RNA–Protein interactions for RNA: ENST00000517325.5

CHMP7-203, Transcript of charged multivesicular body protein 7, humanhuman

TSL 2

Gene CHMP7, Length 2,639 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-203ENST00000517325 USP17L12C9JPN9 530 aa19.25■□□□□ 0.67
CHMP7-203ENST00000517325 USP17L21D6R901 530 aa19.25■□□□□ 0.67
CHMP7-203ENST00000517325 NR5A1Q13285 461 aa19.25■□□□□ 0.67
CHMP7-203ENST00000517325 ZRSR1Q15695 479 aaKnown RBP19.25■□□□□ 0.67
CHMP7-203ENST00000517325 TIGD1Q96MW7 591 aa19.25■□□□□ 0.67
CHMP7-203ENST00000517325 GTPBP4Q9BZE4 634 aaKnown RBP19.25■□□□□ 0.67
CHMP7-203ENST00000517325 AATFQ9NY61 560 aaKnown RBP eCLIP19.25■□□□□ 0.67
CHMP7-203ENST00000517325 JAG2Q9Y219 1238 aa19.25■□□□□ 0.67
CHMP7-203ENST00000517325 PDS5AQ29RF7 1337 aaKnown RBP19.25■□□□□ 0.67
CHMP7-203ENST00000517325 MYH13Q9UKX3 1938 aa19.25■□□□□ 0.67
CHMP7-203ENST00000517325 FGRP09769 529 aa19.25■□□□□ 0.67
CHMP7-203ENST00000517325 CACTINQ8WUQ7 758 aaKnown RBP19.25■□□□□ 0.67
CHMP7-203ENST00000517325 SHISA4Q96DD7 197 aa19.25■□□□□ 0.67
CHMP7-203ENST00000517325 TNRC6CQ9HCJ0 1690 aaKnown RBP19.25■□□□□ 0.67
CHMP7-203ENST00000517325 NLRP12P59046 1061 aa19.24■□□□□ 0.67
CHMP7-203ENST00000517325 FOXP1Q9H334 677 aaPredicted RBP19.24■□□□□ 0.67
CHMP7-203ENST00000517325 CUTAO60888 179 aa19.24■□□□□ 0.67
CHMP7-203ENST00000517325 RBM6P78332 1123 aaKnown RBP19.24■□□□□ 0.67
CHMP7-203ENST00000517325 OXER1Q8TDS5 423 aa19.24■□□□□ 0.67
CHMP7-203ENST00000517325 BPIFA3Q9BQP9 254 aa19.24■□□□□ 0.67
CHMP7-203ENST00000517325 NAA30Q147X3 362 aaPredicted RBP19.23■□□□□ 0.67
CHMP7-203ENST00000517325 IFIT1BQ5T764 474 aaKnown RBP19.23■□□□□ 0.67
CHMP7-203ENST00000517325 DCP1AQ9NPI6 582 aaPredicted RBP19.23■□□□□ 0.67
CHMP7-203ENST00000517325 IRS2Q9Y4H2 1338 aa19.23■□□□□ 0.67
CHMP7-203ENST00000517325 RNF26Q9BY78 433 aaPredicted RBP19.23■□□□□ 0.67
CHMP7-203ENST00000517325 FUT2Q10981 343 aa19.22■□□□□ 0.67
CHMP7-203ENST00000517325 ISM2Q6H9L7 571 aa19.22■□□□□ 0.67
CHMP7-203ENST00000517325 KRI1Q8N9T8 703 aaKnown RBP19.22■□□□□ 0.67
CHMP7-203ENST00000517325 ANKRD7Q92527 254 aa19.22■□□□□ 0.67
CHMP7-203ENST00000517325 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.22■□□□□ 0.67
CHMP7-203ENST00000517325 TAF1LQ8IZX4 1826 aa19.22■□□□□ 0.67
CHMP7-203ENST00000517325 GRIN1Q05586 938 aa19.22■□□□□ 0.67
CHMP7-203ENST00000517325 ARID5BQ14865 1188 aa19.22■□□□□ 0.67
CHMP7-203ENST00000517325 PKN1Q16512 942 aa19.22■□□□□ 0.67
CHMP7-203ENST00000517325 SPECC1Q5M775 1068 aa19.22■□□□□ 0.67
CHMP7-203ENST00000517325 IQCA1Q86XH1 822 aa19.22■□□□□ 0.67
CHMP7-203ENST00000517325 TUBE1Q9UJT0 475 aa19.22■□□□□ 0.67
CHMP7-203ENST00000517325 NPHP1O15259 732 aa19.21■□□□□ 0.67
CHMP7-203ENST00000517325 PLEKHA8P1O95397 391 aa19.21■□□□□ 0.67
CHMP7-203ENST00000517325 PCP11498 1178 aaKnown RBP19.21■□□□□ 0.67
CHMP7-203ENST00000517325 PNOCQ13519 176 aa19.21■□□□□ 0.67
CHMP7-203ENST00000517325 PPP2R5BQ15173 497 aa19.21■□□□□ 0.67
CHMP7-203ENST00000517325 LONRF3Q496Y0 759 aa19.21■□□□□ 0.67
CHMP7-203ENST00000517325 RILPL1Q5EBL4 403 aa19.21■□□□□ 0.67
CHMP7-203ENST00000517325 CRNKL1Q9BZJ0 848 aaKnown RBP19.21■□□□□ 0.67
CHMP7-203ENST00000517325 KCNH3Q9ULD8 1083 aa19.21■□□□□ 0.67
CHMP7-203ENST00000517325 PCDHB6Q9Y5E3 794 aa19.21■□□□□ 0.67
CHMP7-203ENST00000517325 hCG_1642624A0A1W2PR95 340 aa19.21■□□□□ 0.67
CHMP7-203ENST00000517325 CYP2D6P10635 497 aa19.21■□□□□ 0.67
CHMP7-203ENST00000517325 TROAPQ12815 778 aa19.21■□□□□ 0.67
CHMP7-203ENST00000517325 CATIPQ7Z7H3 387 aa19.21■□□□□ 0.67
CHMP7-203ENST00000517325 METTL16Q86W50 562 aaKnown RBP19.21■□□□□ 0.67
CHMP7-203ENST00000517325 LY75O60449 1722 aa19.21■□□□□ 0.67
CHMP7-203ENST00000517325 NMT2O60551 498 aa19.21■□□□□ 0.66
CHMP7-203ENST00000517325 RFC4P35249 363 aa19.21■□□□□ 0.66
CHMP7-203ENST00000517325 NCAPHQ15003 741 aa19.21■□□□□ 0.66
CHMP7-203ENST00000517325 VPS54Q9P1Q0 977 aa19.21■□□□□ 0.66
CHMP7-203ENST00000517325 FBXO2Q9UK22 296 aaPredicted RBP19.21■□□□□ 0.66
CHMP7-203ENST00000517325 MYH6P13533 1939 aa19.2■□□□□ 0.66
CHMP7-203ENST00000517325 MAST2Q6P0Q8 1798 aa19.2■□□□□ 0.66
CHMP7-203ENST00000517325 DLEC1Q9Y238 1755 aa19.2■□□□□ 0.66
CHMP7-203ENST00000517325 KIF20AO95235 890 aa19.2■□□□□ 0.66
CHMP7-203ENST00000517325 AKAP17AQ02040 695 aaKnown RBP19.2■□□□□ 0.66
CHMP7-203ENST00000517325 KRBA2Q6ZNG9 492 aa19.2■□□□□ 0.66
CHMP7-203ENST00000517325 LRRC8AQ8IWT6 810 aa19.2■□□□□ 0.66
CHMP7-203ENST00000517325 C16orf45Q96MC5 204 aaPredicted RBP19.2■□□□□ 0.66
CHMP7-203ENST00000517325 ATP8A2Q9NTI2 1148 aa19.2■□□□□ 0.66
CHMP7-203ENST00000517325 ORC4O43929 436 aa19.19■□□□□ 0.66
CHMP7-203ENST00000517325 PTPREP23469 700 aa19.19■□□□□ 0.66
CHMP7-203ENST00000517325 NFIXQ14938 502 aa19.19■□□□□ 0.66
CHMP7-203ENST00000517325 FAM47AQ5JRC9 791 aa19.19■□□□□ 0.66
CHMP7-203ENST00000517325 FILIP1Q7Z7B0 1213 aa19.19■□□□□ 0.66
CHMP7-203ENST00000517325 CABP5Q9NP86 173 aa19.19■□□□□ 0.66
CHMP7-203ENST00000517325 FAM205CA6NFA0 338 aa19.19■□□□□ 0.66
CHMP7-203ENST00000517325 CTIFO43310 598 aaKnown RBP19.19■□□□□ 0.66
CHMP7-203ENST00000517325 ATP2B1P20020 1258 aa19.19■□□□□ 0.66
CHMP7-203ENST00000517325 NCBP1Q09161 790 aaKnown RBP19.19■□□□□ 0.66
CHMP7-203ENST00000517325 TRAPPC3LQ5T215 181 aa19.19■□□□□ 0.66
CHMP7-203ENST00000517325 FAM196AQ6ZSG2 479 aa19.19■□□□□ 0.66
CHMP7-203ENST00000517325 FOXP4Q8IVH2 680 aaPredicted RBP19.19■□□□□ 0.66
CHMP7-203ENST00000517325 CNNM3Q8NE01 707 aa19.19■□□□□ 0.66
CHMP7-203ENST00000517325 V9GY48 417 aaPredicted RBP19.19■□□□□ 0.66
CHMP7-203ENST00000517325 LAMB1P07942 1786 aa19.19■□□□□ 0.66
CHMP7-203ENST00000517325 PRPF3O43395 683 aaKnown RBP19.18■□□□□ 0.66
CHMP7-203ENST00000517325 RBM28Q9NW13 759 aaKnown RBP19.18■□□□□ 0.66
CHMP7-203ENST00000517325 ANKIB1Q9P2G1 1089 aa19.18■□□□□ 0.66
CHMP7-203ENST00000517325 KIAA1551Q9HCM1 1747 aa19.18■□□□□ 0.66
CHMP7-203ENST00000517325 FOXN1O15353 648 aa19.18■□□□□ 0.66
CHMP7-203ENST00000517325 EARS2Q5JPH6 523 aaKnown RBP19.18■□□□□ 0.66
CHMP7-203ENST00000517325 DZIP1Q86YF9 867 aaKnown RBP19.18■□□□□ 0.66
CHMP7-203ENST00000517325 PHF20Q9BVI0 1012 aa19.18■□□□□ 0.66
CHMP7-203ENST00000517325 DDAH1O94760 285 aa19.17■□□□□ 0.66
CHMP7-203ENST00000517325 GRAPQ13588 217 aa19.17■□□□□ 0.66
CHMP7-203ENST00000517325 SLC4A8Q2Y0W8 1093 aa19.17■□□□□ 0.66
CHMP7-203ENST00000517325 TMTC3Q6ZXV5 915 aa19.17■□□□□ 0.66
CHMP7-203ENST00000517325 GRAPLQ8TC17 118 aaPredicted RBP19.17■□□□□ 0.66
CHMP7-203ENST00000517325 XPO4Q9C0E2 1151 aaKnown RBP19.17■□□□□ 0.66
CHMP7-203ENST00000517325 ARPP21Q9UBL0 812 aaPredicted RBP19.17■□□□□ 0.66
CHMP7-203ENST00000517325 SBF2Q86WG5 1849 aa19.17■□□□□ 0.66
CHMP7-203ENST00000517325 CCDC88AQ3V6T2 1871 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms