RNA–Protein interactions for RNA: ENST00000515835.2

PDE4D-225, Transcript of phosphodiesterase 4D, humanhuman

TSL 4 BASIC

Gene PDE4D, Length 590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-225ENST00000515835 CCNB3Q8WWL7 1395 aa9.43□□□□□ -0.9
PDE4D-225ENST00000515835 F6X3S4 739 aa9.43□□□□□ -0.9
PDE4D-225ENST00000515835 PF4P02776 101 aa9.43□□□□□ -0.9
PDE4D-225ENST00000515835 USP11P51784 963 aa9.43□□□□□ -0.9
PDE4D-225ENST00000515835 ERVK-24P63145 666 aa9.43□□□□□ -0.9
PDE4D-225ENST00000515835 FAM20CQ8IXL6 584 aa9.43□□□□□ -0.9
PDE4D-225ENST00000515835 SIGLEC1Q9BZZ2 1709 aa9.42□□□□□ -0.9
PDE4D-225ENST00000515835 RIMS1Q86UR5 1692 aaKnown RBP9.42□□□□□ -0.9
PDE4D-225ENST00000515835 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.42□□□□□ -0.9
PDE4D-225ENST00000515835 MINDY4BA8MYZ0 360 aa9.42□□□□□ -0.9
PDE4D-225ENST00000515835 H2AFB1P0C5Y9 115 aa9.42□□□□□ -0.9
PDE4D-225ENST00000515835 H2AFB2P0C5Z0 115 aa9.42□□□□□ -0.9
PDE4D-225ENST00000515835 BMP3P12645 472 aa9.42□□□□□ -0.9
PDE4D-225ENST00000515835 METTL16Q86W50 562 aaKnown RBP9.42□□□□□ -0.9
PDE4D-225ENST00000515835 FANCD2OSQ96PS1 177 aa9.42□□□□□ -0.9
PDE4D-225ENST00000515835 YIPF2Q9BWQ6 316 aa9.42□□□□□ -0.9
PDE4D-225ENST00000515835 KCNQ5Q9NR82 932 aa9.42□□□□□ -0.9
PDE4D-225ENST00000515835 DISC1Q9NRI5 854 aa9.42□□□□□ -0.9
PDE4D-225ENST00000515835 SPAG9O60271 1321 aaKnown RBP9.41□□□□□ -0.9
PDE4D-225ENST00000515835 ASPAP45381 313 aa9.41□□□□□ -0.9
PDE4D-225ENST00000515835 HDLBPQ00341 1268 aaKnown RBP9.41□□□□□ -0.9
PDE4D-225ENST00000515835 PRR23CQ6ZRP0 262 aa9.41□□□□□ -0.9
PDE4D-225ENST00000515835 FAM105AQ9NUU6 356 aa9.41□□□□□ -0.9
PDE4D-225ENST00000515835 SNCAIPQ9Y6H5 919 aa9.41□□□□□ -0.9
PDE4D-225ENST00000515835 CNTLNQ9NXG0 1405 aa9.4□□□□□ -0.9
PDE4D-225ENST00000515835 MAP4P27816 1152 aaKnown RBP9.4□□□□□ -0.9
PDE4D-225ENST00000515835 EIF4A3P38919 411 aaKnown RBP9.4□□□□□ -0.9
PDE4D-225ENST00000515835 RSPO4Q2I0M5 234 aaPredicted RBP9.4□□□□□ -0.9
PDE4D-225ENST00000515835 SGO2Q562F6 1265 aa9.4□□□□□ -0.9
PDE4D-225ENST00000515835 NKAPLQ5M9Q1 402 aa9.4□□□□□ -0.9
PDE4D-225ENST00000515835 SNAP47Q5SQN1 464 aa9.4□□□□□ -0.9
PDE4D-225ENST00000515835 HDXQ7Z353 690 aa9.4□□□□□ -0.9
PDE4D-225ENST00000515835 USP48Q86UV5 1035 aa9.4□□□□□ -0.9
PDE4D-225ENST00000515835 ELMO3Q96BJ8 720 aa9.4□□□□□ -0.9
PDE4D-225ENST00000515835 RAXQ9Y2V3 346 aa9.4□□□□□ -0.9
PDE4D-225ENST00000515835 EHBP1L1Q8N3D4 1523 aa9.4□□□□□ -0.91
PDE4D-225ENST00000515835 ITSN2Q9NZM3 1697 aa9.39□□□□□ -0.91
PDE4D-225ENST00000515835 ABCA6Q8N139 1617 aa9.39□□□□□ -0.91
PDE4D-225ENST00000515835 SAMD9LQ8IVG5 1584 aa9.39□□□□□ -0.91
PDE4D-225ENST00000515835 GARTP22102 1010 aa9.39□□□□□ -0.91
PDE4D-225ENST00000515835 HNRNPMP52272 730 aaKnown RBP eCLIP9.39□□□□□ -0.918e-7■■■■□ 24
PDE4D-225ENST00000515835 RING1Q06587 406 aa9.39□□□□□ -0.91
PDE4D-225ENST00000515835 INPP5AQ14642 412 aa9.39□□□□□ -0.91
PDE4D-225ENST00000515835 CDPF1Q6NVV7 123 aa9.39□□□□□ -0.91
PDE4D-225ENST00000515835 LRFN4Q6PJG9 635 aa9.39□□□□□ -0.91
PDE4D-225ENST00000515835 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.39□□□□□ -0.91
PDE4D-225ENST00000515835 CLEC10AQ8IUN9 316 aa9.39□□□□□ -0.91
PDE4D-225ENST00000515835 GOLM1Q8NBJ4 401 aa9.39□□□□□ -0.91
PDE4D-225ENST00000515835 RNF214Q8ND24 703 aa9.39□□□□□ -0.91
PDE4D-225ENST00000515835 GATAD2BQ8WXI9 593 aa9.39□□□□□ -0.91
PDE4D-225ENST00000515835 EZH1Q92800 747 aaPredicted RBP9.39□□□□□ -0.91
PDE4D-225ENST00000515835 JARID2Q92833 1246 aaPredicted RBP9.39□□□□□ -0.91
PDE4D-225ENST00000515835 PLPPR2Q96GM1 343 aa9.39□□□□□ -0.91
PDE4D-225ENST00000515835 ACSS3Q9H6R3 686 aa9.39□□□□□ -0.91
PDE4D-225ENST00000515835 PIDD1Q9HB75 910 aa9.39□□□□□ -0.91
PDE4D-225ENST00000515835 SYCP2Q9BX26 1530 aa9.39□□□□□ -0.91
PDE4D-225ENST00000515835 CDC42BPAQ5VT25 1732 aa9.39□□□□□ -0.91
PDE4D-225ENST00000515835 FER1L4A9Z1Z3 1794 aa9.38□□□□□ -0.91
PDE4D-225ENST00000515835 FAM221AA4D161 298 aa9.38□□□□□ -0.91
PDE4D-225ENST00000515835 DCDC2CA8MYV0 355 aa9.38□□□□□ -0.91
PDE4D-225ENST00000515835 CILPO75339 1184 aa9.38□□□□□ -0.91
PDE4D-225ENST00000515835 TCF3P15923 654 aa9.38□□□□□ -0.91
PDE4D-225ENST00000515835 RPL6Q02878 288 aaKnown RBP9.38□□□□□ -0.91
PDE4D-225ENST00000515835 FAM160A1Q05DH4 1040 aa9.38□□□□□ -0.91
PDE4D-225ENST00000515835 BNC2Q6ZN30 1099 aaPredicted RBP9.38□□□□□ -0.91
PDE4D-225ENST00000515835 BEND4Q6ZU67 534 aa9.38□□□□□ -0.91
PDE4D-225ENST00000515835 CYFIP1Q7L576 1253 aa9.38□□□□□ -0.91
PDE4D-225ENST00000515835 NT5DC4Q86YG4 428 aa9.38□□□□□ -0.91
PDE4D-225ENST00000515835 FBLIM1Q8WUP2 373 aa9.38□□□□□ -0.91
PDE4D-225ENST00000515835 FAM83CQ9BQN1 747 aa9.38□□□□□ -0.91
PDE4D-225ENST00000515835 KCNF1Q9H3M0 494 aa9.38□□□□□ -0.91
PDE4D-225ENST00000515835 STOML1Q9UBI4 398 aa9.38□□□□□ -0.91
PDE4D-225ENST00000515835 ADAMTS1Q9UHI8 967 aa9.38□□□□□ -0.91
PDE4D-225ENST00000515835 DDX41Q9UJV9 622 aaKnown RBP9.38□□□□□ -0.91
PDE4D-225ENST00000515835 SUPT16HQ9Y5B9 1047 aaKnown RBP9.38□□□□□ -0.91
PDE4D-225ENST00000515835 TACC3Q9Y6A5 838 aa9.38□□□□□ -0.91
PDE4D-225ENST00000515835 ROBO2Q9HCK4 1378 aa9.37□□□□□ -0.91
PDE4D-225ENST00000515835 GFRA2O00451 464 aa9.37□□□□□ -0.91
PDE4D-225ENST00000515835 FANCGO15287 622 aa9.37□□□□□ -0.91
PDE4D-225ENST00000515835 GREM1O60565 184 aa9.37□□□□□ -0.91
PDE4D-225ENST00000515835 F13A1P00488 732 aa9.37□□□□□ -0.91
PDE4D-225ENST00000515835 RAB6AP20340 208 aa9.37□□□□□ -0.91
PDE4D-225ENST00000515835 RXRBP28702 533 aa9.37□□□□□ -0.91
PDE4D-225ENST00000515835 HSPA2P54652 639 aa9.37□□□□□ -0.91
PDE4D-225ENST00000515835 TTLL4Q14679 1199 aa9.37□□□□□ -0.91
PDE4D-225ENST00000515835 ZNF394Q53GI3 561 aa9.37□□□□□ -0.91
PDE4D-225ENST00000515835 WIPI1Q5MNZ9 446 aaPredicted RBP9.37□□□□□ -0.91
PDE4D-225ENST00000515835 FBXL19Q6PCT2 694 aa9.37□□□□□ -0.91
PDE4D-225ENST00000515835 C12orf40Q86WS4 652 aa9.37□□□□□ -0.91
PDE4D-225ENST00000515835 ZNF654Q8IZM8 581 aa9.37□□□□□ -0.91
PDE4D-225ENST00000515835 FBXO41Q8TF61 875 aa9.37□□□□□ -0.91
PDE4D-225ENST00000515835 ZNF296Q8WUU4 475 aaPredicted RBP9.37□□□□□ -0.91
PDE4D-225ENST00000515835 CSADQ9Y600 493 aa9.37□□□□□ -0.91
PDE4D-225ENST00000515835 RTEL1-TNFRSF6BF6WH68 1400 aa9.37□□□□□ -0.91
PDE4D-225ENST00000515835 UHRF1BP1Q6BDS2 1440 aa9.37□□□□□ -0.91
PDE4D-225ENST00000515835 KIDINS220Q9ULH0 1771 aa9.37□□□□□ -0.91
PDE4D-225ENST00000515835 MBD5Q9P267 1494 aa9.36□□□□□ -0.91
PDE4D-225ENST00000515835 FAM95CA0A1B0GW59 222 aa9.36□□□□□ -0.91
PDE4D-225ENST00000515835 BPNT1O95861 308 aa9.36□□□□□ -0.91
PDE4D-225ENST00000515835 CEBPAP49715 358 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms