RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 ANKRD33BA6NCL7 494 aa4.81□□□□□ -1.64
SCARNA16.2-201ENST00000516520 GRK4P32298 578 aa4.81□□□□□ -1.64
SCARNA16.2-201ENST00000516520 KIR3DL1P43629 444 aa4.81□□□□□ -1.64
SCARNA16.2-201ENST00000516520 JAG1P78504 1218 aa4.81□□□□□ -1.64
SCARNA16.2-201ENST00000516520 PDE4BQ07343 736 aa4.81□□□□□ -1.64
SCARNA16.2-201ENST00000516520 SEPT6Q14141 434 aa4.81□□□□□ -1.64
SCARNA16.2-201ENST00000516520 PKN1Q16512 942 aa4.81□□□□□ -1.64
SCARNA16.2-201ENST00000516520 NKG7Q16617 165 aa4.81□□□□□ -1.64
SCARNA16.2-201ENST00000516520 PRAMEF13Q5VWM6 474 aa4.81□□□□□ -1.64
SCARNA16.2-201ENST00000516520 LETMD1Q6P1Q0 360 aa4.81□□□□□ -1.64
SCARNA16.2-201ENST00000516520 THAP5Q7Z6K1 395 aa4.81□□□□□ -1.64
SCARNA16.2-201ENST00000516520 ZSWIM9Q86XI8 627 aa4.81□□□□□ -1.64
SCARNA16.2-201ENST00000516520 NPAS4Q8IUM7 802 aa4.81□□□□□ -1.64
SCARNA16.2-201ENST00000516520 CCDC120Q96HB5 630 aa4.81□□□□□ -1.64
SCARNA16.2-201ENST00000516520 CAPN6Q9Y6Q1 641 aa4.81□□□□□ -1.64
SCARNA16.2-201ENST00000516520 ETV3P41162 512 aa4.8□□□□□ -1.64
SCARNA16.2-201ENST00000516520 AFMP43652 599 aa4.8□□□□□ -1.64
SCARNA16.2-201ENST00000516520 ST13P50502 369 aaKnown RBP4.8□□□□□ -1.64
SCARNA16.2-201ENST00000516520 KCNMB1Q16558 191 aa4.8□□□□□ -1.64
SCARNA16.2-201ENST00000516520 MRPL41Q8IXM3 137 aaKnown RBP4.8□□□□□ -1.64
SCARNA16.2-201ENST00000516520 HSPA12BQ96MM6 686 aa4.8□□□□□ -1.64
SCARNA16.2-201ENST00000516520 SLC38A3Q99624 504 aa4.8□□□□□ -1.64
SCARNA16.2-201ENST00000516520 NOC4LQ9BVI4 516 aaKnown RBP4.8□□□□□ -1.64
SCARNA16.2-201ENST00000516520 CARS2Q9HA77 564 aaKnown RBP4.8□□□□□ -1.64
SCARNA16.2-201ENST00000516520 PRDM7Q9NQW5 492 aa4.8□□□□□ -1.64
SCARNA16.2-201ENST00000516520 SEMA3GQ9NS98 782 aa4.8□□□□□ -1.64
SCARNA16.2-201ENST00000516520 CTNND2Q9UQB3 1225 aa4.8□□□□□ -1.64
SCARNA16.2-201ENST00000516520 PCDHB5Q9Y5E4 795 aa4.8□□□□□ -1.64
SCARNA16.2-201ENST00000516520 H3BS24 57 aa4.79□□□□□ -1.64
SCARNA16.2-201ENST00000516520 GFRA2O00451 464 aa4.79□□□□□ -1.64
SCARNA16.2-201ENST00000516520 PGRP06401 933 aa4.79□□□□□ -1.64
SCARNA16.2-201ENST00000516520 ITGAEP38570 1179 aa4.79□□□□□ -1.64
SCARNA16.2-201ENST00000516520 RPL6Q02878 288 aaKnown RBP4.79□□□□□ -1.64
SCARNA16.2-201ENST00000516520 PSMD2Q13200 908 aa4.79□□□□□ -1.64
SCARNA16.2-201ENST00000516520 MAP3K11Q16584 847 aa4.79□□□□□ -1.64
SCARNA16.2-201ENST00000516520 TSNAXIP1Q2TAA8 658 aa4.79□□□□□ -1.64
SCARNA16.2-201ENST00000516520 ZNF648Q5T619 568 aaPredicted RBP4.79□□□□□ -1.64
SCARNA16.2-201ENST00000516520 CDKAL1Q5VV42 579 aa4.79□□□□□ -1.64
SCARNA16.2-201ENST00000516520 SLC6A19Q695T7 634 aa4.79□□□□□ -1.64
SCARNA16.2-201ENST00000516520 CCDC84Q86UT8 332 aaPredicted RBP4.79□□□□□ -1.64
SCARNA16.2-201ENST00000516520 KSR1Q8IVT5 923 aa4.79□□□□□ -1.64
SCARNA16.2-201ENST00000516520 PIWIL2Q8TC59 973 aaKnown RBP4.79□□□□□ -1.64
SCARNA16.2-201ENST00000516520 ADAM30Q9UKF2 790 aa4.79□□□□□ -1.64
SCARNA16.2-201ENST00000516520 LRRC10BA6NIK2 292 aa4.78□□□□□ -1.64
SCARNA16.2-201ENST00000516520 PRR33A8MZF0 331 aa4.78□□□□□ -1.64
SCARNA16.2-201ENST00000516520 CBX7O95931 251 aa4.78□□□□□ -1.64
SCARNA16.2-201ENST00000516520 GDNFP39905 211 aa4.78□□□□□ -1.64
SCARNA16.2-201ENST00000516520 CDK8P49336 464 aa4.78□□□□□ -1.64
SCARNA16.2-201ENST00000516520 DAB2P98082 770 aa4.78□□□□□ -1.64
SCARNA16.2-201ENST00000516520 XPCQ01831 940 aaPredicted RBP4.78□□□□□ -1.64
SCARNA16.2-201ENST00000516520 TAF1CQ15572 869 aaPredicted RBP4.78□□□□□ -1.64
SCARNA16.2-201ENST00000516520 BHLHE22Q8NFJ8 381 aaPredicted RBP4.78□□□□□ -1.64
SCARNA16.2-201ENST00000516520 XAGE3Q8WTP9 111 aa4.78□□□□□ -1.64
SCARNA16.2-201ENST00000516520 TMEM87BQ96K49 555 aa4.78□□□□□ -1.64
SCARNA16.2-201ENST00000516520 FAM84AQ96KN4 292 aa4.78□□□□□ -1.64
SCARNA16.2-201ENST00000516520 ATP13A1Q9HD20 1204 aa4.78□□□□□ -1.64
SCARNA16.2-201ENST00000516520 TJP2Q9UDY2 1190 aa4.78□□□□□ -1.64
SCARNA16.2-201ENST00000516520 PARP2Q9UGN5 583 aa4.78□□□□□ -1.64
SCARNA16.2-201ENST00000516520 ST14Q9Y5Y6 855 aa4.78□□□□□ -1.64
SCARNA16.2-201ENST00000516520 ARID1BQ8NFD5 2236 aaPredicted RBP4.78□□□□□ -1.64
SCARNA16.2-201ENST00000516520 TFE3P19532 575 aaPredicted RBP4.77□□□□□ -1.65
SCARNA16.2-201ENST00000516520 MEI1Q5TIA1 1274 aa4.77□□□□□ -1.65
SCARNA16.2-201ENST00000516520 TMC4Q7Z404 712 aa4.77□□□□□ -1.65
SCARNA16.2-201ENST00000516520 KIRREL1Q96J84 757 aa4.77□□□□□ -1.65
SCARNA16.2-201ENST00000516520 CNTNAP4Q9C0A0 1308 aa4.76□□□□□ -1.65
SCARNA16.2-201ENST00000516520 KRTAP4-8A0A0G2JLE6 195 aa4.76□□□□□ -1.65
SCARNA16.2-201ENST00000516520 DBX1A6NMT0 343 aa4.76□□□□□ -1.65
SCARNA16.2-201ENST00000516520 BPNT1O95861 308 aa4.76□□□□□ -1.65
SCARNA16.2-201ENST00000516520 GLI1P08151 1106 aa4.76□□□□□ -1.65
SCARNA16.2-201ENST00000516520 PDIA4P13667 645 aaKnown RBP4.76□□□□□ -1.65
SCARNA16.2-201ENST00000516520 TMPRSS7Q7RTY8 843 aa4.76□□□□□ -1.65
SCARNA16.2-201ENST00000516520 CDH24Q86UP0 819 aa4.76□□□□□ -1.65
SCARNA16.2-201ENST00000516520 AEBP1Q8IUX7 1158 aa4.76□□□□□ -1.65
SCARNA16.2-201ENST00000516520 MCATQ8IVS2 390 aaKnown RBP4.76□□□□□ -1.65
SCARNA16.2-201ENST00000516520 RIN3Q8TB24 985 aa4.76□□□□□ -1.65
SCARNA16.2-201ENST00000516520 UBE2FQ969M7 185 aa4.76□□□□□ -1.65
SCARNA16.2-201ENST00000516520 CRELD1Q96HD1 420 aa4.76□□□□□ -1.65
SCARNA16.2-201ENST00000516520 ALPK1Q96QP1 1244 aa4.76□□□□□ -1.65
SCARNA16.2-201ENST00000516520 PPP1R16BQ96T49 567 aa4.76□□□□□ -1.65
SCARNA16.2-201ENST00000516520 TRIT1Q9H3H1 467 aaKnown RBP4.76□□□□□ -1.65
SCARNA16.2-201ENST00000516520 USP31Q70CQ4 1352 aa4.76□□□□□ -1.65
SCARNA16.2-201ENST00000516520 ZNF503-AS2A6NEH8 195 aa4.75□□□□□ -1.65
SCARNA16.2-201ENST00000516520 RAC2P15153 192 aa4.75□□□□□ -1.65
SCARNA16.2-201ENST00000516520 ERCC3P19447 782 aa4.75□□□□□ -1.65
SCARNA16.2-201ENST00000516520 TNK2Q07912 1038 aa4.75□□□□□ -1.65
SCARNA16.2-201ENST00000516520 MLANAQ16655 118 aa4.75□□□□□ -1.65
SCARNA16.2-201ENST00000516520 DNAJC14Q6Y2X3 702 aaPredicted RBP4.75□□□□□ -1.65
SCARNA16.2-201ENST00000516520 PHC3Q8NDX5 983 aa4.75□□□□□ -1.65
SCARNA16.2-201ENST00000516520 JARID2Q92833 1246 aaPredicted RBP4.75□□□□□ -1.65
SCARNA16.2-201ENST00000516520 DPH2Q9BQC3 489 aaPredicted RBP4.75□□□□□ -1.65
SCARNA16.2-201ENST00000516520 RNF19AQ9NV58 838 aa4.75□□□□□ -1.65
SCARNA16.2-201ENST00000516520 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.75□□□□□ -1.65
SCARNA16.2-201ENST00000516520 ZSWIM5Q9P217 1185 aa4.75□□□□□ -1.65
SCARNA16.2-201ENST00000516520 PLCG1P19174 1290 aa4.74□□□□□ -1.65
SCARNA16.2-201ENST00000516520 YARSP54577 528 aaKnown RBP4.74□□□□□ -1.65
SCARNA16.2-201ENST00000516520 LMNB2Q03252 620 aa4.74□□□□□ -1.65
SCARNA16.2-201ENST00000516520 MESP2Q0VG99 397 aa4.74□□□□□ -1.65
SCARNA16.2-201ENST00000516520 PWP1Q13610 501 aa4.74□□□□□ -1.65
SCARNA16.2-201ENST00000516520 ZNF124Q15973 351 aa4.74□□□□□ -1.65
SCARNA16.2-201ENST00000516520 TMEM67Q5HYA8 995 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms