RNA–Protein interactions for RNA: ENST00000514834.1

ITGA3-214, Transcript of integrin subunit alpha 3, humanhuman

TSL 1 (best)

Gene ITGA3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-214ENST00000514834 TRIM34Q9BYJ4 488 aa16.78■□□□□ 0.28
ITGA3-214ENST00000514834 PUS7LQ9H0K6 701 aaKnown RBP16.78■□□□□ 0.28
ITGA3-214ENST00000514834 DCP1AQ9NPI6 582 aaPredicted RBP16.78■□□□□ 0.28
ITGA3-214ENST00000514834 SERPINB13Q9UIV8 391 aa16.78■□□□□ 0.28
ITGA3-214ENST00000514834 ZBTB21Q9ULJ3 1066 aa16.78■□□□□ 0.28
ITGA3-214ENST00000514834 CYP2D7A0A087X1C5 515 aa16.77■□□□□ 0.28
ITGA3-214ENST00000514834 GH2P01242 217 aa16.77■□□□□ 0.28
ITGA3-214ENST00000514834 ASNSP08243 561 aa16.77■□□□□ 0.28
ITGA3-214ENST00000514834 SHMT1P34896 483 aa16.77■□□□□ 0.28
ITGA3-214ENST00000514834 MTMR2Q13614 643 aa16.77■□□□□ 0.28
ITGA3-214ENST00000514834 EXOC6Q8TAG9 804 aa16.77■□□□□ 0.28
ITGA3-214ENST00000514834 TRIM47Q96LD4 638 aa16.77■□□□□ 0.28
ITGA3-214ENST00000514834 PARK7Q99497 189 aaKnown RBP16.77■□□□□ 0.28
ITGA3-214ENST00000514834 WDR18Q9BV38 432 aa16.77■□□□□ 0.28
ITGA3-214ENST00000514834 EHD4Q9H223 541 aa16.77■□□□□ 0.28
ITGA3-214ENST00000514834 MCM9Q9NXL9 1143 aa16.77■□□□□ 0.28
ITGA3-214ENST00000514834 AGTPBP1Q9UPW5 1226 aa16.77■□□□□ 0.28
ITGA3-214ENST00000514834 PTCH2Q9Y6C5 1203 aa16.77■□□□□ 0.28
ITGA3-214ENST00000514834 POLR3DP05423 398 aaPredicted RBP16.76■□□□□ 0.27
ITGA3-214ENST00000514834 GABPAQ06546 454 aa16.76■□□□□ 0.27
ITGA3-214ENST00000514834 UBE3CQ15386 1083 aa16.76■□□□□ 0.27
ITGA3-214ENST00000514834 SH3D19Q5HYK7 790 aa16.76■□□□□ 0.27
ITGA3-214ENST00000514834 TTC6Q86TZ1 520 aa16.76■□□□□ 0.27
ITGA3-214ENST00000514834 SLC44A5Q8NCS7 719 aa16.76■□□□□ 0.27
ITGA3-214ENST00000514834 PI4K2BQ8TCG2 481 aa16.76■□□□□ 0.27
ITGA3-214ENST00000514834 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.76■□□□□ 0.27
ITGA3-214ENST00000514834 GUCY1A2P33402 732 aa16.75■□□□□ 0.27
ITGA3-214ENST00000514834 PSMC4P43686 418 aa16.75■□□□□ 0.27
ITGA3-214ENST00000514834 HDAC1Q13547 482 aaPredicted RBP16.75■□□□□ 0.27
ITGA3-214ENST00000514834 ANKRD45Q5TZF3 282 aa16.75■□□□□ 0.27
ITGA3-214ENST00000514834 KBTBD3Q8NAB2 608 aa16.75■□□□□ 0.27
ITGA3-214ENST00000514834 PROCA1Q8NCQ7 364 aaPredicted RBP16.75■□□□□ 0.27
ITGA3-214ENST00000514834 DYNLL2Q96FJ2 89 aa16.75■□□□□ 0.27
ITGA3-214ENST00000514834 SLC45A1Q9Y2W3 748 aa16.75■□□□□ 0.27
ITGA3-214ENST00000514834 MGAMO43451 1857 aa16.75■□□□□ 0.27
ITGA3-214ENST00000514834 SALL3Q9BXA9 1300 aa16.74■□□□□ 0.27
ITGA3-214ENST00000514834 PEX10O60683 326 aa16.74■□□□□ 0.27
ITGA3-214ENST00000514834 BACE1P56817 501 aa16.74■□□□□ 0.27
ITGA3-214ENST00000514834 CERKLQ49MI3 558 aaPredicted RBP16.74■□□□□ 0.27
ITGA3-214ENST00000514834 OSBP2Q969R2 916 aa16.74■□□□□ 0.27
ITGA3-214ENST00000514834 GPATCH3Q96I76 525 aa16.74■□□□□ 0.27
ITGA3-214ENST00000514834 AS3MTQ9HBK9 375 aa16.74■□□□□ 0.27
ITGA3-214ENST00000514834 OSBPP22059 807 aa16.73■□□□□ 0.27
ITGA3-214ENST00000514834 MLLT1Q03111 559 aaPredicted RBP16.73■□□□□ 0.27
ITGA3-214ENST00000514834 KIF22Q14807 665 aa16.73■□□□□ 0.27
ITGA3-214ENST00000514834 ANKRD13CQ8N6S4 541 aa16.73■□□□□ 0.27
ITGA3-214ENST00000514834 ACER1Q8TDN7 264 aa16.73■□□□□ 0.27
ITGA3-214ENST00000514834 STRBPQ96SI9 672 aaKnown RBP16.73■□□□□ 0.27
ITGA3-214ENST00000514834 TBC1D2Q9BYX2 928 aa16.73■□□□□ 0.27
ITGA3-214ENST00000514834 ASCC2Q9H1I8 757 aaPredicted RBP16.73■□□□□ 0.27
ITGA3-214ENST00000514834 EMILIN3Q9NT22 766 aa16.73■□□□□ 0.27
ITGA3-214ENST00000514834 SLC4A4Q9Y6R1 1079 aa16.73■□□□□ 0.27
ITGA3-214ENST00000514834 DOCK3Q8IZD9 2030 aa16.72■□□□□ 0.27
ITGA3-214ENST00000514834 POTEFA5A3E0 1075 aa16.72■□□□□ 0.27
ITGA3-214ENST00000514834 USP17L10C9JJH3 530 aa16.72■□□□□ 0.27
ITGA3-214ENST00000514834 USP17L12C9JPN9 530 aa16.72■□□□□ 0.27
ITGA3-214ENST00000514834 USP17L21D6R901 530 aa16.72■□□□□ 0.27
ITGA3-214ENST00000514834 FMNL1O95466 1100 aaPredicted RBP16.72■□□□□ 0.27
ITGA3-214ENST00000514834 IGHDP01880 384 aa16.72■□□□□ 0.27
ITGA3-214ENST00000514834 NEFLP07196 543 aa16.72■□□□□ 0.27
ITGA3-214ENST00000514834 RAB3GAP1Q15042 981 aa16.72■□□□□ 0.27
ITGA3-214ENST00000514834 ZYXQ15942 572 aaKnown RBP16.72■□□□□ 0.27
ITGA3-214ENST00000514834 ABCB5Q2M3G0 1257 aa16.72■□□□□ 0.27
ITGA3-214ENST00000514834 POTEEQ6S8J3 1075 aa16.72■□□□□ 0.27
ITGA3-214ENST00000514834 SMCR8Q8TEV9 937 aaPredicted RBP16.72■□□□□ 0.27
ITGA3-214ENST00000514834 SH3TC2Q8TF17 1288 aa16.72■□□□□ 0.27
ITGA3-214ENST00000514834 ARMC5Q96C12 935 aa16.72■□□□□ 0.27
ITGA3-214ENST00000514834 ATP8A2Q9NTI2 1148 aa16.72■□□□□ 0.27
ITGA3-214ENST00000514834 GINM1Q9NU53 330 aa16.72■□□□□ 0.27
ITGA3-214ENST00000514834 GABRQQ9UN88 632 aa16.72■□□□□ 0.27
ITGA3-214ENST00000514834 TTC41PQ6P2S7 1318 aa16.71■□□□□ 0.27
ITGA3-214ENST00000514834 BRCA2P51587 3418 aa16.71■□□□□ 0.27
ITGA3-214ENST00000514834 M0R2C6 588 aa16.71■□□□□ 0.27
ITGA3-214ENST00000514834 RNF113AO15541 343 aaKnown RBP16.71■□□□□ 0.27
ITGA3-214ENST00000514834 MYCP01106 439 aaPredicted RBP16.71■□□□□ 0.27
ITGA3-214ENST00000514834 MX1P20591 662 aa16.71■□□□□ 0.27
ITGA3-214ENST00000514834 SEPT2Q15019 361 aa16.71■□□□□ 0.27
ITGA3-214ENST00000514834 ARHGEF6Q15052 776 aa16.71■□□□□ 0.27
ITGA3-214ENST00000514834 C12orf60Q5U649 245 aa16.71■□□□□ 0.27
ITGA3-214ENST00000514834 ZSCAN25Q6NSZ9 544 aa16.71■□□□□ 0.27
ITGA3-214ENST00000514834 SEC62Q99442 399 aaKnown RBP16.71■□□□□ 0.27
ITGA3-214ENST00000514834 P2RX7Q99572 595 aaKnown RBP16.71■□□□□ 0.27
ITGA3-214ENST00000514834 SRRDQ9UH36 339 aa16.71■□□□□ 0.27
ITGA3-214ENST00000514834 KIAA0100Q14667 2235 aaKnown RBP16.7■□□□□ 0.26
ITGA3-214ENST00000514834 GSG1L2A8MUP6 293 aa16.7■□□□□ 0.26
ITGA3-214ENST00000514834 C19orf81C9J6K1 198 aa16.7■□□□□ 0.26
ITGA3-214ENST00000514834 CTR9Q6PD62 1173 aa16.7■□□□□ 0.26
ITGA3-214ENST00000514834 CLEC10AQ8IUN9 316 aa16.7■□□□□ 0.26
ITGA3-214ENST00000514834 APPBP2Q92624 585 aa16.7■□□□□ 0.26
ITGA3-214ENST00000514834 GCC1Q96CN9 775 aa16.7■□□□□ 0.26
ITGA3-214ENST00000514834 ZNF333Q96JL9 665 aa16.7■□□□□ 0.26
ITGA3-214ENST00000514834 TMOD4Q9NZQ9 345 aa16.7■□□□□ 0.26
ITGA3-214ENST00000514834 MYH8P13535 1937 aa16.69■□□□□ 0.26
ITGA3-214ENST00000514834 A0A1W2PRG0 241 aa16.69■□□□□ 0.26
ITGA3-214ENST00000514834 GLRX3O76003 335 aaKnown RBP16.69■□□□□ 0.26
ITGA3-214ENST00000514834 AKR1B1P15121 316 aa16.69■□□□□ 0.26
ITGA3-214ENST00000514834 HOXA7P31268 230 aaPredicted RBP16.69■□□□□ 0.26
ITGA3-214ENST00000514834 PRKCZQ05513 592 aa16.69■□□□□ 0.26
ITGA3-214ENST00000514834 SLC9C1Q4G0N8 1177 aa16.69■□□□□ 0.26
ITGA3-214ENST00000514834 SIAH1Q8IUQ4 282 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms