RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-223ENST00000514267 SLC6A19Q695T7 634 aa5.36□□□□□ -1.55
CALCOCO2-223ENST00000514267 THAP5Q7Z6K1 395 aa5.36□□□□□ -1.55
CALCOCO2-223ENST00000514267 RELL1Q8IUW5 271 aa5.36□□□□□ -1.55
CALCOCO2-223ENST00000514267 MRPL41Q8IXM3 137 aaKnown RBP5.36□□□□□ -1.55
CALCOCO2-223ENST00000514267 PLD6Q8N2A8 252 aaKnown RBP5.36□□□□□ -1.55
CALCOCO2-223ENST00000514267 RSRP1Q9BUV0 290 aa5.36□□□□□ -1.55
CALCOCO2-223ENST00000514267 METTL5Q9NRN9 209 aaKnown RBP5.36□□□□□ -1.55
CALCOCO2-223ENST00000514267 LMCD1Q9NZU5 365 aa5.36□□□□□ -1.55
CALCOCO2-223ENST00000514267 CSADQ9Y600 493 aa5.36□□□□□ -1.55
CALCOCO2-223ENST00000514267 FAM155AB1AL88 458 aaPredicted RBP5.35□□□□□ -1.55
CALCOCO2-223ENST00000514267 GFRA2O00451 464 aa5.35□□□□□ -1.55
CALCOCO2-223ENST00000514267 ZNF865P0CJ78 1059 aaPredicted RBP5.35□□□□□ -1.55
CALCOCO2-223ENST00000514267 ITGB5P18084 799 aa5.35□□□□□ -1.55
CALCOCO2-223ENST00000514267 INPP5AQ14642 412 aa5.35□□□□□ -1.55
CALCOCO2-223ENST00000514267 AOC3Q16853 763 aa5.35□□□□□ -1.55
CALCOCO2-223ENST00000514267 RASIP1Q5U651 963 aa5.35□□□□□ -1.55
CALCOCO2-223ENST00000514267 SLC23A3Q6PIS1 610 aa5.35□□□□□ -1.55
CALCOCO2-223ENST00000514267 ATG4DQ86TL0 474 aaPredicted RBP5.35□□□□□ -1.55
CALCOCO2-223ENST00000514267 MFSD4AQ8N468 514 aa5.35□□□□□ -1.55
CALCOCO2-223ENST00000514267 FAM181AQ8N9Y4 354 aa5.35□□□□□ -1.55
CALCOCO2-223ENST00000514267 PI4K2BQ8TCG2 481 aa5.35□□□□□ -1.55
CALCOCO2-223ENST00000514267 SREK1Q8WXA9 508 aaKnown RBP5.35□□□□□ -1.55
CALCOCO2-223ENST00000514267 DRC1Q96MC2 740 aa5.35□□□□□ -1.55
CALCOCO2-223ENST00000514267 KRTAP4-8Q9BYQ9 185 aa5.35□□□□□ -1.55
CALCOCO2-223ENST00000514267 ROBO2Q9HCK4 1378 aa5.34□□□□□ -1.55
CALCOCO2-223ENST00000514267 PGRP06401 933 aa5.34□□□□□ -1.55
CALCOCO2-223ENST00000514267 ITIH2P19823 946 aa5.34□□□□□ -1.55
CALCOCO2-223ENST00000514267 GRK4P32298 578 aa5.34□□□□□ -1.55
CALCOCO2-223ENST00000514267 SEPT6Q14141 434 aa5.34□□□□□ -1.55
CALCOCO2-223ENST00000514267 SLBPQ14493 270 aaKnown RBP eCLIP5.34□□□□□ -1.55
CALCOCO2-223ENST00000514267 MEI1Q5TIA1 1274 aa5.34□□□□□ -1.55
CALCOCO2-223ENST00000514267 LETMD1Q6P1Q0 360 aa5.34□□□□□ -1.55
CALCOCO2-223ENST00000514267 MPRIPQ6WCQ1 1025 aa5.34□□□□□ -1.55
CALCOCO2-223ENST00000514267 PHC3Q8NDX5 983 aa5.34□□□□□ -1.55
CALCOCO2-223ENST00000514267 PIWIL2Q8TC59 973 aaKnown RBP5.34□□□□□ -1.55
CALCOCO2-223ENST00000514267 TMEM74Q96NL1 305 aa5.34□□□□□ -1.55
CALCOCO2-223ENST00000514267 MIPEPQ99797 713 aa5.34□□□□□ -1.55
CALCOCO2-223ENST00000514267 RNF114Q9Y508 228 aa5.34□□□□□ -1.55
CALCOCO2-223ENST00000514267 TFE3P19532 575 aaPredicted RBP5.33□□□□□ -1.56
CALCOCO2-223ENST00000514267 ERCC5P28715 1186 aaPredicted RBP5.33□□□□□ -1.56
CALCOCO2-223ENST00000514267 IKZF1Q13422 519 aa5.33□□□□□ -1.56
CALCOCO2-223ENST00000514267 SF3A1Q15459 793 aaKnown RBP5.33□□□□□ -1.56
CALCOCO2-223ENST00000514267 MAP3K11Q16584 847 aa5.33□□□□□ -1.56
CALCOCO2-223ENST00000514267 ZNF792Q3KQV3 632 aa5.33□□□□□ -1.56
CALCOCO2-223ENST00000514267 LDLRAD1Q5T700 205 aa5.33□□□□□ -1.56
CALCOCO2-223ENST00000514267 FAM214BQ7L5A3 538 aa5.33□□□□□ -1.56
CALCOCO2-223ENST00000514267 MCATQ8IVS2 390 aaKnown RBP5.33□□□□□ -1.56
CALCOCO2-223ENST00000514267 SPACA3Q8IXA5 215 aa5.33□□□□□ -1.56
CALCOCO2-223ENST00000514267 GATAD2BQ8WXI9 593 aa5.33□□□□□ -1.56
CALCOCO2-223ENST00000514267 HEXIM2Q96MH2 286 aaKnown RBP5.33□□□□□ -1.56
CALCOCO2-223ENST00000514267 CILPO75339 1184 aa5.32□□□□□ -1.56
CALCOCO2-223ENST00000514267 SLITRK5O94991 958 aa5.32□□□□□ -1.56
CALCOCO2-223ENST00000514267 EOMESO95936 686 aa5.32□□□□□ -1.56
CALCOCO2-223ENST00000514267 CHMP4BP1P59074 171 aa5.32□□□□□ -1.56
CALCOCO2-223ENST00000514267 HDLBPQ00341 1268 aaKnown RBP5.32□□□□□ -1.56
CALCOCO2-223ENST00000514267 PTPN11Q06124 597 aaPredicted RBP5.32□□□□□ -1.56
CALCOCO2-223ENST00000514267 CAMK2GQ13555 558 aaPredicted RBP5.32□□□□□ -1.56
CALCOCO2-223ENST00000514267 MPP2Q14168 576 aa5.32□□□□□ -1.56
CALCOCO2-223ENST00000514267 NAALADL2Q58DX5 795 aa5.32□□□□□ -1.56
CALCOCO2-223ENST00000514267 TMEM201Q5SNT2 666 aa5.32□□□□□ -1.56
CALCOCO2-223ENST00000514267 SNAP47Q5SQN1 464 aa5.32□□□□□ -1.56
CALCOCO2-223ENST00000514267 PRAMEF13Q5VWM6 474 aa5.32□□□□□ -1.56
CALCOCO2-223ENST00000514267 NFXL1Q6ZNB6 911 aa5.32□□□□□ -1.56
CALCOCO2-223ENST00000514267 TMPRSS7Q7RTY8 843 aa5.32□□□□□ -1.56
CALCOCO2-223ENST00000514267 TMEM87AQ8NBN3 555 aa5.32□□□□□ -1.56
CALCOCO2-223ENST00000514267 CYB5D2Q8WUJ1 264 aa5.32□□□□□ -1.56
CALCOCO2-223ENST00000514267 TMEM87BQ96K49 555 aa5.32□□□□□ -1.56
CALCOCO2-223ENST00000514267 TRIT1Q9H3H1 467 aaKnown RBP5.32□□□□□ -1.56
CALCOCO2-223ENST00000514267 RC3H2Q9HBD1 1191 aaKnown RBP5.32□□□□□ -1.56
CALCOCO2-223ENST00000514267 KCNH3Q9ULD8 1083 aa5.32□□□□□ -1.56
CALCOCO2-223ENST00000514267 PITPNM2Q9BZ72 1349 aa5.31□□□□□ -1.56
CALCOCO2-223ENST00000514267 CTSHP09668 335 aa5.31□□□□□ -1.56
CALCOCO2-223ENST00000514267 CD8BP10966 210 aa5.31□□□□□ -1.56
CALCOCO2-223ENST00000514267 YBX3P16989 372 aaKnown RBP eCLIP5.31□□□□□ -1.56
CALCOCO2-223ENST00000514267 GBP2P32456 591 aaPredicted RBP5.31□□□□□ -1.56
CALCOCO2-223ENST00000514267 CWF19L2Q2TBE0 894 aaKnown RBP5.31□□□□□ -1.56
CALCOCO2-223ENST00000514267 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.31□□□□□ -1.56
CALCOCO2-223ENST00000514267 HS2ST1Q7LGA3 356 aa5.31□□□□□ -1.56
CALCOCO2-223ENST00000514267 FLAD1Q8NFF5 587 aa5.31□□□□□ -1.56
CALCOCO2-223ENST00000514267 RHOVQ96L33 236 aa5.31□□□□□ -1.56
CALCOCO2-223ENST00000514267 FBRSQ9HAH7 460 aa5.31□□□□□ -1.56
CALCOCO2-223ENST00000514267 PLAGL2Q9UPG8 496 aa5.31□□□□□ -1.56
CALCOCO2-223ENST00000514267 PCDHB5Q9Y5E4 795 aa5.31□□□□□ -1.56
CALCOCO2-223ENST00000514267 PRR36Q9H6K5 1346 aa5.3□□□□□ -1.56
CALCOCO2-223ENST00000514267 PLCG1P19174 1290 aa5.3□□□□□ -1.56
CALCOCO2-223ENST00000514267 NKPD1Q17RQ9 610 aa5.3□□□□□ -1.56
CALCOCO2-223ENST00000514267 ERMP1Q7Z2K6 904 aa5.3□□□□□ -1.56
CALCOCO2-223ENST00000514267 SPRED2Q7Z698 418 aa5.3□□□□□ -1.56
CALCOCO2-223ENST00000514267 METTL16Q86W50 562 aaKnown RBP5.3□□□□□ -1.56
CALCOCO2-223ENST00000514267 SLFN12Q8IYM2 578 aa5.3□□□□□ -1.56
CALCOCO2-223ENST00000514267 JARID2Q92833 1246 aaPredicted RBP5.3□□□□□ -1.56
CALCOCO2-223ENST00000514267 RNF34Q969K3 372 aa5.3□□□□□ -1.56
CALCOCO2-223ENST00000514267 LRRC3Q9BY71 257 aa5.3□□□□□ -1.56
CALCOCO2-223ENST00000514267 TGIF2Q9GZN2 237 aa5.3□□□□□ -1.56
CALCOCO2-223ENST00000514267 FAM53CQ9NYF3 392 aa5.3□□□□□ -1.56
CALCOCO2-223ENST00000514267 TJP2Q9UDY2 1190 aa5.3□□□□□ -1.56
CALCOCO2-223ENST00000514267 SUPT16HQ9Y5B9 1047 aaKnown RBP5.3□□□□□ -1.56
CALCOCO2-223ENST00000514267 ZNF76P36508 570 aa5.29□□□□□ -1.56
CALCOCO2-223ENST00000514267 AFMP43652 599 aa5.29□□□□□ -1.56
CALCOCO2-223ENST00000514267 FANCCQ00597 558 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms