RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 IFNL1Q8IU54 200 aa16.7■□□□□ 0.26
USP46-209ENST00000514536 BRI3BPQ8WY22 251 aa16.7■□□□□ 0.26
USP46-209ENST00000514536 EPB41L4AQ9HCS5 686 aaPredicted RBP16.7■□□□□ 0.26
USP46-209ENST00000514536 DIAPH3Q9NSV4 1193 aa16.7■□□□□ 0.26
USP46-209ENST00000514536 TESPA1A2RU30 521 aaPredicted RBP16.69■□□□□ 0.26
USP46-209ENST00000514536 MINDY4BA8MYZ0 360 aa16.69■□□□□ 0.26
USP46-209ENST00000514536 CA12O43570 354 aa16.69■□□□□ 0.26
USP46-209ENST00000514536 CETPP11597 493 aa16.69■□□□□ 0.26
USP46-209ENST00000514536 CERKLQ49MI3 558 aaPredicted RBP16.69■□□□□ 0.26
USP46-209ENST00000514536 SBK1Q52WX2 424 aa16.69■□□□□ 0.26
USP46-209ENST00000514536 CWC27Q6UX04 472 aaKnown RBP16.69■□□□□ 0.26
USP46-209ENST00000514536 SLC44A5Q8NCS7 719 aa16.69■□□□□ 0.26
USP46-209ENST00000514536 PTPN18Q99952 460 aa16.69■□□□□ 0.26
USP46-209ENST00000514536 NACAP1Q9BZK3 213 aa16.69■□□□□ 0.26
USP46-209ENST00000514536 ARPP21Q9UBL0 812 aaPredicted RBP16.69■□□□□ 0.26
USP46-209ENST00000514536 KCNH4Q9UQ05 1017 aa16.69■□□□□ 0.26
USP46-209ENST00000514536 AFG3L2Q9Y4W6 797 aa16.69■□□□□ 0.26
USP46-209ENST00000514536 MYH1P12882 1939 aa16.69■□□□□ 0.26
USP46-209ENST00000514536 USP17L5A8MUK1 530 aa16.68■□□□□ 0.26
USP46-209ENST00000514536 HIP1O00291 1037 aa16.68■□□□□ 0.26
USP46-209ENST00000514536 IGF2BP3O00425 579 aaKnown RBP eCLIP16.68■□□□□ 0.26
USP46-209ENST00000514536 ASNSP08243 561 aa16.68■□□□□ 0.26
USP46-209ENST00000514536 VPS53Q5VIR6 699 aa16.68■□□□□ 0.26
USP46-209ENST00000514536 STK11IPQ8N1F8 1099 aa16.68■□□□□ 0.26
USP46-209ENST00000514536 SIPA1L1O43166 1804 aa16.68■□□□□ 0.26
USP46-209ENST00000514536 CXCL11O14625 94 aa16.68■□□□□ 0.26
USP46-209ENST00000514536 GH2P01242 217 aa16.68■□□□□ 0.26
USP46-209ENST00000514536 OTUD7BQ6GQQ9 843 aa16.68■□□□□ 0.26
USP46-209ENST00000514536 ZNF589Q86UQ0 364 aaPredicted RBP16.68■□□□□ 0.26
USP46-209ENST00000514536 NAPBQ9H115 298 aa16.68■□□□□ 0.26
USP46-209ENST00000514536 SAGE1Q9NXZ1 904 aa16.68■□□□□ 0.26
USP46-209ENST00000514536 SWAP70Q9UH65 585 aa16.68■□□□□ 0.26
USP46-209ENST00000514536 TRIM75PA6NK02 468 aa16.67■□□□□ 0.26
USP46-209ENST00000514536 FOXP2O15409 715 aa16.67■□□□□ 0.26
USP46-209ENST00000514536 TBC1D8O95759 1140 aa16.67■□□□□ 0.26
USP46-209ENST00000514536 CDK8P49336 464 aa16.67■□□□□ 0.26
USP46-209ENST00000514536 SPP2Q13103 211 aa16.67■□□□□ 0.26
USP46-209ENST00000514536 ABCB5Q2M3G0 1257 aa16.67■□□□□ 0.26
USP46-209ENST00000514536 CABP5Q9NP86 173 aa16.67■□□□□ 0.26
USP46-209ENST00000514536 GINM1Q9NU53 330 aa16.67■□□□□ 0.26
USP46-209ENST00000514536 ZBTB21Q9ULJ3 1066 aa16.67■□□□□ 0.26
USP46-209ENST00000514536 CCDC171Q6TFL3 1326 aa16.66■□□□□ 0.26
USP46-209ENST00000514536 ALDH1A1P00352 501 aa16.66■□□□□ 0.26
USP46-209ENST00000514536 C16orf86Q6ZW13 317 aa16.66■□□□□ 0.26
USP46-209ENST00000514536 ZNF280CQ8ND82 737 aa16.66■□□□□ 0.26
USP46-209ENST00000514536 AS3MTQ9HBK9 375 aa16.66■□□□□ 0.26
USP46-209ENST00000514536 TAOK2Q9UL54 1235 aa16.66■□□□□ 0.26
USP46-209ENST00000514536 NAV1Q8NEY1 1877 aa16.66■□□□□ 0.26
USP46-209ENST00000514536 BTBD19C9JJ37 291 aa16.65■□□□□ 0.26
USP46-209ENST00000514536 MPHOSPH10O00566 681 aaKnown RBP16.65■□□□□ 0.26
USP46-209ENST00000514536 HSPD1P10809 573 aaKnown RBP16.65■□□□□ 0.26
USP46-209ENST00000514536 MFAP1P55081 439 aaKnown RBP16.65■□□□□ 0.26
USP46-209ENST00000514536 RAB3GAP1Q15042 981 aa16.65■□□□□ 0.26
USP46-209ENST00000514536 FAM43AQ8N2R8 423 aa16.65■□□□□ 0.26
USP46-209ENST00000514536 TBC1D2Q9BYX2 928 aa16.65■□□□□ 0.26
USP46-209ENST00000514536 DDX60LQ5H9U9 1706 aaKnown RBP16.65■□□□□ 0.26
USP46-209ENST00000514536 A0A0G2JLL6 359 aaPredicted RBP16.64■□□□□ 0.25
USP46-209ENST00000514536 CHMLP26374 656 aa16.64■□□□□ 0.25
USP46-209ENST00000514536 MOGSQ13724 837 aa16.64■□□□□ 0.25
USP46-209ENST00000514536 ALX1Q15699 326 aa16.64■□□□□ 0.25
USP46-209ENST00000514536 PRRT2Q7Z6L0 340 aaPredicted RBP16.64■□□□□ 0.25
USP46-209ENST00000514536 WDR18Q9BV38 432 aa16.64■□□□□ 0.25
USP46-209ENST00000514536 R3HDMLQ9H3Y0 253 aa16.64■□□□□ 0.25
USP46-209ENST00000514536 BAZ2AQ9UIF9 1905 aaKnown RBP16.64■□□□□ 0.25
USP46-209ENST00000514536 FGAP02671 866 aa16.64■□□□□ 0.25
USP46-209ENST00000514536 AKR1B1P15121 316 aa16.64■□□□□ 0.25
USP46-209ENST00000514536 GUCY1A2P33402 732 aa16.64■□□□□ 0.25
USP46-209ENST00000514536 PPARAQ07869 468 aa16.64■□□□□ 0.25
USP46-209ENST00000514536 SEPT2Q15019 361 aa16.64■□□□□ 0.25
USP46-209ENST00000514536 GADL1Q6ZQY3 521 aa16.64■□□□□ 0.25
USP46-209ENST00000514536 MKNK2Q9HBH9 465 aa16.64■□□□□ 0.25
USP46-209ENST00000514536 FASTKD5Q7L8L6 764 aaKnown RBP16.63■□□□□ 0.25
USP46-209ENST00000514536 CCDC17Q96LX7 622 aa16.63■□□□□ 0.25
USP46-209ENST00000514536 IL25Q9H293 177 aa16.63■□□□□ 0.25
USP46-209ENST00000514536 USP17L10C9JJH3 530 aa16.62■□□□□ 0.25
USP46-209ENST00000514536 PDHXO00330 501 aa16.62■□□□□ 0.25
USP46-209ENST00000514536 PRDM1O75626 825 aa16.62■□□□□ 0.25
USP46-209ENST00000514536 HMGCS2P54868 508 aa16.62■□□□□ 0.25
USP46-209ENST00000514536 MTMR2Q13614 643 aa16.62■□□□□ 0.25
USP46-209ENST00000514536 TAF1CQ15572 869 aaPredicted RBP16.62■□□□□ 0.25
USP46-209ENST00000514536 GPAT2Q6NUI2 795 aa16.62■□□□□ 0.25
USP46-209ENST00000514536 ANKRD23Q86SG2 305 aa16.62■□□□□ 0.25
USP46-209ENST00000514536 RUFY2Q8WXA3 655 aa16.62■□□□□ 0.25
USP46-209ENST00000514536 ABHD8Q96I13 439 aa16.62■□□□□ 0.25
USP46-209ENST00000514536 DOCK1Q14185 1865 aa16.62■□□□□ 0.25
USP46-209ENST00000514536 SLC3A2P08195 630 aaKnown RBP16.61■□□□□ 0.25
USP46-209ENST00000514536 RASA1P20936 1047 aa16.61■□□□□ 0.25
USP46-209ENST00000514536 BACE1P56817 501 aa16.61■□□□□ 0.25
USP46-209ENST00000514536 CTDSPL2Q05D32 466 aa16.61■□□□□ 0.25
USP46-209ENST00000514536 CRHR2Q13324 411 aa16.61■□□□□ 0.25
USP46-209ENST00000514536 BMP2KLQ5H9B9 411 aa16.61■□□□□ 0.25
USP46-209ENST00000514536 TMEM179Q6ZVK1 233 aa16.61■□□□□ 0.25
USP46-209ENST00000514536 CFHR5Q9BXR6 569 aa16.61■□□□□ 0.25
USP46-209ENST00000514536 ROBO3Q96MS0 1386 aa16.6■□□□□ 0.25
USP46-209ENST00000514536 C19orf81C9J6K1 198 aa16.6■□□□□ 0.25
USP46-209ENST00000514536 DGKZQ13574 1117 aa16.6■□□□□ 0.25
USP46-209ENST00000514536 SH3D19Q5HYK7 790 aa16.6■□□□□ 0.25
USP46-209ENST00000514536 ZNF444Q8N0Y2 327 aaPredicted RBP16.6■□□□□ 0.25
USP46-209ENST00000514536 ACER1Q8TDN7 264 aa16.6■□□□□ 0.25
USP46-209ENST00000514536 ZNF287Q9HBT7 754 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms