RNA–Protein interactions for RNA: ENST00000515005.1

SMAD5-210, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-210ENST00000515005 LRRC24Q50LG9 513 aa14.91□□□□□ -0.02
SMAD5-210ENST00000515005 METTL24Q5JXM2 366 aa14.91□□□□□ -0.02
SMAD5-210ENST00000515005 VGLL2Q8N8G2 317 aa14.91□□□□□ -0.02
SMAD5-210ENST00000515005 ARRDC4Q8NCT1 418 aa14.91□□□□□ -0.02
SMAD5-210ENST00000515005 KHSRPQ92945 711 aaKnown RBP eCLIP14.91□□□□□ -0.02
SMAD5-210ENST00000515005 EDC3Q96F86 508 aaKnown RBP14.91□□□□□ -0.02
SMAD5-210ENST00000515005 DDX4Q9NQI0 724 aaKnown RBP14.91□□□□□ -0.02
SMAD5-210ENST00000515005 TACC3Q9Y6A5 838 aa14.91□□□□□ -0.02
SMAD5-210ENST00000515005 NDUFB9Q9Y6M9 179 aa14.91□□□□□ -0.02
SMAD5-210ENST00000515005 MYH2Q9UKX2 1941 aa14.91□□□□□ -0.02
SMAD5-210ENST00000515005 KBTBD13C9JR72 458 aa14.9□□□□□ -0.02
SMAD5-210ENST00000515005 PDE8BO95263 885 aa14.9□□□□□ -0.02
SMAD5-210ENST00000515005 MYCNP04198 464 aaPredicted RBP14.9□□□□□ -0.02
SMAD5-210ENST00000515005 HOXA7P31268 230 aaPredicted RBP14.9□□□□□ -0.02
SMAD5-210ENST00000515005 CYP2C19P33261 490 aa14.9□□□□□ -0.02
SMAD5-210ENST00000515005 ADCYAP1R1P41586 468 aa14.9□□□□□ -0.02
SMAD5-210ENST00000515005 ANO1Q5XXA6 986 aa14.9□□□□□ -0.02
SMAD5-210ENST00000515005 PAGR1Q9BTK6 254 aa14.9□□□□□ -0.02
SMAD5-210ENST00000515005 ADAMTS8Q9UP79 889 aa14.9□□□□□ -0.02
SMAD5-210ENST00000515005 CHD7Q9P2D1 2997 aa14.9□□□□□ -0.02
SMAD5-210ENST00000515005 KIAA0355O15063 1070 aa14.89□□□□□ -0.03
SMAD5-210ENST00000515005 CLTBP09497 229 aa14.89□□□□□ -0.03
SMAD5-210ENST00000515005 RAG1P15918 1043 aa14.89□□□□□ -0.03
SMAD5-210ENST00000515005 CALD1Q05682 793 aaKnown RBP14.89□□□□□ -0.03
SMAD5-210ENST00000515005 PICALMQ13492 652 aa14.89□□□□□ -0.03
SMAD5-210ENST00000515005 RRP1BQ14684 758 aaKnown RBP14.89□□□□□ -0.03
SMAD5-210ENST00000515005 BEND3Q5T5X7 828 aa14.89□□□□□ -0.03
SMAD5-210ENST00000515005 C1orf53Q5VUE5 145 aa14.89□□□□□ -0.03
SMAD5-210ENST00000515005 CCDC129Q6ZRS4 1044 aa14.89□□□□□ -0.03
SMAD5-210ENST00000515005 OSBPL5Q9H0X9 879 aaPredicted RBP14.89□□□□□ -0.03
SMAD5-210ENST00000515005 TSPYL2Q9H2G4 693 aaPredicted RBP14.89□□□□□ -0.03
SMAD5-210ENST00000515005 USP17L5A8MUK1 530 aa14.88□□□□□ -0.03
SMAD5-210ENST00000515005 F6X3S4 739 aa14.88□□□□□ -0.03
SMAD5-210ENST00000515005 GRM8O00222 908 aa14.88□□□□□ -0.03
SMAD5-210ENST00000515005 TBC1D12O60347 775 aa14.88□□□□□ -0.03
SMAD5-210ENST00000515005 LDHBP07195 334 aaKnown RBP14.88□□□□□ -0.03
SMAD5-210ENST00000515005 ATP2B2Q01814 1243 aa14.88□□□□□ -0.03
SMAD5-210ENST00000515005 MTMR2Q13614 643 aa14.88□□□□□ -0.03
SMAD5-210ENST00000515005 AAK1Q2M2I8 961 aa14.88□□□□□ -0.03
SMAD5-210ENST00000515005 TSR2Q969E8 191 aaKnown RBP14.88□□□□□ -0.03
SMAD5-210ENST00000515005 TBC1D2Q9BYX2 928 aa14.88□□□□□ -0.03
SMAD5-210ENST00000515005 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.88□□□□□ -0.03
SMAD5-210ENST00000515005 CWC22Q9HCG8 908 aaKnown RBP14.88□□□□□ -0.03
SMAD5-210ENST00000515005 PRRC2BQ5JSZ5 2229 aaKnown RBP14.87□□□□□ -0.03
SMAD5-210ENST00000515005 CYBAP13498 195 aa14.87□□□□□ -0.03
SMAD5-210ENST00000515005 CAP2P40123 477 aa14.87□□□□□ -0.03
SMAD5-210ENST00000515005 MICALL1Q8N3F8 863 aa14.87□□□□□ -0.03
SMAD5-210ENST00000515005 NPLOC4Q8TAT6 608 aa14.87□□□□□ -0.03
SMAD5-210ENST00000515005 CCER1Q8TC90 406 aaPredicted RBP14.87□□□□□ -0.03
SMAD5-210ENST00000515005 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.87□□□□□ -0.03
SMAD5-210ENST00000515005 MYBBP1AQ9BQG0 1328 aaKnown RBP14.87□□□□□ -0.03
SMAD5-210ENST00000515005 SMIM22K7EJ46 135 aa14.86□□□□□ -0.03
SMAD5-210ENST00000515005 FGFR2P21802 821 aa14.86□□□□□ -0.03
SMAD5-210ENST00000515005 BACE1P56817 501 aa14.86□□□□□ -0.03
SMAD5-210ENST00000515005 WDR43Q15061 677 aaKnown RBP eCLIP14.86□□□□□ -0.03
SMAD5-210ENST00000515005 TWISTNBQ3B726 338 aaPredicted RBP14.86□□□□□ -0.03
SMAD5-210ENST00000515005 KAZALD1Q96I82 304 aa14.86□□□□□ -0.03
SMAD5-210ENST00000515005 TMOD4Q9NZQ9 345 aa14.86□□□□□ -0.03
SMAD5-210ENST00000515005 GBF1Q92538 1859 aa14.86□□□□□ -0.03
SMAD5-210ENST00000515005 KIF16BQ96L93 1317 aa14.86□□□□□ -0.03
SMAD5-210ENST00000515005 CACNA1FO60840 1977 aa14.85□□□□□ -0.03
SMAD5-210ENST00000515005 APAF1O14727 1248 aa14.85□□□□□ -0.03
SMAD5-210ENST00000515005 PQBP1O60828 265 aaKnown RBP14.85□□□□□ -0.03
SMAD5-210ENST00000515005 IGHA2P01877 340 aa14.85□□□□□ -0.03
SMAD5-210ENST00000515005 HOXC6P09630 235 aa14.85□□□□□ -0.03
SMAD5-210ENST00000515005 IFIT1P09914 478 aaKnown RBP14.85□□□□□ -0.03
SMAD5-210ENST00000515005 PTPREP23469 700 aa14.85□□□□□ -0.03
SMAD5-210ENST00000515005 LRRC41Q15345 812 aa14.85□□□□□ -0.03
SMAD5-210ENST00000515005 WDR78Q5VTH9 848 aa14.85□□□□□ -0.03
SMAD5-210ENST00000515005 SUCLG2Q96I99 432 aa14.85□□□□□ -0.03
SMAD5-210ENST00000515005 AS3MTQ9HBK9 375 aa14.85□□□□□ -0.03
SMAD5-210ENST00000515005 TMEM39AQ9NV64 488 aa14.85□□□□□ -0.03
SMAD5-210ENST00000515005 GAKO14976 1311 aa14.85□□□□□ -0.03
SMAD5-210ENST00000515005 SMCHD1A6NHR9 2005 aa14.85□□□□□ -0.03
SMAD5-210ENST00000515005 SLC15A5A6NIM6 579 aa14.84□□□□□ -0.03
SMAD5-210ENST00000515005 GLRX3O76003 335 aaKnown RBP14.84□□□□□ -0.03
SMAD5-210ENST00000515005 NHLH1Q02575 133 aa14.84□□□□□ -0.03
SMAD5-210ENST00000515005 PUM3Q15397 648 aaKnown RBP14.84□□□□□ -0.03
SMAD5-210ENST00000515005 RASIP1Q5U651 963 aa14.84□□□□□ -0.03
SMAD5-210ENST00000515005 C16orf59Q7L2K0 433 aa14.84□□□□□ -0.03
SMAD5-210ENST00000515005 WDR18Q9BV38 432 aa14.84□□□□□ -0.03
SMAD5-210ENST00000515005 C9orf78Q9NZ63 289 aaPredicted RBP14.84□□□□□ -0.03
SMAD5-210ENST00000515005 LRRC37A2A6NM11 1700 aa14.83□□□□□ -0.03
SMAD5-210ENST00000515005 ERC2O15083 957 aa14.83□□□□□ -0.04
SMAD5-210ENST00000515005 CNMDO75829 334 aa14.83□□□□□ -0.04
SMAD5-210ENST00000515005 SKIV2LQ15477 1246 aaKnown RBP14.83□□□□□ -0.04
SMAD5-210ENST00000515005 KLHDC4Q8TBB5 520 aa14.83□□□□□ -0.04
SMAD5-210ENST00000515005 NKX2-4Q9H2Z4 354 aa14.83□□□□□ -0.04
SMAD5-210ENST00000515005 PI4K2BG5E9Z4 385 aa14.82□□□□□ -0.04
SMAD5-210ENST00000515005 SEPT4O43236 478 aa14.82□□□□□ -0.04
SMAD5-210ENST00000515005 TLL1O43897 1013 aa14.82□□□□□ -0.04
SMAD5-210ENST00000515005 FAAP100Q0VG06 881 aa14.82□□□□□ -0.04
SMAD5-210ENST00000515005 GRB14Q14449 540 aa14.82□□□□□ -0.04
SMAD5-210ENST00000515005 NCBP3Q53F19 620 aaKnown RBP14.82□□□□□ -0.04
SMAD5-210ENST00000515005 FAM47AQ5JRC9 791 aa14.82□□□□□ -0.04
SMAD5-210ENST00000515005 TMEM240Q5SV17 173 aa14.82□□□□□ -0.04
SMAD5-210ENST00000515005 SLC44A5Q8NCS7 719 aa14.82□□□□□ -0.04
SMAD5-210ENST00000515005 GTF3C2Q8WUA4 911 aaPredicted RBP14.82□□□□□ -0.04
SMAD5-210ENST00000515005 MSRAQ9UJ68 235 aa14.82□□□□□ -0.04
SMAD5-210ENST00000515005 PHF24Q9UPV7 400 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms