RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 CEP135Q66GS9 1140 aa14.4□□□□□ -0.1
SDHA-216ENST00000514027 KRI1Q8N9T8 703 aaKnown RBP14.4□□□□□ -0.1
SDHA-216ENST00000514027 GNL3LQ9NVN8 582 aaKnown RBP14.4□□□□□ -0.1
SDHA-216ENST00000514027 RSPH14Q9UHP6 348 aa14.4□□□□□ -0.1
SDHA-216ENST00000514027 KCNH3Q9ULD8 1083 aa14.4□□□□□ -0.1
SDHA-216ENST00000514027 THRAP3Q9Y2W1 955 aaKnown RBP14.4□□□□□ -0.1
SDHA-216ENST00000514027 TNKSO95271 1327 aa14.4□□□□□ -0.1
SDHA-216ENST00000514027 NOP2P46087 812 aaKnown RBP14.39□□□□□ -0.11
SDHA-216ENST00000514027 NR5A1Q13285 461 aa14.39□□□□□ -0.11
SDHA-216ENST00000514027 LONRF3Q496Y0 759 aa14.39□□□□□ -0.11
SDHA-216ENST00000514027 SMIM5Q71RC9 77 aa14.39□□□□□ -0.11
SDHA-216ENST00000514027 BCL9LQ86UU0 1499 aa14.39□□□□□ -0.11
SDHA-216ENST00000514027 COL1A1P02452 1464 aaPredicted RBP14.39□□□□□ -0.11
SDHA-216ENST00000514027 CYP2D7A0A087X1C5 515 aa14.39□□□□□ -0.11
SDHA-216ENST00000514027 CCDC196A0A1B0GTZ2 297 aa14.39□□□□□ -0.11
SDHA-216ENST00000514027 DEXIO95424 95 aa14.39□□□□□ -0.11
SDHA-216ENST00000514027 ATP1A3P13637 1013 aa14.39□□□□□ -0.11
SDHA-216ENST00000514027 DYNLL1P63167 89 aaKnown RBP14.39□□□□□ -0.11
SDHA-216ENST00000514027 NCAPHQ15003 741 aa14.39□□□□□ -0.11
SDHA-216ENST00000514027 CAVIN4Q5BKX8 364 aa14.39□□□□□ -0.11
SDHA-216ENST00000514027 METTL16Q86W50 562 aaKnown RBP14.39□□□□□ -0.11
SDHA-216ENST00000514027 FANCBQ8NB91 859 aa14.39□□□□□ -0.11
SDHA-216ENST00000514027 ZNF397Q8NF99 534 aaPredicted RBP14.39□□□□□ -0.11
SDHA-216ENST00000514027 ESR2Q92731 530 aa14.39□□□□□ -0.11
SDHA-216ENST00000514027 BCCIPQ9P287 314 aaKnown RBP eCLIP14.39□□□□□ -0.11
SDHA-216ENST00000514027 NRAPQ86VF7 1730 aa14.39□□□□□ -0.11
SDHA-216ENST00000514027 RREB1Q92766 1687 aa14.39□□□□□ -0.11
SDHA-216ENST00000514027 PRDM1O75626 825 aa14.38□□□□□ -0.11
SDHA-216ENST00000514027 GRIN1Q05586 938 aa14.38□□□□□ -0.11
SDHA-216ENST00000514027 PTPN14Q15678 1187 aa14.38□□□□□ -0.11
SDHA-216ENST00000514027 TMTC2Q8N394 836 aa14.38□□□□□ -0.11
SDHA-216ENST00000514027 CRACR2BQ8N4Y2 399 aaPredicted RBP14.38□□□□□ -0.11
SDHA-216ENST00000514027 CCDC112Q8NEF3 446 aa14.38□□□□□ -0.11
SDHA-216ENST00000514027 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.38□□□□□ -0.11
SDHA-216ENST00000514027 TUBE1Q9UJT0 475 aa14.38□□□□□ -0.11
SDHA-216ENST00000514027 NID2Q14112 1375 aa14.38□□□□□ -0.11
SDHA-216ENST00000514027 FOXN1O15353 648 aa14.38□□□□□ -0.11
SDHA-216ENST00000514027 SERPINC1P01008 464 aa14.38□□□□□ -0.11
SDHA-216ENST00000514027 TOB1P50616 345 aaPredicted RBP14.38□□□□□ -0.11
SDHA-216ENST00000514027 FANCCQ00597 558 aa14.38□□□□□ -0.11
SDHA-216ENST00000514027 NAA30Q147X3 362 aaPredicted RBP14.38□□□□□ -0.11
SDHA-216ENST00000514027 OLFM4Q6UX06 510 aa14.38□□□□□ -0.11
SDHA-216ENST00000514027 KRBA2Q6ZNG9 492 aa14.38□□□□□ -0.11
SDHA-216ENST00000514027 IMPACTQ9P2X3 320 aa14.38□□□□□ -0.11
SDHA-216ENST00000514027 LOC102724159A0A0B4J2E5 919 aa14.37□□□□□ -0.11
SDHA-216ENST00000514027 hCG_1642624A0A1W2PR95 340 aa14.37□□□□□ -0.11
SDHA-216ENST00000514027 SFPQP23246 707 aaKnown RBP eCLIP14.37□□□□□ -0.11
SDHA-216ENST00000514027 AKAP17AQ02040 695 aaKnown RBP14.37□□□□□ -0.11
SDHA-216ENST00000514027 MYL5Q02045 173 aa14.37□□□□□ -0.11
SDHA-216ENST00000514027 PWP2Q15269 919 aaKnown RBP14.37□□□□□ -0.11
SDHA-216ENST00000514027 KMT5BQ4FZB7 885 aa14.37□□□□□ -0.11
SDHA-216ENST00000514027 OXER1Q8TDS5 423 aa14.37□□□□□ -0.11
SDHA-216ENST00000514027 OSBPL5Q9H0X9 879 aaPredicted RBP14.37□□□□□ -0.11
SDHA-216ENST00000514027 RASSF4Q9H2L5 321 aa14.37□□□□□ -0.11
SDHA-216ENST00000514027 ST7Q9NRC1 585 aa14.37□□□□□ -0.11
SDHA-216ENST00000514027 KCNG1Q9UIX4 513 aa14.37□□□□□ -0.11
SDHA-216ENST00000514027 PAXBP1Q9Y5B6 917 aa14.37□□□□□ -0.11
SDHA-216ENST00000514027 PCDHB6Q9Y5E3 794 aa14.37□□□□□ -0.11
SDHA-216ENST00000514027 ZNF804BA4D1E1 1349 aa14.37□□□□□ -0.11
SDHA-216ENST00000514027 BAZ2AQ9UIF9 1905 aaKnown RBP14.37□□□□□ -0.11
SDHA-216ENST00000514027 IKBKBO14920 756 aa14.37□□□□□ -0.11
SDHA-216ENST00000514027 RILPL1Q5EBL4 403 aa14.37□□□□□ -0.11
SDHA-216ENST00000514027 ARMCX5Q6P1M9 558 aa14.37□□□□□ -0.11
SDHA-216ENST00000514027 LINC00116Q8NCU8 138 aa14.37□□□□□ -0.11
SDHA-216ENST00000514027 CCDC150Q8NCX0 1101 aa14.37□□□□□ -0.11
SDHA-216ENST00000514027 SMARCC1Q92922 1105 aaPredicted RBP14.37□□□□□ -0.11
SDHA-216ENST00000514027 FOXP1Q9H334 677 aaPredicted RBP14.37□□□□□ -0.11
SDHA-216ENST00000514027 PCDHA5Q9Y5H7 936 aa14.37□□□□□ -0.11
SDHA-216ENST00000514027 SPATA31A5Q5VU36 1347 aa14.36□□□□□ -0.11
SDHA-216ENST00000514027 SPATA31A7Q8IWB4 1347 aa14.36□□□□□ -0.11
SDHA-216ENST00000514027 MYH6P13533 1939 aa14.36□□□□□ -0.11
SDHA-216ENST00000514027 POLR2DO15514 142 aaKnown RBP14.36□□□□□ -0.11
SDHA-216ENST00000514027 UBE4AQ14139 1066 aa14.36□□□□□ -0.11
SDHA-216ENST00000514027 HSP90AA4PQ58FG1 418 aa14.36□□□□□ -0.11
SDHA-216ENST00000514027 IFIT1BQ5T764 474 aaKnown RBP14.36□□□□□ -0.11
SDHA-216ENST00000514027 CCAR2Q8N163 923 aaKnown RBP14.36□□□□□ -0.11
SDHA-216ENST00000514027 PDILTQ8N807 584 aa14.36□□□□□ -0.11
SDHA-216ENST00000514027 CELF1Q92879 486 aaKnown RBP14.36□□□□□ -0.11
SDHA-216ENST00000514027 ZNF622Q969S3 477 aaKnown RBP eCLIP14.36□□□□□ -0.11
SDHA-216ENST00000514027 RIOK1Q9BRS2 568 aaKnown RBP14.36□□□□□ -0.11
SDHA-216ENST00000514027 CABP5Q9NP86 173 aa14.36□□□□□ -0.11
SDHA-216ENST00000514027 VPS54Q9P1Q0 977 aa14.36□□□□□ -0.11
SDHA-216ENST00000514027 FAM237AA0A1B0GTK4 181 aa14.35□□□□□ -0.11
SDHA-216ENST00000514027 GTF2A1P52655 376 aaPredicted RBP14.35□□□□□ -0.11
SDHA-216ENST00000514027 UBASH3AP57075 661 aa14.35□□□□□ -0.11
SDHA-216ENST00000514027 CFAP100Q494V2 611 aa14.35□□□□□ -0.11
SDHA-216ENST00000514027 ENAHQ8N8S7 591 aaPredicted RBP14.35□□□□□ -0.11
SDHA-216ENST00000514027 ZSCAN10Q96SZ4 725 aaPredicted RBP14.35□□□□□ -0.11
SDHA-216ENST00000514027 BSDC1Q9NW68 430 aaPredicted RBP14.35□□□□□ -0.11
SDHA-216ENST00000514027 HOOK1Q9UJC3 728 aaKnown RBP14.35□□□□□ -0.11
SDHA-216ENST00000514027 FBXO2Q9UK22 296 aaPredicted RBP14.35□□□□□ -0.11
SDHA-216ENST00000514027 MINPP1Q9UNW1 487 aa14.35□□□□□ -0.11
SDHA-216ENST00000514027 A0A1B0GUL6 1792 aa14.35□□□□□ -0.11
SDHA-216ENST00000514027 CASZ1Q86V15 1759 aa14.35□□□□□ -0.11
SDHA-216ENST00000514027 MYH2Q9UKX2 1941 aa14.35□□□□□ -0.11
SDHA-216ENST00000514027 KLRK1P26718 216 aa14.35□□□□□ -0.11
SDHA-216ENST00000514027 SEC23AQ15436 765 aa14.35□□□□□ -0.11
SDHA-216ENST00000514027 PTPN21Q16825 1174 aa14.35□□□□□ -0.11
SDHA-216ENST00000514027 CTR9Q6PD62 1173 aa14.35□□□□□ -0.11
SDHA-216ENST00000514027 FOXP4Q8IVH2 680 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms