RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 PNMA3Q9UL41 463 aa29.58■■■□□ 2.33
SNF8-213ENST00000514929 BCRP11274 1271 aa29.57■■■□□ 2.32
SNF8-213ENST00000514929 PSMC4P43686 418 aa29.57■■■□□ 2.32
SNF8-213ENST00000514929 UBE3CQ15386 1083 aa29.57■■■□□ 2.32
SNF8-213ENST00000514929 TATDN1Q6P1N9 297 aa29.57■■■□□ 2.32
SNF8-213ENST00000514929 PTCH2Q9Y6C5 1203 aa29.57■■■□□ 2.32
SNF8-213ENST00000514929 PLCD1P51178 756 aa29.56■■■□□ 2.32
SNF8-213ENST00000514929 PABPC4Q13310 644 aaKnown RBP eCLIP29.56■■■□□ 2.322e-8■■■□□ 14.6
SNF8-213ENST00000514929 MTMR2Q13614 643 aa29.56■■■□□ 2.32
SNF8-213ENST00000514929 SH3D19Q5HYK7 790 aa29.56■■■□□ 2.32
SNF8-213ENST00000514929 TSHZ3Q63HK5 1081 aa29.56■■■□□ 2.32
SNF8-213ENST00000514929 LOC285556D6RIA3 1793 aa29.56■■■□□ 2.32
SNF8-213ENST00000514929 DDX60LQ5H9U9 1706 aaKnown RBP29.56■■■□□ 2.32
SNF8-213ENST00000514929 HTTP42858 3142 aa29.56■■■□□ 2.32
SNF8-213ENST00000514929 MYH7P12883 1935 aa29.55■■■□□ 2.32
SNF8-213ENST00000514929 FMNL1O95466 1100 aaPredicted RBP29.55■■■□□ 2.32
SNF8-213ENST00000514929 GH2P01242 217 aa29.55■■■□□ 2.32
SNF8-213ENST00000514929 BACE1P56817 501 aa29.55■■■□□ 2.32
SNF8-213ENST00000514929 DCP1AQ9NPI6 582 aaPredicted RBP29.55■■■□□ 2.32
SNF8-213ENST00000514929 TMOD4Q9NZQ9 345 aa29.55■■■□□ 2.32
SNF8-213ENST00000514929 CHGBP05060 677 aa29.54■■■□□ 2.32
SNF8-213ENST00000514929 PRMT2P55345 433 aa29.54■■■□□ 2.32
SNF8-213ENST00000514929 CERKLQ49MI3 558 aaPredicted RBP29.54■■■□□ 2.32
SNF8-213ENST00000514929 TRIM47Q96LD4 638 aa29.54■■■□□ 2.32
SNF8-213ENST00000514929 HOXD10P28358 340 aa29.53■■■□□ 2.32
SNF8-213ENST00000514929 CTGFP29279 349 aa29.53■■■□□ 2.32
SNF8-213ENST00000514929 SLC9C1Q4G0N8 1177 aa29.53■■■□□ 2.32
SNF8-213ENST00000514929 ARMC5Q96C12 935 aa29.53■■■□□ 2.32
SNF8-213ENST00000514929 ZBTB47Q9UFB7 747 aaPredicted RBP29.53■■■□□ 2.32
SNF8-213ENST00000514929 C19orf81C9J6K1 198 aa29.52■■■□□ 2.32
SNF8-213ENST00000514929 USP17L10C9JJH3 530 aa29.52■■■□□ 2.32
SNF8-213ENST00000514929 PRKAB2O43741 272 aa29.52■■■□□ 2.32
SNF8-213ENST00000514929 OSBPP22059 807 aa29.52■■■□□ 2.32
SNF8-213ENST00000514929 ABCB5Q2M3G0 1257 aa29.52■■■□□ 2.32
SNF8-213ENST00000514929 NBPF11Q86T75 865 aa29.52■■■□□ 2.32
SNF8-213ENST00000514929 KBTBD3Q8NAB2 608 aa29.52■■■□□ 2.32
SNF8-213ENST00000514929 ATP8A2Q9NTI2 1148 aa29.52■■■□□ 2.32
SNF8-213ENST00000514929 TTC41PQ6P2S7 1318 aa29.51■■■□□ 2.32
SNF8-213ENST00000514929 SHMT1P34896 483 aa29.51■■■□□ 2.31
SNF8-213ENST00000514929 FCGRTP55899 365 aa29.51■■■□□ 2.31
SNF8-213ENST00000514929 CABP5Q9NP86 173 aa29.51■■■□□ 2.31
SNF8-213ENST00000514929 SRRDQ9UH36 339 aa29.51■■■□□ 2.31
SNF8-213ENST00000514929 RAB3GAP1Q15042 981 aa29.5■■■□□ 2.31
SNF8-213ENST00000514929 DDRGK1Q96HY6 314 aa29.5■■■□□ 2.31
SNF8-213ENST00000514929 ERC2O15083 957 aa29.49■■■□□ 2.31
SNF8-213ENST00000514929 CYP2D6P10635 497 aa29.49■■■□□ 2.31
SNF8-213ENST00000514929 EVX2Q03828 476 aa29.49■■■□□ 2.31
SNF8-213ENST00000514929 GABPAQ06546 454 aa29.49■■■□□ 2.31
SNF8-213ENST00000514929 AMOTL1Q8IY63 956 aa29.49■■■□□ 2.31
SNF8-213ENST00000514929 ANKRD13CQ8N6S4 541 aa29.49■■■□□ 2.31
SNF8-213ENST00000514929 PUS7LQ9H0K6 701 aaKnown RBP29.49■■■□□ 2.31
SNF8-213ENST00000514929 ASCC2Q9H1I8 757 aaPredicted RBP29.49■■■□□ 2.31
SNF8-213ENST00000514929 SLC4A4Q9Y6R1 1079 aa29.49■■■□□ 2.31
SNF8-213ENST00000514929 ANKRD45Q5TZF3 282 aa29.48■■■□□ 2.31
SNF8-213ENST00000514929 OTUD7AQ8TE49 926 aaPredicted RBP29.48■■■□□ 2.31
SNF8-213ENST00000514929 FEZ1Q99689 392 aa29.48■■■□□ 2.31
SNF8-213ENST00000514929 MYPNQ86TC9 1320 aa29.47■■■□□ 2.31
SNF8-213ENST00000514929 GCLCP48506 637 aaPredicted RBP29.47■■■□□ 2.31
SNF8-213ENST00000514929 IRX3P78415 501 aaPredicted RBP29.47■■■□□ 2.31
SNF8-213ENST00000514929 HDAC1Q13547 482 aaPredicted RBP29.47■■■□□ 2.31
SNF8-213ENST00000514929 AAMPQ13685 434 aa29.47■■■□□ 2.31
SNF8-213ENST00000514929 USP17L2Q6R6M4 530 aa29.47■■■□□ 2.31
SNF8-213ENST00000514929 RAET1EQ8TD07 263 aa29.47■■■□□ 2.31
SNF8-213ENST00000514929 GCC1Q96CN9 775 aa29.47■■■□□ 2.31
SNF8-213ENST00000514929 GLRX3O76003 335 aaKnown RBP29.46■■■□□ 2.31
SNF8-213ENST00000514929 FAM110CQ1W6H9 321 aa29.46■■■□□ 2.31
SNF8-213ENST00000514929 SH3TC2Q8TF17 1288 aa29.46■■■□□ 2.31
SNF8-213ENST00000514929 ZNF333Q96JL9 665 aa29.46■■■□□ 2.31
SNF8-213ENST00000514929 SWAP70Q9UH65 585 aa29.46■■■□□ 2.31
SNF8-213ENST00000514929 MGAMO43451 1857 aa29.45■■■□□ 2.31
SNF8-213ENST00000514929 MPHOSPH10O00566 681 aaKnown RBP29.45■■■□□ 2.31
SNF8-213ENST00000514929 RNF113AO15541 343 aaKnown RBP29.45■■■□□ 2.31
SNF8-213ENST00000514929 ZFYP08048 801 aaPredicted RBP29.45■■■□□ 2.31
SNF8-213ENST00000514929 MX1P20591 662 aa29.45■■■□□ 2.31
SNF8-213ENST00000514929 HOXA7P31268 230 aaPredicted RBP29.45■■■□□ 2.31
SNF8-213ENST00000514929 ZYXQ15942 572 aaKnown RBP29.45■■■□□ 2.31
SNF8-213ENST00000514929 LRRFIP1Q32MZ4 808 aaKnown RBP29.45■■■□□ 2.31
SNF8-213ENST00000514929 PI4K2BQ8TCG2 481 aa29.45■■■□□ 2.31
SNF8-213ENST00000514929 APPBP2Q92624 585 aa29.45■■■□□ 2.31
SNF8-213ENST00000514929 CENPFP49454 3210 aa29.45■■■□□ 2.3
SNF8-213ENST00000514929 BAZ2AQ9UIF9 1905 aaKnown RBP29.44■■■□□ 2.3
SNF8-213ENST00000514929 USP17L12C9JPN9 530 aa29.44■■■□□ 2.3
SNF8-213ENST00000514929 USP17L21D6R901 530 aa29.44■■■□□ 2.3
SNF8-213ENST00000514929 TNPO2O14787 897 aaKnown RBP29.44■■■□□ 2.3
SNF8-213ENST00000514929 PRKCZQ05513 592 aa29.44■■■□□ 2.3
SNF8-213ENST00000514929 SLC44A5Q8NCS7 719 aa29.44■■■□□ 2.3
SNF8-213ENST00000514929 DYNLL2Q96FJ2 89 aa29.44■■■□□ 2.3
SNF8-213ENST00000514929 TMEM106CQ9BVX2 250 aa29.44■■■□□ 2.3
SNF8-213ENST00000514929 EMILIN3Q9NT22 766 aa29.44■■■□□ 2.3
SNF8-213ENST00000514929 TAOK2Q9UL54 1235 aa29.44■■■□□ 2.3
SNF8-213ENST00000514929 POTEFA5A3E0 1075 aa29.43■■■□□ 2.3
SNF8-213ENST00000514929 C12orf60Q5U649 245 aa29.43■■■□□ 2.3
SNF8-213ENST00000514929 CYP2D7A0A087X1C5 515 aa29.42■■■□□ 2.3
SNF8-213ENST00000514929 MYCP01106 439 aaPredicted RBP29.42■■■□□ 2.3
SNF8-213ENST00000514929 USP14P54578 494 aa29.42■■■□□ 2.3
SNF8-213ENST00000514929 SEPT2Q15019 361 aa29.42■■■□□ 2.3
SNF8-213ENST00000514929 OSBP2Q969R2 916 aa29.42■■■□□ 2.3
SNF8-213ENST00000514929 STRBPQ96SI9 672 aaKnown RBP29.42■■■□□ 2.3
SNF8-213ENST00000514929 KIAA1683Q9H0B3 1180 aa29.42■■■□□ 2.3
SNF8-213ENST00000514929 GUCY1A2P33402 732 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms