RNA–Protein interactions for RNA: ENST00000514831.1

SMAD1-214, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-214ENST00000514831 HERVK_113P62684 666 aa28.04■■■□□ 2.08
SMAD1-214ENST00000514831 JAG1P78504 1218 aa28.04■■■□□ 2.08
SMAD1-214ENST00000514831 TTC39AQ5SRH9 613 aa28.04■■■□□ 2.08
SMAD1-214ENST00000514831 ADGRA1Q86SQ6 560 aa28.04■■■□□ 2.08
SMAD1-214ENST00000514831 MAPKAPK5Q8IW41 473 aa28.04■■■□□ 2.08
SMAD1-214ENST00000514831 LRCH3Q96II8 777 aa28.04■■■□□ 2.08
SMAD1-214ENST00000514831 TXNRD2Q9NNW7 524 aa28.04■■■□□ 2.08
SMAD1-214ENST00000514831 SNRKQ9NRH2 765 aa28.04■■■□□ 2.08
SMAD1-214ENST00000514831 OGDHLQ9ULD0 1010 aa28.04■■■□□ 2.08
SMAD1-214ENST00000514831 IGSF3O75054 1194 aa28.03■■■□□ 2.08
SMAD1-214ENST00000514831 XRCC5P13010 732 aaKnown RBP28.03■■■□□ 2.08
SMAD1-214ENST00000514831 TNNI3KQ59H18 835 aa28.03■■■□□ 2.08
SMAD1-214ENST00000514831 FOXP4Q8IVH2 680 aaPredicted RBP28.03■■■□□ 2.08
SMAD1-214ENST00000514831 CRACR2BQ8N4Y2 399 aaPredicted RBP28.03■■■□□ 2.08
SMAD1-214ENST00000514831 GPRC5AQ8NFJ5 357 aa28.03■■■□□ 2.08
SMAD1-214ENST00000514831 P2RX7Q99572 595 aaKnown RBP28.03■■■□□ 2.08
SMAD1-214ENST00000514831 NUDT12Q9BQG2 462 aa28.03■■■□□ 2.08
SMAD1-214ENST00000514831 FPGT-TNNI3KV9GXZ4 949 aa28.03■■■□□ 2.08
SMAD1-214ENST00000514831 MYH1P12882 1939 aa28.02■■■□□ 2.08
SMAD1-214ENST00000514831 USP17L10C9JJH3 530 aa28.02■■■□□ 2.08
SMAD1-214ENST00000514831 CYP2B6P20813 491 aa28.02■■■□□ 2.08
SMAD1-214ENST00000514831 CCDC158Q5M9N0 1113 aa28.02■■■□□ 2.08
SMAD1-214ENST00000514831 DBNDD2Q9BQY9 259 aa28.02■■■□□ 2.08
SMAD1-214ENST00000514831 TRIM34Q9BYJ4 488 aa28.02■■■□□ 2.08
SMAD1-214ENST00000514831 C11orf49Q9H6J7 331 aa28.02■■■□□ 2.08
SMAD1-214ENST00000514831 ZBTB21Q9ULJ3 1066 aa28.02■■■□□ 2.08
SMAD1-214ENST00000514831 CYP2E1P05181 493 aaPredicted RBP28.01■■■□□ 2.07
SMAD1-214ENST00000514831 PRKAR2AP13861 404 aaKnown RBP28.01■■■□□ 2.07
SMAD1-214ENST00000514831 POLA2Q14181 598 aa28.01■■■□□ 2.07
SMAD1-214ENST00000514831 SHROOM1Q2M3G4 852 aaPredicted RBP28.01■■■□□ 2.07
SMAD1-214ENST00000514831 ZNF512BQ96KM6 892 aaPredicted RBP28.01■■■□□ 2.07
SMAD1-214ENST00000514831 PALD1Q9ULE6 856 aa28.01■■■□□ 2.07
SMAD1-214ENST00000514831 ZMYND8Q9ULU4 1186 aaPredicted RBP28.01■■■□□ 2.07
SMAD1-214ENST00000514831 FRMPD3Q5JV73 1810 aa28.01■■■□□ 2.07
SMAD1-214ENST00000514831 PEX10O60683 326 aa28■■■□□ 2.07
SMAD1-214ENST00000514831 GDF11O95390 407 aa28■■■□□ 2.07
SMAD1-214ENST00000514831 MAPK4P31152 587 aa28■■■□□ 2.07
SMAD1-214ENST00000514831 TRMT44Q8IYL2 757 aaKnown RBP28■■■□□ 2.07
SMAD1-214ENST00000514831 GTF3C2Q8WUA4 911 aaPredicted RBP28■■■□□ 2.07
SMAD1-214ENST00000514831 FRAT1Q92837 279 aaPredicted RBP28■■■□□ 2.07
SMAD1-214ENST00000514831 PDE3AQ14432 1141 aa27.99■■■□□ 2.07
SMAD1-214ENST00000514831 CLUAP1Q96AJ1 413 aa27.99■■■□□ 2.07
SMAD1-214ENST00000514831 RBPJLQ9UBG7 517 aa27.99■■■□□ 2.07
SMAD1-214ENST00000514831 PFASO15067 1338 aa27.98■■■□□ 2.07
SMAD1-214ENST00000514831 BCAR3O75815 825 aa27.98■■■□□ 2.07
SMAD1-214ENST00000514831 HLA-DOAP06340 250 aa27.98■■■□□ 2.07
SMAD1-214ENST00000514831 ERVK-9P63128 1117 aa27.98■■■□□ 2.07
SMAD1-214ENST00000514831 ERVK-24P63145 666 aa27.98■■■□□ 2.07
SMAD1-214ENST00000514831 GPR153Q6NV75 609 aa27.98■■■□□ 2.07
SMAD1-214ENST00000514831 SSH3Q8TE77 659 aa27.98■■■□□ 2.07
SMAD1-214ENST00000514831 USP6NLQ92738 828 aa27.98■■■□□ 2.07
SMAD1-214ENST00000514831 ZKSCAN1P17029 563 aaPredicted RBP27.97■■■□□ 2.07
SMAD1-214ENST00000514831 OS9Q13438 667 aaPredicted RBP27.97■■■□□ 2.07
SMAD1-214ENST00000514831 ZAP70P43403 619 aa27.96■■■□□ 2.07
SMAD1-214ENST00000514831 GPR142Q7Z601 462 aa27.96■■■□□ 2.07
SMAD1-214ENST00000514831 TMEM57Q8N5G2 664 aa27.96■■■□□ 2.07
SMAD1-214ENST00000514831 SLC17A8Q8NDX2 589 aa27.96■■■□□ 2.07
SMAD1-214ENST00000514831 PORCNQ9H237 461 aa27.96■■■□□ 2.07
SMAD1-214ENST00000514831 PIH1D3Q9NQM4 214 aaKnown RBP27.96■■■□□ 2.07
SMAD1-214ENST00000514831 EMILIN3Q9NT22 766 aa27.96■■■□□ 2.07
SMAD1-214ENST00000514831 SAP30BPQ9UHR5 308 aaKnown RBP27.96■■■□□ 2.07
SMAD1-214ENST00000514831 SYN1P17600 705 aa27.95■■■□□ 2.06
SMAD1-214ENST00000514831 RGS2P41220 211 aa27.95■■■□□ 2.06
SMAD1-214ENST00000514831 CACNB2Q08289 660 aaPredicted RBP27.95■■■□□ 2.06
SMAD1-214ENST00000514831 Q3C1V9 767 aa27.95■■■□□ 2.06
SMAD1-214ENST00000514831 MORN1Q5T089 497 aa27.95■■■□□ 2.06
SMAD1-214ENST00000514831 USP17L2Q6R6M4 530 aa27.95■■■□□ 2.06
SMAD1-214ENST00000514831 APBA2Q99767 749 aa27.95■■■□□ 2.06
SMAD1-214ENST00000514831 CCER2I3L3R5 266 aa27.94■■■□□ 2.06
SMAD1-214ENST00000514831 COL6A1P12109 1028 aa27.94■■■□□ 2.06
SMAD1-214ENST00000514831 MAGEA10P43363 369 aaPredicted RBP27.94■■■□□ 2.06
SMAD1-214ENST00000514831 POTEEQ6S8J3 1075 aa27.94■■■□□ 2.06
SMAD1-214ENST00000514831 CCAR1Q8IX12 1150 aaKnown RBP27.94■■■□□ 2.06
SMAD1-214ENST00000514831 C12orf42Q96LP6 360 aa27.94■■■□□ 2.06
SMAD1-214ENST00000514831 PAGR1Q9BTK6 254 aa27.94■■■□□ 2.06
SMAD1-214ENST00000514831 DYNLL1P63167 89 aaKnown RBP27.93■■■□□ 2.06
SMAD1-214ENST00000514831 ATP8B2P98198 1209 aa27.93■■■□□ 2.06
SMAD1-214ENST00000514831 LRIT3Q3SXY7 679 aa27.93■■■□□ 2.06
SMAD1-214ENST00000514831 PLEKHH3Q7Z736 793 aa27.93■■■□□ 2.06
SMAD1-214ENST00000514831 CERS3Q8IU89 383 aa27.93■■■□□ 2.06
SMAD1-214ENST00000514831 DBNLQ9UJU6 430 aaKnown RBP27.93■■■□□ 2.06
SMAD1-214ENST00000514831 SURF6O75683 361 aaKnown RBP27.92■■■□□ 2.06
SMAD1-214ENST00000514831 GH2P01242 217 aa27.92■■■□□ 2.06
SMAD1-214ENST00000514831 CYP7A1P22680 504 aa27.92■■■□□ 2.06
SMAD1-214ENST00000514831 CCL14Q16627 93 aa27.92■■■□□ 2.06
SMAD1-214ENST00000514831 TATDN1Q6P1N9 297 aa27.92■■■□□ 2.06
SMAD1-214ENST00000514831 TDHQ8IZJ6 230 aa27.92■■■□□ 2.06
SMAD1-214ENST00000514831 CCND3P30281 292 aaPredicted RBP27.91■■■□□ 2.06
SMAD1-214ENST00000514831 ZKSCAN2Q63HK3 967 aa27.91■■■□□ 2.06
SMAD1-214ENST00000514831 LHX8Q68G74 356 aa27.91■■■□□ 2.06
SMAD1-214ENST00000514831 EHD4Q9H223 541 aa27.91■■■□□ 2.06
SMAD1-214ENST00000514831 NOP58Q9Y2X3 529 aaKnown RBP27.91■■■□□ 2.06
SMAD1-214ENST00000514831 COL6A3P12111 3177 aa27.91■■■□□ 2.06
SMAD1-214ENST00000514831 TLR7Q9NYK1 1049 aaKnown RBP27.9■■■□□ 2.06
SMAD1-214ENST00000514831 RABGAP1Q9Y3P9 1069 aa27.9■■■□□ 2.06
SMAD1-214ENST00000514831 NAV1Q8NEY1 1877 aa27.89■■■□□ 2.06
SMAD1-214ENST00000514831 IDH1O75874 414 aaKnown RBP27.89■■■□□ 2.06
SMAD1-214ENST00000514831 MAP2K5Q13163 448 aa27.89■■■□□ 2.06
SMAD1-214ENST00000514831 FEZ1Q99689 392 aa27.89■■■□□ 2.06
SMAD1-214ENST00000514831 SERPINB13Q9UIV8 391 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms