RNA–Protein interactions for RNA: ENST00000515533.1

CDC42SE2-212, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-212ENST00000515533 HDLBPQ00341 1268 aaKnown RBP11.14□□□□□ -0.63
CDC42SE2-212ENST00000515533 VGLL4Q14135 290 aa11.14□□□□□ -0.63
CDC42SE2-212ENST00000515533 TAF1CQ15572 869 aaPredicted RBP11.14□□□□□ -0.63
CDC42SE2-212ENST00000515533 CCL15Q16663 113 aa11.14□□□□□ -0.63
CDC42SE2-212ENST00000515533 MSS51Q4VC12 460 aa11.14□□□□□ -0.63
CDC42SE2-212ENST00000515533 LRRC24Q50LG9 513 aa11.14□□□□□ -0.63
CDC42SE2-212ENST00000515533 SMYD5Q6GMV2 418 aa11.14□□□□□ -0.63
CDC42SE2-212ENST00000515533 FBXO33Q7Z6M2 555 aa11.14□□□□□ -0.63
CDC42SE2-212ENST00000515533 TEPSINQ96N21 525 aa11.14□□□□□ -0.63
CDC42SE2-212ENST00000515533 PTPN22Q9Y2R2 807 aa11.14□□□□□ -0.63
CDC42SE2-212ENST00000515533 GPR37O15354 613 aa11.13□□□□□ -0.63
CDC42SE2-212ENST00000515533 WIPF1O43516 503 aa11.13□□□□□ -0.63
CDC42SE2-212ENST00000515533 GTF2A2P52657 109 aa11.13□□□□□ -0.63
CDC42SE2-212ENST00000515533 CACNB3P54284 484 aa11.13□□□□□ -0.63
CDC42SE2-212ENST00000515533 ARHGEF6Q15052 776 aa11.13□□□□□ -0.63
CDC42SE2-212ENST00000515533 RNF19BQ6ZMZ0 732 aa11.13□□□□□ -0.63
CDC42SE2-212ENST00000515533 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.13□□□□□ -0.63
CDC42SE2-212ENST00000515533 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.13□□□□□ -0.63
CDC42SE2-212ENST00000515533 HOOK2Q96ED9 719 aa11.13□□□□□ -0.63
CDC42SE2-212ENST00000515533 PTPN18Q99952 460 aa11.13□□□□□ -0.63
CDC42SE2-212ENST00000515533 ZFYVE28Q9HCC9 887 aa11.13□□□□□ -0.63
CDC42SE2-212ENST00000515533 PTPRFP10586 1907 aa11.12□□□□□ -0.63
CDC42SE2-212ENST00000515533 WNT7AO00755 349 aa11.12□□□□□ -0.63
CDC42SE2-212ENST00000515533 IFIT1P09914 478 aaKnown RBP11.12□□□□□ -0.63
CDC42SE2-212ENST00000515533 SMPD1P17405 629 aa11.12□□□□□ -0.63
CDC42SE2-212ENST00000515533 PUM3Q15397 648 aaKnown RBP11.12□□□□□ -0.63
CDC42SE2-212ENST00000515533 GRIK5Q16478 980 aa11.12□□□□□ -0.63
CDC42SE2-212ENST00000515533 ANKRD44Q8N8A2 993 aa11.12□□□□□ -0.63
CDC42SE2-212ENST00000515533 VGLL2Q8N8G2 317 aa11.12□□□□□ -0.63
CDC42SE2-212ENST00000515533 KLHDC4Q8TBB5 520 aa11.12□□□□□ -0.63
CDC42SE2-212ENST00000515533 BRI3BPQ8WY22 251 aa11.12□□□□□ -0.63
CDC42SE2-212ENST00000515533 WRNIP1Q96S55 665 aa11.12□□□□□ -0.63
CDC42SE2-212ENST00000515533 SUGT1Q9Y2Z0 365 aa11.12□□□□□ -0.63
CDC42SE2-212ENST00000515533 ZNF521Q96K83 1311 aa11.11□□□□□ -0.63
CDC42SE2-212ENST00000515533 KIF16BQ96L93 1317 aa11.11□□□□□ -0.63
CDC42SE2-212ENST00000515533 SPDYE5A6NIY4 337 aa11.11□□□□□ -0.63
CDC42SE2-212ENST00000515533 E9PSI1 815 aa11.11□□□□□ -0.63
CDC42SE2-212ENST00000515533 DCAF15Q66K64 600 aa11.11□□□□□ -0.63
CDC42SE2-212ENST00000515533 NBPF11Q86T75 865 aa11.11□□□□□ -0.63
CDC42SE2-212ENST00000515533 FAM83AQ86UY5 434 aa11.11□□□□□ -0.63
CDC42SE2-212ENST00000515533 SNIP1Q8TAD8 396 aaKnown RBP11.11□□□□□ -0.63
CDC42SE2-212ENST00000515533 GCC1Q96CN9 775 aa11.11□□□□□ -0.63
CDC42SE2-212ENST00000515533 ZDHHC15Q96MV8 337 aa11.11□□□□□ -0.63
CDC42SE2-212ENST00000515533 CETPP11597 493 aa11.1□□□□□ -0.63
CDC42SE2-212ENST00000515533 SLC5A1P13866 664 aa11.1□□□□□ -0.63
CDC42SE2-212ENST00000515533 TRIM32Q13049 653 aa11.1□□□□□ -0.63
CDC42SE2-212ENST00000515533 SLC9C1Q4G0N8 1177 aa11.1□□□□□ -0.63
CDC42SE2-212ENST00000515533 FKBP1CQ5VVH2 108 aa11.1□□□□□ -0.63
CDC42SE2-212ENST00000515533 HHIPL2Q6UWX4 724 aa11.1□□□□□ -0.63
CDC42SE2-212ENST00000515533 ERO1BQ86YB8 467 aa11.1□□□□□ -0.63
CDC42SE2-212ENST00000515533 FAM43AQ8N2R8 423 aa11.1□□□□□ -0.63
CDC42SE2-212ENST00000515533 WDR66Q8TBY9 1149 aa11.1□□□□□ -0.63
CDC42SE2-212ENST00000515533 SSH1Q8WYL5 1049 aa11.1□□□□□ -0.63
CDC42SE2-212ENST00000515533 ARMC5Q96C12 935 aa11.1□□□□□ -0.63
CDC42SE2-212ENST00000515533 PHOX2BQ99453 314 aa11.1□□□□□ -0.63
CDC42SE2-212ENST00000515533 MRIQ9BWK5 157 aa11.1□□□□□ -0.63
CDC42SE2-212ENST00000515533 USP44Q9H0E7 712 aa11.1□□□□□ -0.63
CDC42SE2-212ENST00000515533 ATP13A2Q9NQ11 1180 aa11.1□□□□□ -0.63
CDC42SE2-212ENST00000515533 RPAP1Q9BWH6 1393 aaPredicted RBP11.1□□□□□ -0.63
CDC42SE2-212ENST00000515533 DOCK3Q8IZD9 2030 aa11.09□□□□□ -0.63
CDC42SE2-212ENST00000515533 DOCK1Q14185 1865 aa11.09□□□□□ -0.63
CDC42SE2-212ENST00000515533 EYA2O00167 538 aa11.09□□□□□ -0.63
CDC42SE2-212ENST00000515533 SNAPC2Q13487 334 aa11.09□□□□□ -0.63
CDC42SE2-212ENST00000515533 KIF22Q14807 665 aa11.09□□□□□ -0.63
CDC42SE2-212ENST00000515533 APOBEC3HQ6NTF7 200 aaKnown RBP11.09□□□□□ -0.63
CDC42SE2-212ENST00000515533 LPIN2Q92539 896 aa11.09□□□□□ -0.63
CDC42SE2-212ENST00000515533 ZKSCAN4Q969J2 545 aaPredicted RBP11.09□□□□□ -0.63
CDC42SE2-212ENST00000515533 ZNF341Q9BYN7 854 aa11.09□□□□□ -0.63
CDC42SE2-212ENST00000515533 ZCCHC17Q9NP64 241 aaKnown RBP11.09□□□□□ -0.63
CDC42SE2-212ENST00000515533 SNCAIPQ9Y6H5 919 aa11.09□□□□□ -0.63
CDC42SE2-212ENST00000515533 ATAD5Q96QE3 1844 aa11.09□□□□□ -0.63
CDC42SE2-212ENST00000515533 IRF6O14896 467 aa11.08□□□□□ -0.64
CDC42SE2-212ENST00000515533 TLR2O60603 784 aa11.08□□□□□ -0.64
CDC42SE2-212ENST00000515533 SNRPBP14678 240 aaKnown RBP11.08□□□□□ -0.64
CDC42SE2-212ENST00000515533 FGFR2P21802 821 aa11.08□□□□□ -0.64
CDC42SE2-212ENST00000515533 INSM1Q01101 510 aaPredicted RBP11.08□□□□□ -0.64
CDC42SE2-212ENST00000515533 PPIL2Q13356 520 aa11.08□□□□□ -0.64
CDC42SE2-212ENST00000515533 ALDH1L2Q3SY69 923 aa11.08□□□□□ -0.64
CDC42SE2-212ENST00000515533 LCE2CQ5TA81 110 aa11.08□□□□□ -0.64
CDC42SE2-212ENST00000515533 SMC4Q9NTJ3 1288 aa11.08□□□□□ -0.64
CDC42SE2-212ENST00000515533 GNL3LQ9NVN8 582 aaKnown RBP11.08□□□□□ -0.64
CDC42SE2-212ENST00000515533 PTCH2Q9Y6C5 1203 aa11.08□□□□□ -0.64
CDC42SE2-212ENST00000515533 PHIPQ8WWQ0 1821 aa11.07□□□□□ -0.64
CDC42SE2-212ENST00000515533 BTBD19C9JJ37 291 aa11.07□□□□□ -0.64
CDC42SE2-212ENST00000515533 UBTFL1P0CB47 393 aaPredicted RBP11.07□□□□□ -0.64
CDC42SE2-212ENST00000515533 EN2P19622 333 aaPredicted RBP11.07□□□□□ -0.64
CDC42SE2-212ENST00000515533 CAP1Q01518 475 aa11.07□□□□□ -0.64
CDC42SE2-212ENST00000515533 PPATQ06203 517 aa11.07□□□□□ -0.64
CDC42SE2-212ENST00000515533 ATP2B3Q16720 1220 aa11.07□□□□□ -0.64
CDC42SE2-212ENST00000515533 SLC4A8Q2Y0W8 1093 aa11.07□□□□□ -0.64
CDC42SE2-212ENST00000515533 MIGA2Q7L4E1 593 aa11.07□□□□□ -0.64
CDC42SE2-212ENST00000515533 FAM151AQ8WW52 585 aa11.07□□□□□ -0.64
CDC42SE2-212ENST00000515533 ZNF333Q96JL9 665 aa11.07□□□□□ -0.64
CDC42SE2-212ENST00000515533 MRGPRX2Q96LB1 330 aa11.07□□□□□ -0.64
CDC42SE2-212ENST00000515533 SIL1Q9H173 461 aa11.07□□□□□ -0.64
CDC42SE2-212ENST00000515533 TRIOBPQ9H2D6 2365 aa11.06□□□□□ -0.64
CDC42SE2-212ENST00000515533 J3QL48 77 aa11.06□□□□□ -0.64
CDC42SE2-212ENST00000515533 GNRH1P01148 92 aa11.06□□□□□ -0.64
CDC42SE2-212ENST00000515533 LDHBP07195 334 aaKnown RBP11.06□□□□□ -0.64
CDC42SE2-212ENST00000515533 RFX5P48382 616 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms