RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.84□□□□□ -0.83
NEDD4-210ENST00000513957 DCP1AQ9NPI6 582 aaPredicted RBP9.84□□□□□ -0.83
NEDD4-210ENST00000513957 PRDM10Q9NQV6 1147 aa9.84□□□□□ -0.83
NEDD4-210ENST00000513957 PICK1Q9NRD5 415 aa9.84□□□□□ -0.83
NEDD4-210ENST00000513957 SERPINB13Q9UIV8 391 aa9.84□□□□□ -0.83
NEDD4-210ENST00000513957 HIP1O00291 1037 aa9.83□□□□□ -0.84
NEDD4-210ENST00000513957 CXCL11O14625 94 aa9.83□□□□□ -0.84
NEDD4-210ENST00000513957 MBD4O95243 580 aa9.83□□□□□ -0.84
NEDD4-210ENST00000513957 ASNSP08243 561 aa9.83□□□□□ -0.84
NEDD4-210ENST00000513957 INPP5BP32019 993 aa9.83□□□□□ -0.84
NEDD4-210ENST00000513957 IRX6P78412 446 aaPredicted RBP9.83□□□□□ -0.84
NEDD4-210ENST00000513957 SNAPC2Q13487 334 aa9.83□□□□□ -0.84
NEDD4-210ENST00000513957 ERICH6BQ5W0A0 696 aa9.83□□□□□ -0.84
NEDD4-210ENST00000513957 B4GALNT3Q6L9W6 998 aa9.83□□□□□ -0.84
NEDD4-210ENST00000513957 CENPQQ7L2Z9 268 aaPredicted RBP9.83□□□□□ -0.84
NEDD4-210ENST00000513957 PLEKHM2Q8IWE5 1019 aa9.83□□□□□ -0.84
NEDD4-210ENST00000513957 LCORLQ8N3X6 602 aa9.83□□□□□ -0.84
NEDD4-210ENST00000513957 CRACR2BQ8N4Y2 399 aaPredicted RBP9.83□□□□□ -0.84
NEDD4-210ENST00000513957 ELP3Q9H9T3 547 aa9.83□□□□□ -0.84
NEDD4-210ENST00000513957 ARPP21Q9UBL0 812 aaPredicted RBP9.83□□□□□ -0.84
NEDD4-210ENST00000513957 SWAP70Q9UH65 585 aa9.83□□□□□ -0.84
NEDD4-210ENST00000513957 FZD1Q9UP38 647 aa9.83□□□□□ -0.84
NEDD4-210ENST00000513957 KCNH4Q9UQ05 1017 aa9.83□□□□□ -0.84
NEDD4-210ENST00000513957 LAMA4Q16363 1823 aa9.83□□□□□ -0.84
NEDD4-210ENST00000513957 GREB1LQ9C091 1923 aaPredicted RBP9.82□□□□□ -0.84
NEDD4-210ENST00000513957 CETPP11597 493 aa9.82□□□□□ -0.84
NEDD4-210ENST00000513957 CAP2P40123 477 aa9.82□□□□□ -0.84
NEDD4-210ENST00000513957 MKRN3Q13064 507 aaKnown RBP9.82□□□□□ -0.84
NEDD4-210ENST00000513957 ZMYM1Q5SVZ6 1142 aa9.82□□□□□ -0.84
NEDD4-210ENST00000513957 ZNF467Q7Z7K2 595 aaPredicted RBP9.82□□□□□ -0.84
NEDD4-210ENST00000513957 RASEFQ8IZ41 740 aa9.82□□□□□ -0.84
NEDD4-210ENST00000513957 ZKSCAN4Q969J2 545 aaPredicted RBP9.82□□□□□ -0.84
NEDD4-210ENST00000513957 OTUD5Q96G74 571 aa9.82□□□□□ -0.84
NEDD4-210ENST00000513957 PUS7LQ9H0K6 701 aaKnown RBP9.82□□□□□ -0.84
NEDD4-210ENST00000513957 ARMT1Q9H993 441 aa9.82□□□□□ -0.84
NEDD4-210ENST00000513957 AS3MTQ9HBK9 375 aa9.82□□□□□ -0.84
NEDD4-210ENST00000513957 MCM9Q9NXL9 1143 aa9.82□□□□□ -0.84
NEDD4-210ENST00000513957 PALD1Q9ULE6 856 aa9.82□□□□□ -0.84
NEDD4-210ENST00000513957 ARIH1Q9Y4X5 557 aaPredicted RBP9.82□□□□□ -0.84
NEDD4-210ENST00000513957 ROBO3Q96MS0 1386 aa9.82□□□□□ -0.84
NEDD4-210ENST00000513957 FOXN1O15353 648 aa9.81□□□□□ -0.84
NEDD4-210ENST00000513957 GPAA1O43292 621 aa9.81□□□□□ -0.84
NEDD4-210ENST00000513957 POLR3DP05423 398 aaPredicted RBP9.81□□□□□ -0.84
NEDD4-210ENST00000513957 PTPRAP18433 802 aa9.81□□□□□ -0.84
NEDD4-210ENST00000513957 GJA5P36382 358 aa9.81□□□□□ -0.84
NEDD4-210ENST00000513957 MFAP1P55081 439 aaKnown RBP9.81□□□□□ -0.84
NEDD4-210ENST00000513957 GABPAQ06546 454 aa9.81□□□□□ -0.84
NEDD4-210ENST00000513957 TATDN1Q6P1N9 297 aa9.81□□□□□ -0.84
NEDD4-210ENST00000513957 FASTKD5Q7L8L6 764 aaKnown RBP9.81□□□□□ -0.84
NEDD4-210ENST00000513957 IFNL1Q8IU54 200 aa9.81□□□□□ -0.84
NEDD4-210ENST00000513957 SDR42E1Q8WUS8 393 aa9.81□□□□□ -0.84
NEDD4-210ENST00000513957 OSBP2Q969R2 916 aa9.81□□□□□ -0.84
NEDD4-210ENST00000513957 MS4A4AQ96JQ5 239 aa9.81□□□□□ -0.84
NEDD4-210ENST00000513957 STRBPQ96SI9 672 aaKnown RBP9.81□□□□□ -0.84
NEDD4-210ENST00000513957 ZIC5Q96T25 663 aa9.81□□□□□ -0.84
NEDD4-210ENST00000513957 NACAP1Q9BZK3 213 aa9.81□□□□□ -0.84
NEDD4-210ENST00000513957 HELLSQ9NRZ9 838 aa9.81□□□□□ -0.84
NEDD4-210ENST00000513957 RNF186Q9NXI6 227 aa9.81□□□□□ -0.84
NEDD4-210ENST00000513957 SLC4A4Q9Y6R1 1079 aa9.81□□□□□ -0.84
NEDD4-210ENST00000513957 ZMYM6O95789 1325 aa9.81□□□□□ -0.84
NEDD4-210ENST00000513957 CCL15-CCL14A0A0B4J2E2 113 aa9.8□□□□□ -0.84
NEDD4-210ENST00000513957 TRIM6-TRIM34B2RNG4 842 aa9.8□□□□□ -0.84
NEDD4-210ENST00000513957 IRF6O14896 467 aa9.8□□□□□ -0.84
NEDD4-210ENST00000513957 TRIM66O15016 1216 aa9.8□□□□□ -0.84
NEDD4-210ENST00000513957 HSPA8P11142 646 aaKnown RBP9.8□□□□□ -0.84
NEDD4-210ENST00000513957 PDE4DQ08499 809 aa9.8□□□□□ -0.84
NEDD4-210ENST00000513957 CCL15Q16663 113 aa9.8□□□□□ -0.84
NEDD4-210ENST00000513957 SBK1Q52WX2 424 aa9.8□□□□□ -0.84
NEDD4-210ENST00000513957 GPIHBP1Q8IV16 184 aa9.8□□□□□ -0.84
NEDD4-210ENST00000513957 DNAJC18Q9H819 358 aa9.8□□□□□ -0.84
NEDD4-210ENST00000513957 ZNF287Q9HBT7 754 aa9.8□□□□□ -0.84
NEDD4-210ENST00000513957 SAP30BPQ9UHR5 308 aaKnown RBP9.8□□□□□ -0.84
NEDD4-210ENST00000513957 SLC45A1Q9Y2W3 748 aa9.8□□□□□ -0.84
NEDD4-210ENST00000513957 AFG3L2Q9Y4W6 797 aa9.8□□□□□ -0.84
NEDD4-210ENST00000513957 CASP8AP2Q9UKL3 1982 aa9.8□□□□□ -0.84
NEDD4-210ENST00000513957 A0A0G2JLL6 359 aaPredicted RBP9.79□□□□□ -0.84
NEDD4-210ENST00000513957 USP17L5A8MUK1 530 aa9.79□□□□□ -0.84
NEDD4-210ENST00000513957 PATL2C9JE40 543 aaKnown RBP9.79□□□□□ -0.84
NEDD4-210ENST00000513957 GABBR2O75899 941 aa9.79□□□□□ -0.84
NEDD4-210ENST00000513957 NT5C2P49902 561 aa9.79□□□□□ -0.84
NEDD4-210ENST00000513957 PLCD1P51178 756 aa9.79□□□□□ -0.84
NEDD4-210ENST00000513957 TTC22Q5TAA0 569 aa9.79□□□□□ -0.84
NEDD4-210ENST00000513957 C12orf60Q5U649 245 aa9.79□□□□□ -0.84
NEDD4-210ENST00000513957 PRRT2Q7Z6L0 340 aaPredicted RBP9.79□□□□□ -0.84
NEDD4-210ENST00000513957 ANKRD23Q86SG2 305 aa9.79□□□□□ -0.84
NEDD4-210ENST00000513957 PROCA1Q8NCQ7 364 aaPredicted RBP9.79□□□□□ -0.84
NEDD4-210ENST00000513957 ZNF280CQ8ND82 737 aa9.79□□□□□ -0.84
NEDD4-210ENST00000513957 CCDC17Q96LX7 622 aa9.79□□□□□ -0.84
NEDD4-210ENST00000513957 WDR18Q9BV38 432 aa9.79□□□□□ -0.84
NEDD4-210ENST00000513957 ZBTB21Q9ULJ3 1066 aa9.79□□□□□ -0.84
NEDD4-210ENST00000513957 ZHX2Q9Y6X8 837 aa9.79□□□□□ -0.84
NEDD4-210ENST00000513957 MYH4Q9Y623 1939 aa9.79□□□□□ -0.84
NEDD4-210ENST00000513957 MGAMO43451 1857 aa9.79□□□□□ -0.84
NEDD4-210ENST00000513957 GSG1L2A8MUP6 293 aa9.78□□□□□ -0.84
NEDD4-210ENST00000513957 C19orf81C9J6K1 198 aa9.78□□□□□ -0.84
NEDD4-210ENST00000513957 USP17L12C9JPN9 530 aa9.78□□□□□ -0.84
NEDD4-210ENST00000513957 USP17L21D6R901 530 aa9.78□□□□□ -0.84
NEDD4-210ENST00000513957 M0R2C6 588 aa9.78□□□□□ -0.84
NEDD4-210ENST00000513957 IGF2BP3O00425 579 aaKnown RBP eCLIP9.78□□□□□ -0.84
NEDD4-210ENST00000513957 TRPA1O75762 1119 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms