RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 HERVK_113P62684 666 aa19.36■□□□□ 0.69
LMNA-223ENST00000515459 FOXP4Q8IVH2 680 aaPredicted RBP19.36■□□□□ 0.69
LMNA-223ENST00000515459 TRIM34Q9BYJ4 488 aa19.36■□□□□ 0.69
LMNA-223ENST00000515459 USP17L10C9JJH3 530 aa19.35■□□□□ 0.69
LMNA-223ENST00000515459 GNAI2P04899 355 aa19.35■□□□□ 0.69
LMNA-223ENST00000515459 MAPK4P31152 587 aa19.35■□□□□ 0.69
LMNA-223ENST00000515459 PDE3AQ14432 1141 aa19.35■□□□□ 0.69
LMNA-223ENST00000515459 TRMT44Q8IYL2 757 aaKnown RBP19.35■□□□□ 0.69
LMNA-223ENST00000515459 CRACR2BQ8N4Y2 399 aaPredicted RBP19.35■□□□□ 0.69
LMNA-223ENST00000515459 TGFBRAP1Q8WUH2 860 aa19.35■□□□□ 0.69
LMNA-223ENST00000515459 DNAJC18Q9H819 358 aa19.35■□□□□ 0.69
LMNA-223ENST00000515459 TXNRD2Q9NNW7 524 aa19.35■□□□□ 0.69
LMNA-223ENST00000515459 GINM1Q9NU53 330 aa19.35■□□□□ 0.69
LMNA-223ENST00000515459 FLT1P17948 1338 aa19.34■□□□□ 0.69
LMNA-223ENST00000515459 PNMA6EA0A0J9YXQ4 647 aa19.34■□□□□ 0.69
LMNA-223ENST00000515459 PEX10O60683 326 aa19.34■□□□□ 0.69
LMNA-223ENST00000515459 MAGEA10P43363 369 aaPredicted RBP19.34■□□□□ 0.69
LMNA-223ENST00000515459 PPP4CP60510 307 aa19.34■□□□□ 0.69
LMNA-223ENST00000515459 JAG1P78504 1218 aa19.34■□□□□ 0.69
LMNA-223ENST00000515459 LRIT3Q3SXY7 679 aa19.34■□□□□ 0.69
LMNA-223ENST00000515459 METTL16Q86W50 562 aaKnown RBP19.34■□□□□ 0.69
LMNA-223ENST00000515459 MAPKAPK5Q8IW41 473 aa19.34■□□□□ 0.69
LMNA-223ENST00000515459 CCAR1Q8IX12 1150 aaKnown RBP19.34■□□□□ 0.69
LMNA-223ENST00000515459 SNRKQ9NRH2 765 aa19.34■□□□□ 0.69
LMNA-223ENST00000515459 RBPJLQ9UBG7 517 aa19.34■□□□□ 0.69
LMNA-223ENST00000515459 MYO5AQ9Y4I1 1855 aaKnown RBP19.33■□□□□ 0.69
LMNA-223ENST00000515459 ZKSCAN1P17029 563 aaPredicted RBP19.33■□□□□ 0.68
LMNA-223ENST00000515459 TTC39AQ5SRH9 613 aa19.33■□□□□ 0.68
LMNA-223ENST00000515459 TDHQ8IZJ6 230 aa19.33■□□□□ 0.68
LMNA-223ENST00000515459 DEFB123Q8N688 67 aa19.33■□□□□ 0.68
LMNA-223ENST00000515459 GTF3C2Q8WUA4 911 aaPredicted RBP19.33■□□□□ 0.68
LMNA-223ENST00000515459 PALD1Q9ULE6 856 aa19.33■□□□□ 0.68
LMNA-223ENST00000515459 PFASO15067 1338 aa19.32■□□□□ 0.68
LMNA-223ENST00000515459 IPO8O15397 1037 aaKnown RBP19.32■□□□□ 0.68
LMNA-223ENST00000515459 GDF11O95390 407 aa19.32■□□□□ 0.68
LMNA-223ENST00000515459 RGS2P41220 211 aa19.32■□□□□ 0.68
LMNA-223ENST00000515459 ERVK-9P63128 1117 aa19.32■□□□□ 0.68
LMNA-223ENST00000515459 ERVK-24P63145 666 aa19.32■□□□□ 0.68
LMNA-223ENST00000515459 CACNB2Q08289 660 aaPredicted RBP19.32■□□□□ 0.68
LMNA-223ENST00000515459 CCDC158Q5M9N0 1113 aa19.32■□□□□ 0.68
LMNA-223ENST00000515459 ADGRA1Q86SQ6 560 aa19.32■□□□□ 0.68
LMNA-223ENST00000515459 ZBTB21Q9ULJ3 1066 aa19.32■□□□□ 0.68
LMNA-223ENST00000515459 TRIM27P14373 513 aa19.31■□□□□ 0.68
LMNA-223ENST00000515459 SHROOM1Q2M3G4 852 aaPredicted RBP19.31■□□□□ 0.68
LMNA-223ENST00000515459 Q3C1V9 767 aa19.31■□□□□ 0.68
LMNA-223ENST00000515459 GPR142Q7Z601 462 aa19.31■□□□□ 0.68
LMNA-223ENST00000515459 USP6NLQ92738 828 aa19.31■□□□□ 0.68
LMNA-223ENST00000515459 PAGR1Q9BTK6 254 aa19.31■□□□□ 0.68
LMNA-223ENST00000515459 UBE2OQ9C0C9 1292 aaKnown RBP19.31■□□□□ 0.68
LMNA-223ENST00000515459 PORCNQ9H237 461 aa19.31■□□□□ 0.68
LMNA-223ENST00000515459 GPR108Q9NPR9 543 aa19.31■□□□□ 0.68
LMNA-223ENST00000515459 COL6A3P12111 3177 aa19.3■□□□□ 0.68
LMNA-223ENST00000515459 IGSF3O75054 1194 aa19.3■□□□□ 0.68
LMNA-223ENST00000515459 CYP2E1P05181 493 aaPredicted RBP19.3■□□□□ 0.68
LMNA-223ENST00000515459 HLA-DOAP06340 250 aa19.3■□□□□ 0.68
LMNA-223ENST00000515459 COL6A1P12109 1028 aa19.3■□□□□ 0.68
LMNA-223ENST00000515459 TNNI3KQ59H18 835 aa19.3■□□□□ 0.68
LMNA-223ENST00000515459 MORN1Q5T089 497 aa19.3■□□□□ 0.68
LMNA-223ENST00000515459 USP17L2Q6R6M4 530 aa19.3■□□□□ 0.68
LMNA-223ENST00000515459 ATF7IPQ6VMQ6 1270 aa19.3■□□□□ 0.68
LMNA-223ENST00000515459 Q7L0L9 218 aa19.3■□□□□ 0.68
LMNA-223ENST00000515459 PLEKHH3Q7Z736 793 aa19.3■□□□□ 0.68
LMNA-223ENST00000515459 CWC22Q9HCG8 908 aaKnown RBP19.3■□□□□ 0.68
LMNA-223ENST00000515459 EMILIN3Q9NT22 766 aa19.3■□□□□ 0.68
LMNA-223ENST00000515459 FPGT-TNNI3KV9GXZ4 949 aa19.3■□□□□ 0.68
LMNA-223ENST00000515459 MYH1P12882 1939 aa19.29■□□□□ 0.68
LMNA-223ENST00000515459 CCND3P30281 292 aaPredicted RBP19.29■□□□□ 0.68
LMNA-223ENST00000515459 CCL14Q16627 93 aa19.29■□□□□ 0.68
LMNA-223ENST00000515459 LHX8Q68G74 356 aa19.29■□□□□ 0.68
LMNA-223ENST00000515459 APBA2Q99767 749 aa19.29■□□□□ 0.68
LMNA-223ENST00000515459 DBNDD2Q9BQY9 259 aa19.29■□□□□ 0.68
LMNA-223ENST00000515459 SAP30BPQ9UHR5 308 aaKnown RBP19.29■□□□□ 0.68
LMNA-223ENST00000515459 FRMPD3Q5JV73 1810 aa19.29■□□□□ 0.68
LMNA-223ENST00000515459 OS9Q13438 667 aaPredicted RBP19.28■□□□□ 0.68
LMNA-223ENST00000515459 FRAT1Q92837 279 aaPredicted RBP19.28■□□□□ 0.68
LMNA-223ENST00000515459 ZNF512BQ96KM6 892 aaPredicted RBP19.28■□□□□ 0.68
LMNA-223ENST00000515459 STXBP5LQ9Y2K9 1186 aa19.28■□□□□ 0.68
LMNA-223ENST00000515459 LRRC26Q2I0M4 334 aa19.27■□□□□ 0.68
LMNA-223ENST00000515459 POTEEQ6S8J3 1075 aa19.27■□□□□ 0.68
LMNA-223ENST00000515459 CLUAP1Q96AJ1 413 aa19.27■□□□□ 0.68
LMNA-223ENST00000515459 TNNQ9UQP3 1299 aa19.27■□□□□ 0.68
LMNA-223ENST00000515459 RABGAP1Q9Y3P9 1069 aa19.27■□□□□ 0.68
LMNA-223ENST00000515459 GLRX3O76003 335 aaKnown RBP19.26■□□□□ 0.67
LMNA-223ENST00000515459 GH2P01242 217 aa19.26■□□□□ 0.67
LMNA-223ENST00000515459 ZAP70P43403 619 aa19.26■□□□□ 0.67
LMNA-223ENST00000515459 DYNLL1P63167 89 aaKnown RBP19.26■□□□□ 0.67
LMNA-223ENST00000515459 CCNA1P78396 465 aa19.26■□□□□ 0.67
LMNA-223ENST00000515459 MAP2K5Q13163 448 aa19.26■□□□□ 0.67
LMNA-223ENST00000515459 POLA2Q14181 598 aa19.26■□□□□ 0.67
LMNA-223ENST00000515459 C12orf42Q96LP6 360 aa19.26■□□□□ 0.67
LMNA-223ENST00000515459 FEZ1Q99689 392 aa19.26■□□□□ 0.67
LMNA-223ENST00000515459 MTMR10Q9NXD2 777 aa19.26■□□□□ 0.67
LMNA-223ENST00000515459 USP17L15C9J2P7 530 aa19.25■□□□□ 0.67
LMNA-223ENST00000515459 USP17L13C9JLJ4 530 aa19.25■□□□□ 0.67
LMNA-223ENST00000515459 USP17L11C9JVI0 530 aa19.25■□□□□ 0.67
LMNA-223ENST00000515459 USP17L18D6R9N7 530 aa19.25■□□□□ 0.67
LMNA-223ENST00000515459 USP17L22D6RA61 530 aa19.25■□□□□ 0.67
LMNA-223ENST00000515459 USP17L17D6RBQ6 530 aa19.25■□□□□ 0.67
LMNA-223ENST00000515459 USP17L19D6RCP7 530 aa19.25■□□□□ 0.67
LMNA-223ENST00000515459 USP17L20D6RJB6 530 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms