RNA–Protein interactions for RNA: ENST00000514131.1

CSNK1G3-208, Transcript of casein kinase 1 gamma 3, humanhuman

TSL 5

Gene CSNK1G3, Length 253 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-208ENST00000514131 MFSD2AQ8NA29 543 aa10.08□□□□□ -0.8
CSNK1G3-208ENST00000514131 RNF34Q969K3 372 aa10.08□□□□□ -0.8
CSNK1G3-208ENST00000514131 ACSF2Q96CM8 615 aaPredicted RBP10.08□□□□□ -0.8
CSNK1G3-208ENST00000514131 TMEM87BQ96K49 555 aa10.08□□□□□ -0.8
CSNK1G3-208ENST00000514131 MIPEPQ99797 713 aa10.08□□□□□ -0.8
CSNK1G3-208ENST00000514131 ADAM30Q9UKF2 790 aa10.08□□□□□ -0.8
CSNK1G3-208ENST00000514131 SCAMP3O14828 347 aaKnown RBP10.07□□□□□ -0.8
CSNK1G3-208ENST00000514131 ZNF394Q53GI3 561 aa10.07□□□□□ -0.8
CSNK1G3-208ENST00000514131 REC114Q7Z4M0 266 aa10.07□□□□□ -0.8
CSNK1G3-208ENST00000514131 MCATQ8IVS2 390 aaKnown RBP10.07□□□□□ -0.8
CSNK1G3-208ENST00000514131 PLD6Q8N2A8 252 aaKnown RBP10.07□□□□□ -0.8
CSNK1G3-208ENST00000514131 RIN3Q8TB24 985 aa10.07□□□□□ -0.8
CSNK1G3-208ENST00000514131 BSDC1Q9NW68 430 aaPredicted RBP10.07□□□□□ -0.8
CSNK1G3-208ENST00000514131 CRKP46108 304 aa10.06□□□□□ -0.8
CSNK1G3-208ENST00000514131 OXCT1P55809 520 aa10.06□□□□□ -0.8
CSNK1G3-208ENST00000514131 CWF19L2Q2TBE0 894 aaKnown RBP10.06□□□□□ -0.8
CSNK1G3-208ENST00000514131 SLC6A19Q695T7 634 aa10.06□□□□□ -0.8
CSNK1G3-208ENST00000514131 USP48Q86UV5 1035 aa10.06□□□□□ -0.8
CSNK1G3-208ENST00000514131 PODXL2Q9NZ53 605 aa10.06□□□□□ -0.8
CSNK1G3-208ENST00000514131 UBP1Q9NZI7 540 aa10.06□□□□□ -0.8
CSNK1G3-208ENST00000514131 GTF2IRD1Q9UHL9 959 aa10.06□□□□□ -0.8
CSNK1G3-208ENST00000514131 PCDHGB7Q9Y5F8 929 aa10.06□□□□□ -0.8
CSNK1G3-208ENST00000514131 ROBO2Q9HCK4 1378 aa10.05□□□□□ -0.8
CSNK1G3-208ENST00000514131 UPK3BL1B0FP48 263 aa10.05□□□□□ -0.8
CSNK1G3-208ENST00000514131 UPK3BL2E5RIL1 263 aa10.05□□□□□ -0.8
CSNK1G3-208ENST00000514131 WNT11O96014 354 aa10.05□□□□□ -0.8
CSNK1G3-208ENST00000514131 ITIH2P19823 946 aa10.05□□□□□ -0.8
CSNK1G3-208ENST00000514131 LETMD1Q6P1Q0 360 aa10.05□□□□□ -0.8
CSNK1G3-208ENST00000514131 NETO1Q8TDF5 533 aa10.05□□□□□ -0.8
CSNK1G3-208ENST00000514131 TPX2Q9ULW0 747 aaKnown RBP10.05□□□□□ -0.8
CSNK1G3-208ENST00000514131 CNTNAP4Q9C0A0 1308 aa10.05□□□□□ -0.8
CSNK1G3-208ENST00000514131 HTR3BO95264 441 aa10.04□□□□□ -0.8
CSNK1G3-208ENST00000514131 SPON2Q9BUD6 331 aa10.04□□□□□ -0.8
CSNK1G3-208ENST00000514131 LRRC3Q9BY71 257 aa10.04□□□□□ -0.8
CSNK1G3-208ENST00000514131 BRMS1Q9HCU9 246 aa10.04□□□□□ -0.8
CSNK1G3-208ENST00000514131 PRDM5Q9NQX1 630 aaPredicted RBP10.04□□□□□ -0.8
CSNK1G3-208ENST00000514131 REV1Q9UBZ9 1251 aa10.04□□□□□ -0.8
CSNK1G3-208ENST00000514131 CCDC39Q9UFE4 941 aa10.04□□□□□ -0.8
CSNK1G3-208ENST00000514131 PRR36Q9H6K5 1346 aa10.04□□□□□ -0.8
CSNK1G3-208ENST00000514131 IGF2BP3O00425 579 aaKnown RBP eCLIP10.03□□□□□ -0.8
CSNK1G3-208ENST00000514131 PRNPP04156 253 aa10.03□□□□□ -0.8
CSNK1G3-208ENST00000514131 SEZ6Q53EL9 994 aa10.03□□□□□ -0.8
CSNK1G3-208ENST00000514131 TMEM201Q5SNT2 666 aa10.03□□□□□ -0.8
CSNK1G3-208ENST00000514131 CDH24Q86UP0 819 aa10.03□□□□□ -0.8
CSNK1G3-208ENST00000514131 KIAA0825Q8IV33 1275 aa10.03□□□□□ -0.8
CSNK1G3-208ENST00000514131 FAM13CQ8NE31 585 aa10.03□□□□□ -0.8
CSNK1G3-208ENST00000514131 ZNF428Q96B54 188 aa10.03□□□□□ -0.8
CSNK1G3-208ENST00000514131 MKNK2Q9HBH9 465 aa10.03□□□□□ -0.8
CSNK1G3-208ENST00000514131 ANGEL1Q9UNK9 670 aaKnown RBP10.03□□□□□ -0.8
CSNK1G3-208ENST00000514131 PLAGL2Q9UPG8 496 aa10.03□□□□□ -0.8
CSNK1G3-208ENST00000514131 APOBRQ0VD83 1088 aa10.02□□□□□ -0.81
CSNK1G3-208ENST00000514131 C9orf131Q5VYM1 1079 aa10.02□□□□□ -0.81
CSNK1G3-208ENST00000514131 EAF1Q96JC9 268 aaPredicted RBP10.02□□□□□ -0.81
CSNK1G3-208ENST00000514131 KLHL3Q9UH77 587 aa10.02□□□□□ -0.81
CSNK1G3-208ENST00000514131 PCDHB14Q9Y5E9 798 aa10.02□□□□□ -0.81
CSNK1G3-208ENST00000514131 RBAK-RBAKDNI3L0D1 243 aa10.01□□□□□ -0.81
CSNK1G3-208ENST00000514131 CEACAM5P06731 702 aa10.01□□□□□ -0.81
CSNK1G3-208ENST00000514131 YARSP54577 528 aaKnown RBP10.01□□□□□ -0.81
CSNK1G3-208ENST00000514131 RACK1P63244 317 aaKnown RBP10.01□□□□□ -0.81
CSNK1G3-208ENST00000514131 IFI16Q16666 785 aaKnown RBP10.01□□□□□ -0.81
CSNK1G3-208ENST00000514131 METTL16Q86W50 562 aaKnown RBP10.01□□□□□ -0.81
CSNK1G3-208ENST00000514131 NT5C1AQ9BXI3 368 aa10.01□□□□□ -0.81
CSNK1G3-208ENST00000514131 DDX41Q9UJV9 622 aaKnown RBP10.01□□□□□ -0.81
CSNK1G3-208ENST00000514131 GNAT3A8MTJ3 354 aa10□□□□□ -0.81
CSNK1G3-208ENST00000514131 CHURC1-FNTBB4DL54 471 aa10□□□□□ -0.81
CSNK1G3-208ENST00000514131 MCM4P33991 863 aa10□□□□□ -0.81
CSNK1G3-208ENST00000514131 GP2P55259 537 aaKnown RBP10□□□□□ -0.81
CSNK1G3-208ENST00000514131 HDLBPQ00341 1268 aaKnown RBP10□□□□□ -0.81
CSNK1G3-208ENST00000514131 BNIP3Q12983 259 aa10□□□□□ -0.81
CSNK1G3-208ENST00000514131 NFXL1Q6ZNB6 911 aa10□□□□□ -0.81
CSNK1G3-208ENST00000514131 VSIG10LQ86VR7 867 aa10□□□□□ -0.81
CSNK1G3-208ENST00000514131 MAPK8IP1Q9UQF2 711 aa10□□□□□ -0.81
CSNK1G3-208ENST00000514131 PRR33A8MZF0 331 aa9.99□□□□□ -0.81
CSNK1G3-208ENST00000514131 DNAJA2O60884 412 aa9.99□□□□□ -0.81
CSNK1G3-208ENST00000514131 SFRP5Q5T4F7 317 aa9.99□□□□□ -0.81
CSNK1G3-208ENST00000514131 BCL7CQ8WUZ0 217 aaPredicted RBP9.99□□□□□ -0.81
CSNK1G3-208ENST00000514131 NKD1Q969G9 470 aa9.99□□□□□ -0.81
CSNK1G3-208ENST00000514131 CLCQ05315 142 aa9.98□□□□□ -0.81
CSNK1G3-208ENST00000514131 NKPD1Q17RQ9 610 aa9.98□□□□□ -0.81
CSNK1G3-208ENST00000514131 ZNF746Q6NUN9 644 aaPredicted RBP9.98□□□□□ -0.81
CSNK1G3-208ENST00000514131 SPRED2Q7Z698 418 aa9.98□□□□□ -0.81
CSNK1G3-208ENST00000514131 FLCNQ8NFG4 579 aa9.98□□□□□ -0.81
CSNK1G3-208ENST00000514131 CEP131Q9UPN4 1083 aa9.98□□□□□ -0.81
CSNK1G3-208ENST00000514131 SLC5A6Q9Y289 635 aa9.98□□□□□ -0.81
CSNK1G3-208ENST00000514131 OAS3Q9Y6K5 1087 aaKnown RBP9.98□□□□□ -0.81
CSNK1G3-208ENST00000514131 TMEM265A0A087WTH1 108 aa9.97□□□□□ -0.81
CSNK1G3-208ENST00000514131 CBX7O95931 251 aa9.97□□□□□ -0.81
CSNK1G3-208ENST00000514131 ZNF574Q6ZN55 896 aaPredicted RBP9.97□□□□□ -0.81
CSNK1G3-208ENST00000514131 GK5Q6ZS86 529 aa9.97□□□□□ -0.81
CSNK1G3-208ENST00000514131 NT5DC4Q86YG4 428 aa9.97□□□□□ -0.81
CSNK1G3-208ENST00000514131 SLITRK4Q8IW52 837 aa9.97□□□□□ -0.81
CSNK1G3-208ENST00000514131 SPACA3Q8IXA5 215 aa9.97□□□□□ -0.81
CSNK1G3-208ENST00000514131 SLFN12Q8IYM2 578 aa9.97□□□□□ -0.81
CSNK1G3-208ENST00000514131 DNAJB8Q8NHS0 232 aa9.97□□□□□ -0.81
CSNK1G3-208ENST00000514131 PPP1R13LQ8WUF5 828 aa9.97□□□□□ -0.81
CSNK1G3-208ENST00000514131 CYB5D2Q8WUJ1 264 aa9.97□□□□□ -0.81
CSNK1G3-208ENST00000514131 TNKS2Q9H2K2 1166 aa9.97□□□□□ -0.81
CSNK1G3-208ENST00000514131 EHMT1Q9H9B1 1298 aa9.97□□□□□ -0.81
CSNK1G3-208ENST00000514131 VAV3Q9UKW4 847 aa9.97□□□□□ -0.81
CSNK1G3-208ENST00000514131 FAM155AB1AL88 458 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms