RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 SSH1Q8WYL5 1049 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 GTPBP3Q969Y2 492 aaKnown RBP2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 KLRG1Q96E93 195 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 CITED4Q96RK1 184 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 BCL2L13Q9BXK5 485 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 API5Q9BZZ5 524 aaKnown RBP2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 CRISPLD1Q9H336 500 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 SMC4Q9NTJ3 1288 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 STK32BQ9NY57 414 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 CHPF2Q9P2E5 772 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 NARFQ9UHQ1 456 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 PRR12Q9ULL5 1215 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 PHF24Q9UPV7 400 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 KCNH4Q9UQ05 1017 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 ZNF652Q9Y2D9 606 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 LAS1LQ9Y4W2 734 aaKnown RBP2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 N4BP2Q86UW6 1770 aaPredicted RBP2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 CASZ1Q86V15 1759 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 C4AP0C0L4 1744 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 COL24A1Q17RW2 1714 aa2.78□□□□□ -1.96
SCARNA16.3-201ENST00000516595 TUBGCP6Q96RT7 1819 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 ADCY9O60503 1353 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 SENP3-EIF4A1A0A087X0R7 540 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 A6NHS1 94 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 POTECB2RU33 542 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 GPR25O00155 361 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 IPO8O15397 1037 aaKnown RBP2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 BNIP3LO60238 219 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 FZD6O60353 706 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 PPFIA3O75145 1194 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 ALDH1L1O75891 902 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 SASH3O75995 380 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 CAMTA2O94983 1202 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 PDGFAP04085 211 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 A1BGP04217 495 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 GYS1P13807 737 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 EIF2S2P20042 333 aaKnown RBP2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 TARSP26639 723 aaKnown RBP2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 INPP5BP32019 993 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 EHHADHQ08426 723 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 TBC1D8BQ0IIM8 1120 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 SFSWAPQ12872 951 aaKnown RBP2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 PDE3AQ14432 1141 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 ECM1Q16610 540 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 PROSER3Q2NL68 480 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 EAPPQ56P03 285 aaPredicted RBP2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 TRAPPC3LQ5T215 181 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 IER5Q5VY09 327 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 KSR2Q6VAB6 950 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 ATF7IPQ6VMQ6 1270 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 KIF6Q6ZMV9 814 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 COPS6Q7L5N1 327 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 TMC7Q7Z402 723 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 AMIGO3Q86WK7 504 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 NLGN1Q8N2Q7 840 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 RGS22Q8NE09 1264 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 LINS1Q8NG48 757 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 DNAAF4Q8WXU2 420 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 ABHD17AQ96GS6 310 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 GMCL1Q96IK5 515 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 DMRTB1Q96MA1 342 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 YTHDC1Q96MU7 727 aaKnown RBP2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 ASB16Q96NS5 453 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 ISCA1Q9BUE6 129 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 METTL22Q9BUU2 404 aaPredicted RBP2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 MTFR1LQ9H019 292 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 TFCP2L1Q9NZI6 479 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 MARK1Q9P0L2 795 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 DMGDHQ9UI17 866 aaKnown RBP2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 RCAN3Q9UKA8 241 aa2.77□□□□□ -1.97
SCARNA16.3-201ENST00000516595 C10orf71Q711Q0 1435 aa2.76□□□□□ -1.97
SCARNA16.3-201ENST00000516595 NRXN2Q9P2S2 1712 aa2.76□□□□□ -1.97
SCARNA16.3-201ENST00000516595 CARMIL3Q8ND23 1372 aa2.76□□□□□ -1.97
SCARNA16.3-201ENST00000516595 LRP5O75197 1615 aa2.76□□□□□ -1.97
SCARNA16.3-201ENST00000516595 UTYO14607 1347 aa2.76□□□□□ -1.97
SCARNA16.3-201ENST00000516595 UBN2Q6ZU65 1347 aa2.76□□□□□ -1.97
SCARNA16.3-201ENST00000516595 CDHR2Q9BYE9 1310 aa2.76□□□□□ -1.97
SCARNA16.3-201ENST00000516595 PI4KAP2A4QPH2 592 aa2.76□□□□□ -1.97
SCARNA16.3-201ENST00000516595 ELL2O00472 640 aaPredicted RBP2.76□□□□□ -1.97
SCARNA16.3-201ENST00000516595 BCAR3O75815 825 aa2.76□□□□□ -1.97
SCARNA16.3-201ENST00000516595 NTSR2O95665 410 aa2.76□□□□□ -1.97
SCARNA16.3-201ENST00000516595 CENPBP07199 599 aaPredicted RBP2.76□□□□□ -1.97
SCARNA16.3-201ENST00000516595 RARAP10276 462 aa2.76□□□□□ -1.97
SCARNA16.3-201ENST00000516595 MAPTP10636 758 aaKnown RBP2.76□□□□□ -1.97
SCARNA16.3-201ENST00000516595 TRIM27P14373 513 aa2.76□□□□□ -1.97
SCARNA16.3-201ENST00000516595 HSP90B1P14625 803 aaKnown RBP2.76□□□□□ -1.97
SCARNA16.3-201ENST00000516595 MYL6BP14649 208 aa2.76□□□□□ -1.97
SCARNA16.3-201ENST00000516595 CD33P20138 364 aa2.76□□□□□ -1.97
SCARNA16.3-201ENST00000516595 CANXP27824 592 aaKnown RBP2.76□□□□□ -1.97
SCARNA16.3-201ENST00000516595 TM4SF1P30408 202 aa2.76□□□□□ -1.97
SCARNA16.3-201ENST00000516595 RFC4P35249 363 aa2.76□□□□□ -1.97
SCARNA16.3-201ENST00000516595 CCT4P50991 539 aaKnown RBP2.76□□□□□ -1.97
SCARNA16.3-201ENST00000516595 RRP1P56182 461 aaKnown RBP2.76□□□□□ -1.97
SCARNA16.3-201ENST00000516595 KCNQ4P56696 695 aa2.76□□□□□ -1.97
SCARNA16.3-201ENST00000516595 ATP2B2Q01814 1243 aa2.76□□□□□ -1.97
SCARNA16.3-201ENST00000516595 TNP2Q05952 138 aa2.76□□□□□ -1.97
SCARNA16.3-201ENST00000516595 NEXNQ0ZGT2 675 aa2.76□□□□□ -1.97
SCARNA16.3-201ENST00000516595 TCIRG1Q13488 830 aa2.76□□□□□ -1.97
SCARNA16.3-201ENST00000516595 CCINQ13939 588 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms