70P43403 619 aa8.95□□□□□ -0.98
TNFRSF11B-202ENST00000517352 PPP4CP60510 307 aa8.95□□□□□ -0.98
TNFRSF11B-202ENST00000517352 ATP8B2P98198 1209 aa8.95□□□□□ -0.98
TNFRSF11B-202ENST00000517352 HNRNPUQ00839 825 aaKnown RBP eCLIP8.95□□□□□ -0.98
TNFRSF11B-202ENST00000517352 USP17L24Q0WX57 530 aa8.95□□□□□ -0.98
TNFRSF11B-202ENST00000517352 CERKLQ49MI3 558 aaPredicted RBP8.95□□□□□ -0.98
TNFRSF11B-202ENST00000517352 HSP90AB4PQ58FF6 505 aa8.95□□□□□ -0.98
TNFRSF11B-202ENST00000517352 SH3D19Q5HYK7 790 aa8.95□□□□□ -0.98
TNFRSF11B-202ENST00000517352 PLEKHH3Q7Z736 793 aa8.95□□□□□ -0.98
TNFRSF11B-202ENST00000517352 UBE2OQ9C0C9 1292 aaKnown RBP8.95□□□□□ -0.98
TNFRSF11B-202ENST00000517352 ZBTB21Q9ULJ3 1066 aa8.95□□□□□ -0.98
TNFRSF11B-202ENST00000517352 FLT1P17948 1338 aa8.95□□□□□ -0.98
TNFRSF11B-202ENST00000517352 APBB1O00213 710 aa8.94□□□□□ -0.98
TNFRSF11B-202ENST00000517352 RAD21O60216 631 aa8.94□□□□□ -0.98
TNFRSF11B-202ENST00000517352 CYP2E1P05181 493 aaPredicted RBP8.94□□□□□ -0.98
TNFRSF11B-202ENST00000517352 MS4A1P11836 297 aa8.94□□□□□ -0.98
TNFRSF11B-202ENST00000517352 SYN1P17600 705 aa8.94□□□□□ -0.98
TNFRSF11B-202ENST00000517352 HOXA7P31268 230 aaPredicted RBP8.94□□□□□ -0.98
TNFRSF11B-202ENST00000517352 ERVK-9P63128 1117 aa8.94□□□□□ -0.98
TNFRSF11B-202ENST00000517352 ERVK-24P63145 666 aa8.94□□□□□ -0.98
TNFRSF11B-202ENST00000517352 TTF1Q15361 905 aaPredicted RBP8.94□□□□□ -0.98
TNFRSF11B-202ENST00000517352 ABCB5Q2M3G0 1257 aa8.94□□□□□ -0.98
TNFRSF11B-202ENST00000517352 DPP9Q86TI2 863 aa8.94□□□□□ -0.98
TNFRSF11B-202ENST00000517352 AACSQ86V21 672 aa8.94□□□□□ -0.98
TNFRSF11B-202ENST00000517352 EDC3Q96F86 508 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms