RNA–Protein interactions for RNA: ENST00000515546.1

HMGCLL1-209, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 4

Gene HMGCLL1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-209ENST00000515546 PLCD1P51178 756 aa17.9■□□□□ 0.46
HMGCLL1-209ENST00000515546 SDR42E1Q8WUS8 393 aa17.9■□□□□ 0.46
HMGCLL1-209ENST00000515546 GCC1Q96CN9 775 aa17.9■□□□□ 0.46
HMGCLL1-209ENST00000515546 AS3MTQ9HBK9 375 aa17.9■□□□□ 0.46
HMGCLL1-209ENST00000515546 TAOK2Q9UL54 1235 aa17.9■□□□□ 0.46
HMGCLL1-209ENST00000515546 PTPN22Q9Y2R2 807 aa17.9■□□□□ 0.46
HMGCLL1-209ENST00000515546 ZSWIM8A7E2V4 1837 aa17.9■□□□□ 0.46
HMGCLL1-209ENST00000515546 BCRP11274 1271 aa17.89■□□□□ 0.45
HMGCLL1-209ENST00000515546 SHMT1P34896 483 aa17.89■□□□□ 0.45
HMGCLL1-209ENST00000515546 RGS19P49795 217 aa17.89■□□□□ 0.45
HMGCLL1-209ENST00000515546 TREML2Q5T2D2 321 aa17.89■□□□□ 0.45
HMGCLL1-209ENST00000515546 MCM9Q9NXL9 1143 aa17.89■□□□□ 0.45
HMGCLL1-209ENST00000515546 CPA4Q9UI42 421 aa17.89■□□□□ 0.45
HMGCLL1-209ENST00000515546 PRKAB2O43741 272 aa17.88■□□□□ 0.45
HMGCLL1-209ENST00000515546 GLRX3O76003 335 aaKnown RBP17.88■□□□□ 0.45
HMGCLL1-209ENST00000515546 MX1P20591 662 aa17.88■□□□□ 0.45
HMGCLL1-209ENST00000515546 HMGCS2P54868 508 aa17.88■□□□□ 0.45
HMGCLL1-209ENST00000515546 BACE1P56817 501 aa17.88■□□□□ 0.45
HMGCLL1-209ENST00000515546 EVX2Q03828 476 aa17.88■□□□□ 0.45
HMGCLL1-209ENST00000515546 ARHGEF6Q15052 776 aa17.88■□□□□ 0.45
HMGCLL1-209ENST00000515546 ARHGAP39Q9C0H5 1083 aa17.88■□□□□ 0.45
HMGCLL1-209ENST00000515546 PUS7LQ9H0K6 701 aaKnown RBP17.88■□□□□ 0.45
HMGCLL1-209ENST00000515546 ATP8A2Q9NTI2 1148 aa17.88■□□□□ 0.45
HMGCLL1-209ENST00000515546 ERC2O15083 957 aa17.87■□□□□ 0.45
HMGCLL1-209ENST00000515546 GNRH1P01148 92 aa17.87■□□□□ 0.45
HMGCLL1-209ENST00000515546 GH2P01242 217 aa17.87■□□□□ 0.45
HMGCLL1-209ENST00000515546 POLR3DP05423 398 aaPredicted RBP17.87■□□□□ 0.45
HMGCLL1-209ENST00000515546 MTMR2Q13614 643 aa17.87■□□□□ 0.45
HMGCLL1-209ENST00000515546 CENPFP49454 3210 aa17.87■□□□□ 0.45
HMGCLL1-209ENST00000515546 CENPBP07199 599 aaPredicted RBP17.86■□□□□ 0.45
HMGCLL1-209ENST00000515546 ZFYP08048 801 aaPredicted RBP17.86■□□□□ 0.45
HMGCLL1-209ENST00000515546 CYP2D6P10635 497 aa17.86■□□□□ 0.45
HMGCLL1-209ENST00000515546 CTGFP29279 349 aa17.86■□□□□ 0.45
HMGCLL1-209ENST00000515546 SMC5Q8IY18 1101 aa17.86■□□□□ 0.45
HMGCLL1-209ENST00000515546 EXOC6Q8TAG9 804 aa17.86■□□□□ 0.45
HMGCLL1-209ENST00000515546 APPBP2Q92624 585 aa17.86■□□□□ 0.45
HMGCLL1-209ENST00000515546 ARMC5Q96C12 935 aa17.86■□□□□ 0.45
HMGCLL1-209ENST00000515546 STAP2Q9UGK3 403 aa17.86■□□□□ 0.45
HMGCLL1-209ENST00000515546 PNMA3Q9UL41 463 aa17.86■□□□□ 0.45
HMGCLL1-209ENST00000515546 C19orf81C9J6K1 198 aa17.85■□□□□ 0.45
HMGCLL1-209ENST00000515546 RNF113AO15541 343 aaKnown RBP17.85■□□□□ 0.45
HMGCLL1-209ENST00000515546 KIF22Q14807 665 aa17.85■□□□□ 0.45
HMGCLL1-209ENST00000515546 ABCB5Q2M3G0 1257 aa17.85■□□□□ 0.45
HMGCLL1-209ENST00000515546 CERKLQ49MI3 558 aaPredicted RBP17.85■□□□□ 0.45
HMGCLL1-209ENST00000515546 ANKRD45Q5TZF3 282 aa17.85■□□□□ 0.45
HMGCLL1-209ENST00000515546 OSBP2Q969R2 916 aa17.85■□□□□ 0.45
HMGCLL1-209ENST00000515546 TRIM47Q96LD4 638 aa17.85■□□□□ 0.45
HMGCLL1-209ENST00000515546 STRBPQ96SI9 672 aaKnown RBP17.85■□□□□ 0.45
HMGCLL1-209ENST00000515546 USP17L10C9JJH3 530 aa17.84■□□□□ 0.45
HMGCLL1-209ENST00000515546 PRMT2P55345 433 aa17.84■□□□□ 0.45
HMGCLL1-209ENST00000515546 PABPC4Q13310 644 aaKnown RBP eCLIP17.84■□□□□ 0.45
HMGCLL1-209ENST00000515546 SMCR8Q8TEV9 937 aaPredicted RBP17.84■□□□□ 0.45
HMGCLL1-209ENST00000515546 SWAP70Q9UH65 585 aa17.84■□□□□ 0.45
HMGCLL1-209ENST00000515546 SLC4A4Q9Y6R1 1079 aa17.84■□□□□ 0.45
HMGCLL1-209ENST00000515546 BAZ2AQ9UIF9 1905 aaKnown RBP17.84■□□□□ 0.45
HMGCLL1-209ENST00000515546 HOXA7P31268 230 aaPredicted RBP17.83■□□□□ 0.44
HMGCLL1-209ENST00000515546 GUCY1A2P33402 732 aa17.83■□□□□ 0.44
HMGCLL1-209ENST00000515546 SOX10P56693 466 aa17.83■□□□□ 0.44
HMGCLL1-209ENST00000515546 C12orf60Q5U649 245 aa17.83■□□□□ 0.44
HMGCLL1-209ENST00000515546 SLC44A5Q8NCS7 719 aa17.83■□□□□ 0.44
HMGCLL1-209ENST00000515546 C12orf42Q96LP6 360 aa17.83■□□□□ 0.44
HMGCLL1-209ENST00000515546 ASCC2Q9H1I8 757 aaPredicted RBP17.83■□□□□ 0.44
HMGCLL1-209ENST00000515546 RWDD1Q9H446 243 aaPredicted RBP17.83■□□□□ 0.44
HMGCLL1-209ENST00000515546 TMOD4Q9NZQ9 345 aa17.83■□□□□ 0.44
HMGCLL1-209ENST00000515546 SUPT16HQ9Y5B9 1047 aaKnown RBP17.83■□□□□ 0.44
HMGCLL1-209ENST00000515546 PTCH2Q9Y6C5 1203 aa17.83■□□□□ 0.44
HMGCLL1-209ENST00000515546 ROBO3Q96MS0 1386 aa17.82■□□□□ 0.44
HMGCLL1-209ENST00000515546 RBBP6Q7Z6E9 1792 aaKnown RBP17.82■□□□□ 0.44
HMGCLL1-209ENST00000515546 PSMC4P43686 418 aa17.82■□□□□ 0.44
HMGCLL1-209ENST00000515546 FAM110CQ1W6H9 321 aa17.82■□□□□ 0.44
HMGCLL1-209ENST00000515546 LRRFIP1Q32MZ4 808 aaKnown RBP17.82■□□□□ 0.44
HMGCLL1-209ENST00000515546 GIMAP6Q6P9H5 292 aa17.82■□□□□ 0.44
HMGCLL1-209ENST00000515546 DDRGK1Q96HY6 314 aa17.82■□□□□ 0.44
HMGCLL1-209ENST00000515546 KIAA1683Q9H0B3 1180 aa17.82■□□□□ 0.44
HMGCLL1-209ENST00000515546 EMILIN3Q9NT22 766 aa17.82■□□□□ 0.44
HMGCLL1-209ENST00000515546 ARPP21Q9UBL0 812 aaPredicted RBP17.82■□□□□ 0.44
HMGCLL1-209ENST00000515546 ZBTB47Q9UFB7 747 aaPredicted RBP17.82■□□□□ 0.44
HMGCLL1-209ENST00000515546 TNRC18O15417 2968 aaPredicted RBP17.82■□□□□ 0.44
HMGCLL1-209ENST00000515546 CYP2D7A0A087X1C5 515 aa17.81■□□□□ 0.44
HMGCLL1-209ENST00000515546 GSG1L2A8MUP6 293 aa17.81■□□□□ 0.44
HMGCLL1-209ENST00000515546 USP17L12C9JPN9 530 aa17.81■□□□□ 0.44
HMGCLL1-209ENST00000515546 USP17L21D6R901 530 aa17.81■□□□□ 0.44
HMGCLL1-209ENST00000515546 SMIM22K7EJ46 135 aa17.81■□□□□ 0.44
HMGCLL1-209ENST00000515546 M0R2C6 588 aa17.81■□□□□ 0.44
HMGCLL1-209ENST00000515546 GPAA1O43292 621 aa17.81■□□□□ 0.44
HMGCLL1-209ENST00000515546 OSBPP22059 807 aa17.81■□□□□ 0.44
HMGCLL1-209ENST00000515546 GCLCP48506 637 aaPredicted RBP17.81■□□□□ 0.44
HMGCLL1-209ENST00000515546 PDE1AP54750 535 aa17.81■□□□□ 0.44
HMGCLL1-209ENST00000515546 FCGRTP55899 365 aa17.81■□□□□ 0.44
HMGCLL1-209ENST00000515546 RAB3GAP1Q15042 981 aa17.81■□□□□ 0.44
HMGCLL1-209ENST00000515546 CTR9Q6PD62 1173 aa17.81■□□□□ 0.44
HMGCLL1-209ENST00000515546 USP17L2Q6R6M4 530 aa17.81■□□□□ 0.44
HMGCLL1-209ENST00000515546 C16orf86Q6ZW13 317 aa17.81■□□□□ 0.44
HMGCLL1-209ENST00000515546 DYNLL2Q96FJ2 89 aa17.81■□□□□ 0.44
HMGCLL1-209ENST00000515546 CABP5Q9NP86 173 aa17.81■□□□□ 0.44
HMGCLL1-209ENST00000515546 SRRDQ9UH36 339 aa17.81■□□□□ 0.44
HMGCLL1-209ENST00000515546 BRCA2P51587 3418 aa17.81■□□□□ 0.44
HMGCLL1-209ENST00000515546 MGAMO43451 1857 aa17.8■□□□□ 0.44
HMGCLL1-209ENST00000515546 IGHDP01880 384 aa17.8■□□□□ 0.44
HMGCLL1-209ENST00000515546 SEPT2Q15019 361 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms