RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 PI4KBQ9UBF8 816 aa9.05□□□□□ -0.96
HMGXB3-204ENST00000513318 SAP30BPQ9UHR5 308 aaKnown RBP9.05□□□□□ -0.96
HMGXB3-204ENST00000513318 PALD1Q9ULE6 856 aa9.05□□□□□ -0.96
HMGXB3-204ENST00000513318 MYH6P13533 1939 aa9.04□□□□□ -0.96
HMGXB3-204ENST00000513318 USP17L12C9JPN9 530 aa9.04□□□□□ -0.96
HMGXB3-204ENST00000513318 USP17L21D6R901 530 aa9.04□□□□□ -0.96
HMGXB3-204ENST00000513318 EIF5BO60841 1220 aaKnown RBP9.04□□□□□ -0.96
HMGXB3-204ENST00000513318 REC8O95072 547 aa9.04□□□□□ -0.96
HMGXB3-204ENST00000513318 FKBP1BP68106 108 aa9.04□□□□□ -0.96
HMGXB3-204ENST00000513318 SBK1Q52WX2 424 aa9.04□□□□□ -0.96
HMGXB3-204ENST00000513318 NBPF12Q5TAG4 269 aaPredicted RBP9.04□□□□□ -0.96
HMGXB3-204ENST00000513318 PRAMEF18Q5VWM3 479 aa9.04□□□□□ -0.96
HMGXB3-204ENST00000513318 CDAN1Q8IWY9 1227 aa9.04□□□□□ -0.96
HMGXB3-204ENST00000513318 ZFPM1Q8IX07 1006 aa9.04□□□□□ -0.96
HMGXB3-204ENST00000513318 TMC2Q8TDI7 906 aa9.04□□□□□ -0.96
HMGXB3-204ENST00000513318 TRIM34Q9BYJ4 488 aa9.04□□□□□ -0.96
HMGXB3-204ENST00000513318 ANO2Q9NQ90 1003 aa9.04□□□□□ -0.96
HMGXB3-204ENST00000513318 HERC5Q9UII4 1024 aaKnown RBP9.04□□□□□ -0.96
HMGXB3-204ENST00000513318 PARP14Q460N5 1801 aa9.03□□□□□ -0.96
HMGXB3-204ENST00000513318 EPB41L2O43491 1005 aaKnown RBP9.03□□□□□ -0.96
HMGXB3-204ENST00000513318 PPP1R12BO60237 982 aaPredicted RBP9.03□□□□□ -0.96
HMGXB3-204ENST00000513318 TBC1D12O60347 775 aa9.03□□□□□ -0.96
HMGXB3-204ENST00000513318 CELF2O95319 508 aaKnown RBP9.03□□□□□ -0.96
HMGXB3-204ENST00000513318 FGAP02671 866 aa9.03□□□□□ -0.96
HMGXB3-204ENST00000513318 SLC4A8Q2Y0W8 1093 aa9.03□□□□□ -0.96
HMGXB3-204ENST00000513318 C12orf60Q5U649 245 aa9.03□□□□□ -0.96
HMGXB3-204ENST00000513318 CTR9Q6PD62 1173 aa9.03□□□□□ -0.96
HMGXB3-204ENST00000513318 DLK2Q6UY11 383 aa9.03□□□□□ -0.96
HMGXB3-204ENST00000513318 METTL16Q86W50 562 aaKnown RBP9.03□□□□□ -0.96
HMGXB3-204ENST00000513318 FOXP4Q8IVH2 680 aaPredicted RBP9.03□□□□□ -0.96
HMGXB3-204ENST00000513318 CRACR2BQ8N4Y2 399 aaPredicted RBP9.03□□□□□ -0.96
HMGXB3-204ENST00000513318 LARP6Q9BRS8 491 aaKnown RBP9.03□□□□□ -0.96
HMGXB3-204ENST00000513318 LSG1Q9H089 658 aaKnown RBP9.03□□□□□ -0.96
HMGXB3-204ENST00000513318 ZNF408Q9H9D4 720 aa9.03□□□□□ -0.96
HMGXB3-204ENST00000513318 SWAP70Q9UH65 585 aa9.03□□□□□ -0.96
HMGXB3-204ENST00000513318 CTNNA3Q9UI47 895 aa9.03□□□□□ -0.96
HMGXB3-204ENST00000513318 SERPINB13Q9UIV8 391 aa9.03□□□□□ -0.96
HMGXB3-204ENST00000513318 LOC285556D6RIA3 1793 aa9.03□□□□□ -0.96
HMGXB3-204ENST00000513318 MINDY4BA8MYZ0 360 aa9.02□□□□□ -0.97
HMGXB3-204ENST00000513318 SLC3A2P08195 630 aaKnown RBP9.02□□□□□ -0.97
HMGXB3-204ENST00000513318 CYP2D6P10635 497 aa9.02□□□□□ -0.97
HMGXB3-204ENST00000513318 PLCD1P51178 756 aa9.02□□□□□ -0.97
HMGXB3-204ENST00000513318 MAP3K10Q02779 954 aa9.02□□□□□ -0.97
HMGXB3-204ENST00000513318 PTH1RQ03431 593 aa9.02□□□□□ -0.97
HMGXB3-204ENST00000513318 GABPAQ06546 454 aa9.02□□□□□ -0.97
HMGXB3-204ENST00000513318 FMR1Q06787 632 aaKnown RBP eCLIP9.02□□□□□ -0.97
HMGXB3-204ENST00000513318 PPARAQ07869 468 aa9.02□□□□□ -0.97
HMGXB3-204ENST00000513318 MAP3K11Q16584 847 aa9.02□□□□□ -0.97
HMGXB3-204ENST00000513318 IMMTQ16891 758 aaKnown RBP9.02□□□□□ -0.97
HMGXB3-204ENST00000513318 C16orf86Q6ZW13 317 aa9.02□□□□□ -0.97
HMGXB3-204ENST00000513318 MAP4K1Q92918 833 aa9.02□□□□□ -0.97
HMGXB3-204ENST00000513318 ZNF341Q9BYN7 854 aa9.02□□□□□ -0.97
HMGXB3-204ENST00000513318 DNAJC18Q9H819 358 aa9.02□□□□□ -0.97
HMGXB3-204ENST00000513318 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.02□□□□□ -0.97
HMGXB3-204ENST00000513318 GBA2Q9HCG7 927 aaPredicted RBP9.02□□□□□ -0.97
HMGXB3-204ENST00000513318 ANAPC4Q9UJX5 808 aa9.02□□□□□ -0.97
HMGXB3-204ENST00000513318 CYP2D7A0A087X1C5 515 aa9.01□□□□□ -0.97
HMGXB3-204ENST00000513318 UNCXA6NJT0 531 aa9.01□□□□□ -0.97
HMGXB3-204ENST00000513318 FAM196BA6NMK8 535 aa9.01□□□□□ -0.97
HMGXB3-204ENST00000513318 ZNF213O14771 459 aa9.01□□□□□ -0.97
HMGXB3-204ENST00000513318 PCP11498 1178 aaKnown RBP9.01□□□□□ -0.97
HMGXB3-204ENST00000513318 IREB2P48200 963 aaKnown RBP9.01□□□□□ -0.97
HMGXB3-204ENST00000513318 DSG2Q14126 1118 aa9.01□□□□□ -0.97
HMGXB3-204ENST00000513318 TTLL12Q14166 644 aaPredicted RBP9.01□□□□□ -0.97
HMGXB3-204ENST00000513318 MFSD10Q14728 455 aa9.01□□□□□ -0.97
HMGXB3-204ENST00000513318 C8orf34Q49A92 452 aa9.01□□□□□ -0.97
HMGXB3-204ENST00000513318 MIGA2Q7L4E1 593 aa9.01□□□□□ -0.97
HMGXB3-204ENST00000513318 ARMC9Q7Z3E5 817 aa9.01□□□□□ -0.97
HMGXB3-204ENST00000513318 C2orf69Q8N8R5 385 aa9.01□□□□□ -0.97
HMGXB3-204ENST00000513318 KLRG1Q96E93 195 aa9.01□□□□□ -0.97
HMGXB3-204ENST00000513318 ZNF287Q9HBT7 754 aa9.01□□□□□ -0.97
HMGXB3-204ENST00000513318 ANGEL1Q9UNK9 670 aaKnown RBP9.01□□□□□ -0.97
HMGXB3-204ENST00000513318 RBM8AQ9Y5S9 174 aaKnown RBP9.01□□□□□ -0.97
HMGXB3-204ENST00000513318 THSD7BQ9C0I4 1608 aa9.01□□□□□ -0.97
HMGXB3-204ENST00000513318 TMEM88BA6NKF7 163 aa9□□□□□ -0.97
HMGXB3-204ENST00000513318 USP2O75604 605 aaPredicted RBP9□□□□□ -0.97
HMGXB3-204ENST00000513318 CDK8P49336 464 aa9□□□□□ -0.97
HMGXB3-204ENST00000513318 APLP1P51693 650 aa9□□□□□ -0.97
HMGXB3-204ENST00000513318 FOXK1P85037 733 aa9□□□□□ -0.97
HMGXB3-204ENST00000513318 PDE4BQ07343 736 aa9□□□□□ -0.97
HMGXB3-204ENST00000513318 PRKG1Q13976 671 aa9□□□□□ -0.97
HMGXB3-204ENST00000513318 RNF20Q5VTR2 975 aa9□□□□□ -0.97
HMGXB3-204ENST00000513318 CST9Q5W186 159 aa9□□□□□ -0.97
HMGXB3-204ENST00000513318 TATDN1Q6P1N9 297 aa9□□□□□ -0.97
HMGXB3-204ENST00000513318 ANKRD13AQ8IZ07 590 aa9□□□□□ -0.97
HMGXB3-204ENST00000513318 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9□□□□□ -0.97
HMGXB3-204ENST00000513318 STAG1Q8WVM7 1258 aa9□□□□□ -0.97
HMGXB3-204ENST00000513318 WRNIP1Q96S55 665 aa9□□□□□ -0.97
HMGXB3-204ENST00000513318 RNF41Q9H4P4 317 aaPredicted RBP9□□□□□ -0.97
HMGXB3-204ENST00000513318 ZNF112Q9UJU3 913 aa9□□□□□ -0.97
HMGXB3-204ENST00000513318 COL11A1P12107 1806 aaPredicted RBP8.99□□□□□ -0.97
HMGXB3-204ENST00000513318 PHF20L1A8MW92 1017 aa8.99□□□□□ -0.97
HMGXB3-204ENST00000513318 SMIM22K7EJ46 135 aa8.99□□□□□ -0.97
HMGXB3-204ENST00000513318 ORC4O43929 436 aa8.99□□□□□ -0.97
HMGXB3-204ENST00000513318 CTNND1O60716 968 aaKnown RBP8.99□□□□□ -0.97
HMGXB3-204ENST00000513318 CYP21A2P08686 494 aa8.99□□□□□ -0.97
HMGXB3-204ENST00000513318 FGRP09769 529 aa8.99□□□□□ -0.97
HMGXB3-204ENST00000513318 SHMT1P34896 483 aa8.99□□□□□ -0.97
HMGXB3-204ENST00000513318 NT5C2P49902 561 aa8.99□□□□□ -0.97
HMGXB3-204ENST00000513318 HAND2P61296 217 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms