RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 LRIG2O94898 1065 aa5.86□□□□□ -1.47
HERC4-215ENST00000515753 GLI1P08151 1106 aa5.86□□□□□ -1.47
HERC4-215ENST00000515753 ATP2B2Q01814 1243 aa5.86□□□□□ -1.47
HERC4-215ENST00000515753 LRRC14Q15048 493 aa5.86□□□□□ -1.47
HERC4-215ENST00000515753 NKG7Q16617 165 aa5.86□□□□□ -1.47
HERC4-215ENST00000515753 PCNX4Q63HM2 1172 aa5.86□□□□□ -1.47
HERC4-215ENST00000515753 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.86□□□□□ -1.47
HERC4-215ENST00000515753 KCT2Q8NC54 265 aa5.86□□□□□ -1.47
HERC4-215ENST00000515753 ZNF507Q8TCN5 953 aa5.86□□□□□ -1.47
HERC4-215ENST00000515753 FRMD6Q96NE9 622 aa5.86□□□□□ -1.47
HERC4-215ENST00000515753 KCNK12Q9HB15 430 aa5.86□□□□□ -1.47
HERC4-215ENST00000515753 LMCD1Q9NZU5 365 aa5.86□□□□□ -1.47
HERC4-215ENST00000515753 WWC3Q9ULE0 1092 aa5.86□□□□□ -1.47
HERC4-215ENST00000515753 MAPK8IP1Q9UQF2 711 aa5.86□□□□□ -1.47
HERC4-215ENST00000515753 CBX7O95931 251 aa5.85□□□□□ -1.47
HERC4-215ENST00000515753 CDK8P49336 464 aa5.85□□□□□ -1.47
HERC4-215ENST00000515753 SLBPQ14493 270 aaKnown RBP eCLIP5.85□□□□□ -1.47
HERC4-215ENST00000515753 TMEM67Q5HYA8 995 aa5.85□□□□□ -1.47
HERC4-215ENST00000515753 XAGE3Q8WTP9 111 aa5.85□□□□□ -1.47
HERC4-215ENST00000515753 PLPPR2Q96GM1 343 aa5.85□□□□□ -1.47
HERC4-215ENST00000515753 DIRC2Q96SL1 478 aa5.85□□□□□ -1.47
HERC4-215ENST00000515753 ANKRD33BA6NCL7 494 aa5.84□□□□□ -1.47
HERC4-215ENST00000515753 KRTAP9-7A8MTY7 169 aa5.84□□□□□ -1.47
HERC4-215ENST00000515753 PRPF40AO75400 957 aaKnown RBP5.84□□□□□ -1.47
HERC4-215ENST00000515753 ZNF865P0CJ78 1059 aaPredicted RBP5.84□□□□□ -1.47
HERC4-215ENST00000515753 CCDC27Q2M243 656 aa5.84□□□□□ -1.47
HERC4-215ENST00000515753 SFRP5Q5T4F7 317 aa5.84□□□□□ -1.47
HERC4-215ENST00000515753 MFSD4AQ8N468 514 aa5.84□□□□□ -1.47
HERC4-215ENST00000515753 BHLHE22Q8NFJ8 381 aaPredicted RBP5.84□□□□□ -1.47
HERC4-215ENST00000515753 TOX2Q96NM4 488 aa5.84□□□□□ -1.47
HERC4-215ENST00000515753 GZF1Q9H116 711 aaPredicted RBP5.84□□□□□ -1.47
HERC4-215ENST00000515753 PPM1HQ9ULR3 514 aa5.84□□□□□ -1.47
HERC4-215ENST00000515753 CYP8B1Q9UNU6 501 aa5.84□□□□□ -1.47
HERC4-215ENST00000515753 TSPAN15O95858 294 aa5.83□□□□□ -1.48
HERC4-215ENST00000515753 C1QTNF9P0C862 333 aa5.83□□□□□ -1.48
HERC4-215ENST00000515753 ETF1P62495 437 aaKnown RBP5.83□□□□□ -1.48
HERC4-215ENST00000515753 LCNL1Q6ZST4 164 aa5.83□□□□□ -1.48
HERC4-215ENST00000515753 C1QL4Q86Z23 238 aa5.83□□□□□ -1.48
HERC4-215ENST00000515753 LRRC56Q8IYG6 542 aaPredicted RBP5.83□□□□□ -1.48
HERC4-215ENST00000515753 UBE2FQ969M7 185 aa5.83□□□□□ -1.48
HERC4-215ENST00000515753 ST14Q9Y5Y6 855 aa5.83□□□□□ -1.48
HERC4-215ENST00000515753 CAPN6Q9Y6Q1 641 aa5.83□□□□□ -1.48
HERC4-215ENST00000515753 KRT1P04264 644 aa5.82□□□□□ -1.48
HERC4-215ENST00000515753 LDHBP07195 334 aaKnown RBP5.82□□□□□ -1.48
HERC4-215ENST00000515753 GDNFP39905 211 aa5.82□□□□□ -1.48
HERC4-215ENST00000515753 WIPI1Q5MNZ9 446 aaPredicted RBP5.82□□□□□ -1.48
HERC4-215ENST00000515753 LETMD1Q6P1Q0 360 aa5.82□□□□□ -1.48
HERC4-215ENST00000515753 HDXQ7Z353 690 aa5.82□□□□□ -1.48
HERC4-215ENST00000515753 FBXO33Q7Z6M2 555 aa5.82□□□□□ -1.48
HERC4-215ENST00000515753 ANKLE2Q86XL3 938 aa5.82□□□□□ -1.48
HERC4-215ENST00000515753 PPP1R16BQ96T49 567 aa5.82□□□□□ -1.48
HERC4-215ENST00000515753 WNT10AQ9GZT5 417 aa5.82□□□□□ -1.48
HERC4-215ENST00000515753 NSUN3Q9H649 340 aaKnown RBP5.82□□□□□ -1.48
HERC4-215ENST00000515753 ZSWIM5Q9P217 1185 aa5.82□□□□□ -1.48
HERC4-215ENST00000515753 SPG7Q9UQ90 795 aa5.82□□□□□ -1.48
HERC4-215ENST00000515753 ZBTB7CA1YPR0 619 aa5.81□□□□□ -1.48
HERC4-215ENST00000515753 USP17L7P0C7H9 530 aa5.81□□□□□ -1.48
HERC4-215ENST00000515753 GNA15P30679 374 aa5.81□□□□□ -1.48
HERC4-215ENST00000515753 KRTAP19-4Q3LI73 84 aa5.81□□□□□ -1.48
HERC4-215ENST00000515753 EAPPQ56P03 285 aaPredicted RBP5.81□□□□□ -1.48
HERC4-215ENST00000515753 PRAMEF13Q5VWM6 474 aa5.81□□□□□ -1.48
HERC4-215ENST00000515753 CDH24Q86UP0 819 aa5.81□□□□□ -1.48
HERC4-215ENST00000515753 ZSCAN18Q8TBC5 510 aaPredicted RBP5.81□□□□□ -1.48
HERC4-215ENST00000515753 GAL3ST3Q96A11 431 aa5.81□□□□□ -1.48
HERC4-215ENST00000515753 C12orf49Q9H741 205 aa5.81□□□□□ -1.48
HERC4-215ENST00000515753 SLAMF8Q9P0V8 285 aa5.81□□□□□ -1.48
HERC4-215ENST00000515753 WASH4PA8MWX3 477 aa5.8□□□□□ -1.48
HERC4-215ENST00000515753 ZSCAN22P10073 491 aaPredicted RBP5.8□□□□□ -1.48
HERC4-215ENST00000515753 GRK4P32298 578 aa5.8□□□□□ -1.48
HERC4-215ENST00000515753 ERVFC1P60507 584 aa5.8□□□□□ -1.48
HERC4-215ENST00000515753 C22orf34Q6ZV56 151 aa5.8□□□□□ -1.48
HERC4-215ENST00000515753 HID1Q8IV36 788 aa5.8□□□□□ -1.48
HERC4-215ENST00000515753 MFSD2AQ8NA29 543 aa5.8□□□□□ -1.48
HERC4-215ENST00000515753 ALPK1Q96QP1 1244 aa5.8□□□□□ -1.48
HERC4-215ENST00000515753 KRTAP17-1Q9BYP8 105 aa5.8□□□□□ -1.48
HERC4-215ENST00000515753 FAM8A1Q9UBU6 413 aa5.8□□□□□ -1.48
HERC4-215ENST00000515753 TTF2Q9UNY4 1162 aaKnown RBP5.8□□□□□ -1.48
HERC4-215ENST00000515753 DNAJC25-GNG10A0A024R161 153 aa5.79□□□□□ -1.48
HERC4-215ENST00000515753 NFIBO00712 420 aa5.79□□□□□ -1.48
HERC4-215ENST00000515753 TNK2Q07912 1038 aa5.79□□□□□ -1.48
HERC4-215ENST00000515753 RALGPS1Q5JS13 557 aa5.79□□□□□ -1.48
HERC4-215ENST00000515753 SCARA3Q6AZY7 606 aa5.79□□□□□ -1.48
HERC4-215ENST00000515753 TTC6Q86TZ1 520 aa5.79□□□□□ -1.48
HERC4-215ENST00000515753 FBXO15Q8NCQ5 510 aaPredicted RBP5.79□□□□□ -1.48
HERC4-215ENST00000515753 DPH2Q9BQC3 489 aaPredicted RBP5.79□□□□□ -1.48
HERC4-215ENST00000515753 NPIPB6E9PJ23 425 aa5.78□□□□□ -1.48
HERC4-215ENST00000515753 CAP2P40123 477 aa5.78□□□□□ -1.48
HERC4-215ENST00000515753 HK2P52789 917 aa5.78□□□□□ -1.48
HERC4-215ENST00000515753 SEPT6Q14141 434 aa5.78□□□□□ -1.48
HERC4-215ENST00000515753 TTBK2Q6IQ55 1244 aa5.78□□□□□ -1.48
HERC4-215ENST00000515753 ABHD4Q8TB40 342 aa5.78□□□□□ -1.48
HERC4-215ENST00000515753 DCP1AQ9NPI6 582 aaPredicted RBP5.78□□□□□ -1.48
HERC4-215ENST00000515753 PCDHB5Q9Y5E4 795 aa5.78□□□□□ -1.48
HERC4-215ENST00000515753 SNCAIPQ9Y6H5 919 aa5.78□□□□□ -1.48
HERC4-215ENST00000515753 CST3P01034 146 aaPredicted RBP5.77□□□□□ -1.49
HERC4-215ENST00000515753 TMEM253P0C7T8 217 aa5.77□□□□□ -1.49
HERC4-215ENST00000515753 TMCO4Q5TGY1 634 aa5.77□□□□□ -1.49
HERC4-215ENST00000515753 SV2BQ7L1I2 683 aa5.77□□□□□ -1.49
HERC4-215ENST00000515753 THAP5Q7Z6K1 395 aa5.77□□□□□ -1.49
HERC4-215ENST00000515753 ESR1P03372 595 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms