RNA–Protein interactions for RNA: ENST00000514231.1

PDE4D-221, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-221ENST00000514231 PGRP06401 933 aa9.18□□□□□ -0.94
PDE4D-221ENST00000514231 MRPL58Q14197 206 aaKnown RBP9.18□□□□□ -0.94
PDE4D-221ENST00000514231 AOC3Q16853 763 aa9.18□□□□□ -0.94
PDE4D-221ENST00000514231 BNC2Q6ZN30 1099 aaPredicted RBP9.18□□□□□ -0.94
PDE4D-221ENST00000514231 TJP2Q9UDY2 1190 aa9.18□□□□□ -0.94
PDE4D-221ENST00000514231 CD8BP10966 210 aa9.17□□□□□ -0.94
PDE4D-221ENST00000514231 ITIH2P19823 946 aa9.17□□□□□ -0.94
PDE4D-221ENST00000514231 PRAMEF13Q5VWM6 474 aa9.17□□□□□ -0.94
PDE4D-221ENST00000514231 ZNF574Q6ZN55 896 aaPredicted RBP9.17□□□□□ -0.94
PDE4D-221ENST00000514231 MCATQ8IVS2 390 aaKnown RBP9.17□□□□□ -0.94
PDE4D-221ENST00000514231 RIN3Q8TB24 985 aa9.17□□□□□ -0.94
PDE4D-221ENST00000514231 MIPEPQ99797 713 aa9.17□□□□□ -0.94
PDE4D-221ENST00000514231 GNAT3A8MTJ3 354 aa9.16□□□□□ -0.94
PDE4D-221ENST00000514231 F6X3S4 739 aa9.16□□□□□ -0.94
PDE4D-221ENST00000514231 BPNT1O95861 308 aa9.16□□□□□ -0.94
PDE4D-221ENST00000514231 F13A1P00488 732 aa9.16□□□□□ -0.94
PDE4D-221ENST00000514231 NKPD1Q17RQ9 610 aa9.16□□□□□ -0.94
PDE4D-221ENST00000514231 ZNF746Q6NUN9 644 aaPredicted RBP9.16□□□□□ -0.94
PDE4D-221ENST00000514231 LETMD1Q6P1Q0 360 aa9.16□□□□□ -0.94
PDE4D-221ENST00000514231 C22orf34Q6ZV56 151 aa9.16□□□□□ -0.94
PDE4D-221ENST00000514231 ERMP1Q7Z2K6 904 aa9.16□□□□□ -0.94
PDE4D-221ENST00000514231 ASB11Q8WXH4 323 aa9.16□□□□□ -0.94
PDE4D-221ENST00000514231 TMEM87BQ96K49 555 aa9.16□□□□□ -0.94
PDE4D-221ENST00000514231 MINDY4BA8MYZ0 360 aa9.15□□□□□ -0.94
PDE4D-221ENST00000514231 FUT4P22083 530 aa9.15□□□□□ -0.94
PDE4D-221ENST00000514231 SFRP5Q5T4F7 317 aa9.15□□□□□ -0.94
PDE4D-221ENST00000514231 SPACA3Q8IXA5 215 aa9.15□□□□□ -0.94
PDE4D-221ENST00000514231 COX4I2Q96KJ9 171 aa9.15□□□□□ -0.94
PDE4D-221ENST00000514231 TPX2Q9ULW0 747 aaKnown RBP9.15□□□□□ -0.94
PDE4D-221ENST00000514231 CNTNAP4Q9C0A0 1308 aa9.14□□□□□ -0.95
PDE4D-221ENST00000514231 PRR36Q9H6K5 1346 aa9.14□□□□□ -0.95
PDE4D-221ENST00000514231 PAX4O43316 350 aa9.14□□□□□ -0.95
PDE4D-221ENST00000514231 ZNF865P0CJ78 1059 aaPredicted RBP9.14□□□□□ -0.95
PDE4D-221ENST00000514231 ZNF16P17020 682 aaPredicted RBP9.14□□□□□ -0.95
PDE4D-221ENST00000514231 PLCL1Q15111 1095 aa9.14□□□□□ -0.95
PDE4D-221ENST00000514231 ACSF2Q96CM8 615 aaPredicted RBP9.14□□□□□ -0.95
PDE4D-221ENST00000514231 CYP7A1P22680 504 aa9.13□□□□□ -0.95
PDE4D-221ENST00000514231 CLCN7P51798 805 aa9.13□□□□□ -0.95
PDE4D-221ENST00000514231 MFAP1P55081 439 aaKnown RBP9.13□□□□□ -0.95
PDE4D-221ENST00000514231 TMEM201Q5SNT2 666 aa9.13□□□□□ -0.95
PDE4D-221ENST00000514231 GOLM1Q8NBJ4 401 aa9.13□□□□□ -0.95
PDE4D-221ENST00000514231 XAGE3Q8WTP9 111 aa9.13□□□□□ -0.95
PDE4D-221ENST00000514231 KBTBD4Q9NVX7 518 aa9.13□□□□□ -0.95
PDE4D-221ENST00000514231 CORINQ9Y5Q5 1042 aa9.13□□□□□ -0.95
PDE4D-221ENST00000514231 ROBO2Q9HCK4 1378 aa9.12□□□□□ -0.95
PDE4D-221ENST00000514231 PLCG1P19174 1290 aa9.12□□□□□ -0.95
PDE4D-221ENST00000514231 GARTP22102 1010 aa9.12□□□□□ -0.95
PDE4D-221ENST00000514231 FAM160A1Q05DH4 1040 aa9.12□□□□□ -0.95
PDE4D-221ENST00000514231 MPP2Q14168 576 aa9.12□□□□□ -0.95
PDE4D-221ENST00000514231 KCNQ5Q9NR82 932 aa9.12□□□□□ -0.95
PDE4D-221ENST00000514231 CD96P40200 585 aa9.11□□□□□ -0.95
PDE4D-221ENST00000514231 ZNF792Q3KQV3 632 aa9.11□□□□□ -0.95
PDE4D-221ENST00000514231 SNAP47Q5SQN1 464 aa9.11□□□□□ -0.95
PDE4D-221ENST00000514231 ANGEL2Q5VTE6 544 aaKnown RBP9.11□□□□□ -0.95
PDE4D-221ENST00000514231 FAM196AQ6ZSG2 479 aa9.11□□□□□ -0.95
PDE4D-221ENST00000514231 CDH24Q86UP0 819 aa9.11□□□□□ -0.95
PDE4D-221ENST00000514231 KRTAP1-3Q8IUG1 177 aa9.11□□□□□ -0.95
PDE4D-221ENST00000514231 PI4K2BQ8TCG2 481 aa9.11□□□□□ -0.95
PDE4D-221ENST00000514231 COPRSQ9NQ92 184 aa9.11□□□□□ -0.95
PDE4D-221ENST00000514231 CEP131Q9UPN4 1083 aa9.11□□□□□ -0.95
PDE4D-221ENST00000514231 PRR33A8MZF0 331 aa9.1□□□□□ -0.95
PDE4D-221ENST00000514231 FAM155AB1AL88 458 aaPredicted RBP9.1□□□□□ -0.95
PDE4D-221ENST00000514231 GREM1O60565 184 aa9.1□□□□□ -0.95
PDE4D-221ENST00000514231 EIF4A3P38919 411 aaKnown RBP9.1□□□□□ -0.95
PDE4D-221ENST00000514231 KIR3DL1P43629 444 aa9.1□□□□□ -0.95
PDE4D-221ENST00000514231 FBXL19Q6PCT2 694 aa9.1□□□□□ -0.95
PDE4D-221ENST00000514231 HS2ST1Q7LGA3 356 aa9.1□□□□□ -0.95
PDE4D-221ENST00000514231 MFSD4AQ8N468 514 aa9.1□□□□□ -0.95
PDE4D-221ENST00000514231 DPH2Q9BQC3 489 aaPredicted RBP9.1□□□□□ -0.95
PDE4D-221ENST00000514231 CAPN6Q9Y6Q1 641 aa9.1□□□□□ -0.95
PDE4D-221ENST00000514231 JUNBP17275 347 aaPredicted RBP9.09□□□□□ -0.95
PDE4D-221ENST00000514231 ITGB5P18084 799 aa9.09□□□□□ -0.95
PDE4D-221ENST00000514231 ETV3P41162 512 aa9.09□□□□□ -0.95
PDE4D-221ENST00000514231 YARSP54577 528 aaKnown RBP9.09□□□□□ -0.95
PDE4D-221ENST00000514231 FMNL2Q96PY5 1086 aa9.09□□□□□ -0.95
PDE4D-221ENST00000514231 GGT7Q9UJ14 662 aa9.09□□□□□ -0.95
PDE4D-221ENST00000514231 POLR3KQ9Y2Y1 108 aaPredicted RBP9.09□□□□□ -0.95
PDE4D-221ENST00000514231 PITPNM2Q9BZ72 1349 aa9.08□□□□□ -0.96
PDE4D-221ENST00000514231 UPK3BL1B0FP48 263 aa9.08□□□□□ -0.96
PDE4D-221ENST00000514231 UPK3BL2E5RIL1 263 aa9.08□□□□□ -0.96
PDE4D-221ENST00000514231 CBX7O95931 251 aa9.08□□□□□ -0.96
PDE4D-221ENST00000514231 LDLRAD1Q5T700 205 aa9.08□□□□□ -0.96
PDE4D-221ENST00000514231 SLC23A3Q6PIS1 610 aa9.08□□□□□ -0.96
PDE4D-221ENST00000514231 REC114Q7Z4M0 266 aa9.08□□□□□ -0.96
PDE4D-221ENST00000514231 SLFN12Q8IYM2 578 aa9.08□□□□□ -0.96
PDE4D-221ENST00000514231 TMEM87AQ8NBN3 555 aa9.08□□□□□ -0.96
PDE4D-221ENST00000514231 HSPA12BQ96MM6 686 aa9.08□□□□□ -0.96
PDE4D-221ENST00000514231 SEMA3GQ9NS98 782 aa9.08□□□□□ -0.96
PDE4D-221ENST00000514231 MBNL3Q9NUK0 354 aaKnown RBP9.08□□□□□ -0.96
PDE4D-221ENST00000514231 LMCD1Q9NZU5 365 aa9.08□□□□□ -0.96
PDE4D-221ENST00000514231 SUPT16HQ9Y5B9 1047 aaKnown RBP9.08□□□□□ -0.96
PDE4D-221ENST00000514231 ST14Q9Y5Y6 855 aa9.08□□□□□ -0.96
PDE4D-221ENST00000514231 RBM47A0AV96 593 aaKnown RBP9.07□□□□□ -0.96
PDE4D-221ENST00000514231 RNASE1P07998 156 aaKnown RBP9.07□□□□□ -0.96
PDE4D-221ENST00000514231 IKZF1Q13422 519 aa9.07□□□□□ -0.96
PDE4D-221ENST00000514231 FAM13CQ8NE31 585 aa9.07□□□□□ -0.96
PDE4D-221ENST00000514231 DNAJB8Q8NHS0 232 aa9.07□□□□□ -0.96
PDE4D-221ENST00000514231 PPP1R13LQ8WUF5 828 aa9.07□□□□□ -0.96
PDE4D-221ENST00000514231 ZNF296Q8WUU4 475 aaPredicted RBP9.07□□□□□ -0.96
PDE4D-221ENST00000514231 LRRC3Q9BY71 257 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms