RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 DPH6Q7L8W6 267 aa14.79□□□□□ -0.04
TCOF1-214ENST00000515035 PPM1FP49593 454 aaPredicted RBP14.79□□□□□ -0.04
TCOF1-214ENST00000515035 SPATS2Q86XZ4 545 aaKnown RBP14.79□□□□□ -0.04
TCOF1-214ENST00000515035 NCOA5Q9HCD5 579 aaKnown RBP14.79□□□□□ -0.04
TCOF1-214ENST00000515035 PLCB1Q9NQ66 1216 aa14.79□□□□□ -0.04
TCOF1-214ENST00000515035 SPDYE3A6NKU9 549 aa14.79□□□□□ -0.04
TCOF1-214ENST00000515035 RASSF2P50749 326 aa14.79□□□□□ -0.04
TCOF1-214ENST00000515035 MUM1Q2TAK8 710 aa14.79□□□□□ -0.04
TCOF1-214ENST00000515035 CNNM4Q6P4Q7 775 aa14.79□□□□□ -0.04
TCOF1-214ENST00000515035 ADGRL2O95490 1459 aa14.79□□□□□ -0.04
TCOF1-214ENST00000515035 EPB41P11171 864 aaKnown RBP14.79□□□□□ -0.04
TCOF1-214ENST00000515035 AKNAD1Q5T1N1 836 aa14.79□□□□□ -0.04
TCOF1-214ENST00000515035 LRCH2Q5VUJ6 765 aa14.79□□□□□ -0.04
TCOF1-214ENST00000515035 CDC37L1Q7L3B6 337 aa14.79□□□□□ -0.04
TCOF1-214ENST00000515035 MAGEB6P1A0A0J9YX57 407 aa14.79□□□□□ -0.04
TCOF1-214ENST00000515035 CETN3O15182 167 aa14.79□□□□□ -0.04
TCOF1-214ENST00000515035 RPS6KA1Q15418 735 aa14.79□□□□□ -0.04
TCOF1-214ENST00000515035 OTUD7BQ6GQQ9 843 aa14.79□□□□□ -0.04
TCOF1-214ENST00000515035 RPAINQ86UA6 219 aa14.79□□□□□ -0.04
TCOF1-214ENST00000515035 OGFOD1Q8N543 542 aa14.79□□□□□ -0.04
TCOF1-214ENST00000515035 CAPS2Q9BXY5 557 aa14.79□□□□□ -0.04
TCOF1-214ENST00000515035 ERCC3P19447 782 aa14.78□□□□□ -0.04
TCOF1-214ENST00000515035 SLC8A1P32418 973 aa14.78□□□□□ -0.04
TCOF1-214ENST00000515035 TRIM68Q6AZZ1 485 aa14.78□□□□□ -0.04
TCOF1-214ENST00000515035 TFCP2Q12800 502 aa14.78□□□□□ -0.04
TCOF1-214ENST00000515035 PLS1Q14651 629 aa14.78□□□□□ -0.04
TCOF1-214ENST00000515035 WWC3Q9ULE0 1092 aa14.78□□□□□ -0.04
TCOF1-214ENST00000515035 TMEM2Q9UHN6 1383 aa14.78□□□□□ -0.04
TCOF1-214ENST00000515035 RNMTO43148 476 aaKnown RBP14.78□□□□□ -0.04
TCOF1-214ENST00000515035 KRT15P19012 456 aa14.78□□□□□ -0.04
TCOF1-214ENST00000515035 ADKP55263 362 aaKnown RBP14.78□□□□□ -0.04
TCOF1-214ENST00000515035 MRPS9P82933 396 aaKnown RBP14.78□□□□□ -0.04
TCOF1-214ENST00000515035 KRT24Q2M2I5 525 aa14.78□□□□□ -0.04
TCOF1-214ENST00000515035 LETM2Q2VYF4 491 aa14.78□□□□□ -0.04
TCOF1-214ENST00000515035 PPP1R21Q6ZMI0 780 aa14.78□□□□□ -0.04
TCOF1-214ENST00000515035 EPSTI1Q96J88 318 aa14.78□□□□□ -0.04
TCOF1-214ENST00000515035 ODF2LQ9ULJ1 636 aa14.78□□□□□ -0.04
TCOF1-214ENST00000515035 FRMD4BQ9Y2L6 1034 aa14.78□□□□□ -0.04
TCOF1-214ENST00000515035 ATP1A2P50993 1020 aa14.78□□□□□ -0.04
TCOF1-214ENST00000515035 ZNF804AQ7Z570 1209 aa14.78□□□□□ -0.04
TCOF1-214ENST00000515035 MED4Q9NPJ6 270 aa14.78□□□□□ -0.04
TCOF1-214ENST00000515035 DIS3L2Q8IYB7 885 aaKnown RBP14.77□□□□□ -0.04
TCOF1-214ENST00000515035 MAK16Q9BXY0 300 aaKnown RBP14.77□□□□□ -0.04
TCOF1-214ENST00000515035 ZMYM4Q5VZL5 1548 aa14.77□□□□□ -0.04
TCOF1-214ENST00000515035 EDC4Q6P2E9 1401 aaKnown RBP14.77□□□□□ -0.04
TCOF1-214ENST00000515035 SGSM2O43147 1006 aa14.77□□□□□ -0.04
TCOF1-214ENST00000515035 DEXIO95424 95 aa14.77□□□□□ -0.04
TCOF1-214ENST00000515035 CTNNA1P35221 906 aaKnown RBP14.77□□□□□ -0.04
TCOF1-214ENST00000515035 MAP7Q14244 749 aa14.77□□□□□ -0.04
TCOF1-214ENST00000515035 CWF19L2Q2TBE0 894 aaKnown RBP14.77□□□□□ -0.04
TCOF1-214ENST00000515035 DENND2CQ68D51 928 aa14.77□□□□□ -0.04
TCOF1-214ENST00000515035 PHLDB3Q6NSJ2 640 aa14.77□□□□□ -0.04
TCOF1-214ENST00000515035 TRMT44Q8IYL2 757 aaKnown RBP14.77□□□□□ -0.04
TCOF1-214ENST00000515035 MIGA1Q8NAN2 632 aa14.77□□□□□ -0.04
TCOF1-214ENST00000515035 TBC1D31Q96DN5 1066 aa14.77□□□□□ -0.04
TCOF1-214ENST00000515035 ORAI2Q96SN7 254 aa14.77□□□□□ -0.04
TCOF1-214ENST00000515035 FAM204AQ9H8W3 233 aa14.77□□□□□ -0.04
TCOF1-214ENST00000515035 GOLGA8KD6RF30 607 aa14.77□□□□□ -0.05
TCOF1-214ENST00000515035 DTNBO60941 627 aa14.77□□□□□ -0.05
TCOF1-214ENST00000515035 GUCY2FP51841 1108 aa14.77□□□□□ -0.05
TCOF1-214ENST00000515035 POSTNQ15063 836 aa14.77□□□□□ -0.05
TCOF1-214ENST00000515035 ZKSCAN3Q9BRR0 538 aa14.77□□□□□ -0.05
TCOF1-214ENST00000515035 SBNO1A3KN83 1393 aa14.77□□□□□ -0.05
TCOF1-214ENST00000515035 RGS16O15492 202 aaPredicted RBP14.77□□□□□ -0.05
TCOF1-214ENST00000515035 MGARPQ8TDB4 240 aa14.77□□□□□ -0.05
TCOF1-214ENST00000515035 HELLSQ9NRZ9 838 aa14.77□□□□□ -0.05
TCOF1-214ENST00000515035 SLAIN2Q9P270 581 aa14.77□□□□□ -0.05
TCOF1-214ENST00000515035 AGTPBP1Q9UPW5 1226 aa14.77□□□□□ -0.05
TCOF1-214ENST00000515035 GEN1Q17RS7 908 aa14.76□□□□□ -0.05
TCOF1-214ENST00000515035 GPIHBP1Q8IV16 184 aa14.76□□□□□ -0.05
TCOF1-214ENST00000515035 FAM71BQ8TC56 605 aa14.76□□□□□ -0.05
TCOF1-214ENST00000515035 PLEKHA4Q9H4M7 779 aa14.76□□□□□ -0.05
TCOF1-214ENST00000515035 RABGAP1Q9Y3P9 1069 aa14.76□□□□□ -0.05
TCOF1-214ENST00000515035 STX2P32856 288 aa14.76□□□□□ -0.05
TCOF1-214ENST00000515035 GAS2L3Q86XJ1 694 aa14.76□□□□□ -0.05
TCOF1-214ENST00000515035 DESI2Q9BSY9 194 aa14.76□□□□□ -0.05
TCOF1-214ENST00000515035 IFIH1Q9BYX4 1025 aaKnown RBP14.76□□□□□ -0.05
TCOF1-214ENST00000515035 SNX16P57768 344 aa14.76□□□□□ -0.05
TCOF1-214ENST00000515035 MAGEB6Q8N7X4 407 aa14.76□□□□□ -0.05
TCOF1-214ENST00000515035 ANKRD42Q8N9B4 389 aa14.76□□□□□ -0.05
TCOF1-214ENST00000515035 KIFAP3Q92845 792 aa14.76□□□□□ -0.05
TCOF1-214ENST00000515035 FAM212AQ96EL1 285 aa14.76□□□□□ -0.05
TCOF1-214ENST00000515035 CTTNBP2NLQ9P2B4 639 aa14.76□□□□□ -0.05
TCOF1-214ENST00000515035 TACC3Q9Y6A5 838 aa14.76□□□□□ -0.05
TCOF1-214ENST00000515035 NPC1L1Q9UHC9 1359 aa14.76□□□□□ -0.05
TCOF1-214ENST00000515035 COL17A1Q9UMD9 1497 aaPredicted RBP14.76□□□□□ -0.05
TCOF1-214ENST00000515035 I3L4J1 428 aa14.76□□□□□ -0.05
TCOF1-214ENST00000515035 SH3BGRP55822 239 aaPredicted RBP14.76□□□□□ -0.05
TCOF1-214ENST00000515035 DIXDC1Q155Q3 683 aa14.76□□□□□ -0.05
TCOF1-214ENST00000515035 CCDC105Q8IYK2 499 aa14.76□□□□□ -0.05
TCOF1-214ENST00000515035 STAG1Q8WVM7 1258 aa14.76□□□□□ -0.05
TCOF1-214ENST00000515035 KLHL14Q9P2G3 628 aa14.76□□□□□ -0.05
TCOF1-214ENST00000515035 KRT5P13647 590 aa14.75□□□□□ -0.05
TCOF1-214ENST00000515035 PEX26Q7Z412 305 aa14.75□□□□□ -0.05
TCOF1-214ENST00000515035 CCDC51Q96ER9 411 aa14.75□□□□□ -0.05
TCOF1-214ENST00000515035 ZC3H12CQ9C0D7 883 aaKnown RBP14.75□□□□□ -0.05
TCOF1-214ENST00000515035 MCM9Q9NXL9 1143 aa14.75□□□□□ -0.05
TCOF1-214ENST00000515035 RRP15Q9Y3B9 282 aaKnown RBP14.75□□□□□ -0.05
TCOF1-214ENST00000515035 SH2D4BQ5SQS7 431 aa14.75□□□□□ -0.05
TCOF1-214ENST00000515035 TRAPPC3LQ5T215 181 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 269.4 ms