RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 CEP112Q8N8E3 955 aa10.95□□□□□ -0.66
VCAN-210ENST00000513960 CRACR2AQ9BSW2 395 aa10.95□□□□□ -0.66
VCAN-210ENST00000513960 PAPPAQ13219 1627 aa10.95□□□□□ -0.66
VCAN-210ENST00000513960 RIC1Q4ADV7 1423 aa10.95□□□□□ -0.66
VCAN-210ENST00000513960 WDR19Q8NEZ3 1342 aa10.95□□□□□ -0.66
VCAN-210ENST00000513960 FOXN1O15353 648 aa10.95□□□□□ -0.66
VCAN-210ENST00000513960 ZMYND10O75800 440 aa10.95□□□□□ -0.66
VCAN-210ENST00000513960 LIG3P49916 1009 aa10.95□□□□□ -0.66
VCAN-210ENST00000513960 LAMA4Q16363 1823 aa10.95□□□□□ -0.66
VCAN-210ENST00000513960 MROH5Q6ZUA9 1318 aa10.95□□□□□ -0.66
VCAN-210ENST00000513960 A0A1W2PQ27 194 aa10.95□□□□□ -0.66
VCAN-210ENST00000513960 A0A1W2PQ64 194 aa10.95□□□□□ -0.66
VCAN-210ENST00000513960 A0A1W2PQD8 194 aa10.95□□□□□ -0.66
VCAN-210ENST00000513960 CCDC151A5D8V7 595 aa10.95□□□□□ -0.66
VCAN-210ENST00000513960 YEATS4O95619 227 aa10.95□□□□□ -0.66
VCAN-210ENST00000513960 BRD3Q15059 726 aa10.95□□□□□ -0.66
VCAN-210ENST00000513960 RRP12Q5JTH9 1297 aaKnown RBP10.95□□□□□ -0.66
VCAN-210ENST00000513960 SPECC1LQ69YQ0 1117 aa10.95□□□□□ -0.66
VCAN-210ENST00000513960 CDC5LQ99459 802 aaKnown RBP10.95□□□□□ -0.66
VCAN-210ENST00000513960 GBP3Q9H0R5 595 aa10.95□□□□□ -0.66
VCAN-210ENST00000513960 NAPBQ9H115 298 aa10.95□□□□□ -0.66
VCAN-210ENST00000513960 HPS5Q9UPZ3 1129 aa10.95□□□□□ -0.66
VCAN-210ENST00000513960 B4E1Z4 1266 aa10.94□□□□□ -0.66
VCAN-210ENST00000513960 NCAPHQ15003 741 aa10.94□□□□□ -0.66
VCAN-210ENST00000513960 FILIP1LQ4L180 1135 aa10.94□□□□□ -0.66
VCAN-210ENST00000513960 SRGAP1Q7Z6B7 1085 aa10.94□□□□□ -0.66
VCAN-210ENST00000513960 ILDR1Q86SU0 546 aaPredicted RBP10.94□□□□□ -0.66
VCAN-210ENST00000513960 SLC4A9Q96Q91 983 aa10.94□□□□□ -0.66
VCAN-210ENST00000513960 MRPL44Q9H9J2 332 aaKnown RBP10.94□□□□□ -0.66
VCAN-210ENST00000513960 KIF28PB7ZC32 967 aa10.94□□□□□ -0.66
VCAN-210ENST00000513960 AKR1B15C9JRZ8 316 aaPredicted RBP10.94□□□□□ -0.66
VCAN-210ENST00000513960 CCT6AP40227 531 aaKnown RBP10.94□□□□□ -0.66
VCAN-210ENST00000513960 TTC19Q6DKK2 380 aaPredicted RBP10.94□□□□□ -0.66
VCAN-210ENST00000513960 IGSF22Q8N9C0 903 aa10.94□□□□□ -0.66
VCAN-210ENST00000513960 NUP88Q99567 741 aaPredicted RBP10.94□□□□□ -0.66
VCAN-210ENST00000513960 MYL10Q9BUA6 226 aa10.94□□□□□ -0.66
VCAN-210ENST00000513960 KCNH3Q9ULD8 1083 aa10.94□□□□□ -0.66
VCAN-210ENST00000513960 WWC3Q9ULE0 1092 aa10.94□□□□□ -0.66
VCAN-210ENST00000513960 GUCA1BQ9UMX6 200 aa10.94□□□□□ -0.66
VCAN-210ENST00000513960 SLC35F6Q8N357 371 aa10.94□□□□□ -0.66
VCAN-210ENST00000513960 SPATA5Q8NB90 893 aa10.94□□□□□ -0.66
VCAN-210ENST00000513960 TMEM87BQ96K49 555 aa10.94□□□□□ -0.66
VCAN-210ENST00000513960 CENPHQ9H3R5 247 aa10.94□□□□□ -0.66
VCAN-210ENST00000513960 SAMSN1Q9NSI8 373 aaKnown RBP10.94□□□□□ -0.66
VCAN-210ENST00000513960 POLR3EQ9NVU0 708 aa10.94□□□□□ -0.66
VCAN-210ENST00000513960 BCL9O00512 1426 aa10.94□□□□□ -0.66
VCAN-210ENST00000513960 ZBTB43O43298 467 aa10.93□□□□□ -0.66
VCAN-210ENST00000513960 MAP3K9P80192 1104 aa10.93□□□□□ -0.66
VCAN-210ENST00000513960 SETQ01105 290 aaPredicted RBP10.93□□□□□ -0.66
VCAN-210ENST00000513960 SAFBQ15424 915 aaKnown RBP eCLIP10.93□□□□□ -0.66
VCAN-210ENST00000513960 TMEM67Q5HYA8 995 aa10.93□□□□□ -0.66
VCAN-210ENST00000513960 TBC1D10CQ8IV04 446 aa10.93□□□□□ -0.66
VCAN-210ENST00000513960 VGLL2Q8N8G2 317 aa10.93□□□□□ -0.66
VCAN-210ENST00000513960 ZMYM6O95789 1325 aa10.93□□□□□ -0.66
VCAN-210ENST00000513960 POTEB2H3BUK9 544 aa10.93□□□□□ -0.66
VCAN-210ENST00000513960 FANCGO15287 622 aa10.93□□□□□ -0.66
VCAN-210ENST00000513960 CMA1P23946 247 aa10.93□□□□□ -0.66
VCAN-210ENST00000513960 ARID4AP29374 1257 aaPredicted RBP10.93□□□□□ -0.66
VCAN-210ENST00000513960 CASP8Q14790 479 aa10.93□□□□□ -0.66
VCAN-210ENST00000513960 MAGEB6Q8N7X4 407 aa10.93□□□□□ -0.66
VCAN-210ENST00000513960 ACRBPQ8NEB7 543 aa10.93□□□□□ -0.66
VCAN-210ENST00000513960 AFAP1L1Q8TED9 768 aa10.93□□□□□ -0.66
VCAN-210ENST00000513960 PPM1EQ8WY54 764 aa10.93□□□□□ -0.66
VCAN-210ENST00000513960 PCMTD1Q96MG8 357 aaPredicted RBP10.93□□□□□ -0.66
VCAN-210ENST00000513960 XIRP1Q702N8 1843 aaKnown RBP10.93□□□□□ -0.66
VCAN-210ENST00000513960 MROH7-TTC4A0A0A0MT08 1334 aa10.93□□□□□ -0.66
VCAN-210ENST00000513960 A0A0U1RQJ8 604 aa10.93□□□□□ -0.66
VCAN-210ENST00000513960 IKBKBO14920 756 aa10.93□□□□□ -0.66
VCAN-210ENST00000513960 IGHMBP2P38935 993 aaKnown RBP10.93□□□□□ -0.66
VCAN-210ENST00000513960 IARSP41252 1262 aaKnown RBP10.93□□□□□ -0.66
VCAN-210ENST00000513960 VPS37DQ86XT2 251 aa10.93□□□□□ -0.66
VCAN-210ENST00000513960 ATRIPQ8WXE1 791 aa10.93□□□□□ -0.66
VCAN-210ENST00000513960 PNKPQ96T60 521 aa10.93□□□□□ -0.66
VCAN-210ENST00000513960 DACH1Q9UI36 760 aa10.93□□□□□ -0.66
VCAN-210ENST00000513960 GOLGA8AA7E2F4 631 aa10.92□□□□□ -0.66
VCAN-210ENST00000513960 POLR2DO15514 142 aaKnown RBP10.92□□□□□ -0.66
VCAN-210ENST00000513960 MATR3P43243 847 aaKnown RBP eCLIP10.92□□□□□ -0.66
VCAN-210ENST00000513960 CYB5R4Q7L1T6 521 aa10.92□□□□□ -0.66
VCAN-210ENST00000513960 ZNF34Q8IZ26 560 aa10.92□□□□□ -0.66
VCAN-210ENST00000513960 CCDC148Q8NFR7 591 aa10.92□□□□□ -0.66
VCAN-210ENST00000513960 STRBPQ96SI9 672 aaKnown RBP10.92□□□□□ -0.66
VCAN-210ENST00000513960 SLC26A6Q9BXS9 759 aa10.92□□□□□ -0.66
VCAN-210ENST00000513960 NACAP1Q9BZK3 213 aa10.92□□□□□ -0.66
VCAN-210ENST00000513960 SH2B2O14492 632 aaPredicted RBP10.92□□□□□ -0.66
VCAN-210ENST00000513960 IFIT3O14879 490 aaKnown RBP10.92□□□□□ -0.66
VCAN-210ENST00000513960 STX10O60499 249 aa10.92□□□□□ -0.66
VCAN-210ENST00000513960 MBD4O95243 580 aa10.92□□□□□ -0.66
VCAN-210ENST00000513960 VSNL1P62760 191 aa10.92□□□□□ -0.66
VCAN-210ENST00000513960 KIF23Q02241 960 aaPredicted RBP10.92□□□□□ -0.66
VCAN-210ENST00000513960 TSR1Q2NL82 804 aaKnown RBP10.92□□□□□ -0.66
VCAN-210ENST00000513960 NCAPH2Q6IBW4 605 aa10.92□□□□□ -0.66
VCAN-210ENST00000513960 APOA5Q6Q788 366 aa10.92□□□□□ -0.66
VCAN-210ENST00000513960 PACS2Q86VP3 889 aa10.92□□□□□ -0.66
VCAN-210ENST00000513960 RASSF8Q8NHQ8 419 aa10.92□□□□□ -0.66
VCAN-210ENST00000513960 RUFY1Q96T51 708 aa10.92□□□□□ -0.66
VCAN-210ENST00000513960 UBN2Q6ZU65 1347 aa10.92□□□□□ -0.66
VCAN-210ENST00000513960 PATL2C9JE40 543 aaKnown RBP10.92□□□□□ -0.66
VCAN-210ENST00000513960 ENC1O14682 589 aa10.92□□□□□ -0.66
VCAN-210ENST00000513960 CUTAO60888 179 aa10.92□□□□□ -0.66
VCAN-210ENST00000513960 TDO2P48775 406 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms