RNA–Protein interactions for RNA: ENST00000513064.1

CHD1-210, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-210ENST00000513064 HTR3BO95264 441 aa7.59□□□□□ -1.19
CHD1-210ENST00000513064 MED26O95402 600 aa7.59□□□□□ -1.19
CHD1-210ENST00000513064 GRIK1P39086 918 aa7.59□□□□□ -1.19
CHD1-210ENST00000513064 PRAMEF13Q5VWM6 474 aa7.59□□□□□ -1.19
CHD1-210ENST00000513064 SLITRK4Q8IW52 837 aa7.59□□□□□ -1.19
CHD1-210ENST00000513064 TMEM87BQ96K49 555 aa7.59□□□□□ -1.19
CHD1-210ENST00000513064 BRMS1Q9HCU9 246 aa7.59□□□□□ -1.19
CHD1-210ENST00000513064 CYP26A1O43174 497 aa7.58□□□□□ -1.2
CHD1-210ENST00000513064 GRIN3BO60391 1043 aa7.58□□□□□ -1.2
CHD1-210ENST00000513064 SLITRK5O94991 958 aa7.58□□□□□ -1.2
CHD1-210ENST00000513064 ATE1O95260 518 aa7.58□□□□□ -1.2
CHD1-210ENST00000513064 HOXA10P31260 410 aaPredicted RBP7.58□□□□□ -1.2
CHD1-210ENST00000513064 LRP8Q14114 963 aa7.58□□□□□ -1.2
CHD1-210ENST00000513064 SEZ6Q53EL9 994 aa7.58□□□□□ -1.2
CHD1-210ENST00000513064 REXO1Q8N1G1 1221 aaKnown RBP7.58□□□□□ -1.2
CHD1-210ENST00000513064 EHMT1Q9H9B1 1298 aa7.58□□□□□ -1.2
CHD1-210ENST00000513064 REV1Q9UBZ9 1251 aa7.58□□□□□ -1.2
CHD1-210ENST00000513064 EOMESO95936 686 aa7.57□□□□□ -1.2
CHD1-210ENST00000513064 RAD51AP2Q09MP3 1159 aa7.57□□□□□ -1.2
CHD1-210ENST00000513064 HEXIM2Q96MH2 286 aaKnown RBP7.57□□□□□ -1.2
CHD1-210ENST00000513064 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.57□□□□□ -1.2
CHD1-210ENST00000513064 KIAA1324LA8MWY0 1029 aaPredicted RBP7.56□□□□□ -1.2
CHD1-210ENST00000513064 E9PSI1 815 aa7.56□□□□□ -1.2
CHD1-210ENST00000513064 TCF3P15923 654 aa7.56□□□□□ -1.2
CHD1-210ENST00000513064 SSTR4P31391 388 aa7.56□□□□□ -1.2
CHD1-210ENST00000513064 MSMPQ1L6U9 139 aa7.56□□□□□ -1.2
CHD1-210ENST00000513064 ARTNQ5T4W7 220 aa7.56□□□□□ -1.2
CHD1-210ENST00000513064 SLFN12Q8IYM2 578 aa7.56□□□□□ -1.2
CHD1-210ENST00000513064 NKD1Q969G9 470 aa7.56□□□□□ -1.2
CHD1-210ENST00000513064 TGIF2Q9GZN2 237 aa7.56□□□□□ -1.2
CHD1-210ENST00000513064 MKNK2Q9HBH9 465 aa7.56□□□□□ -1.2
CHD1-210ENST00000513064 PCDHB14Q9Y5E9 798 aa7.56□□□□□ -1.2
CHD1-210ENST00000513064 IGF2BP3O00425 579 aaKnown RBP eCLIP7.55□□□□□ -1.2
CHD1-210ENST00000513064 HYAL3O43820 417 aaPredicted RBP7.55□□□□□ -1.2
CHD1-210ENST00000513064 SPINK2P20155 84 aa7.55□□□□□ -1.2
CHD1-210ENST00000513064 ZNF165P49910 485 aa7.55□□□□□ -1.2
CHD1-210ENST00000513064 YARSP54577 528 aaKnown RBP7.55□□□□□ -1.2
CHD1-210ENST00000513064 LETMD1Q6P1Q0 360 aa7.55□□□□□ -1.2
CHD1-210ENST00000513064 DTX1Q86Y01 620 aa7.55□□□□□ -1.2
CHD1-210ENST00000513064 RIN3Q8TB24 985 aa7.55□□□□□ -1.2
CHD1-210ENST00000513064 MIPEPQ99797 713 aa7.55□□□□□ -1.2
CHD1-210ENST00000513064 DPH2Q9BQC3 489 aaPredicted RBP7.55□□□□□ -1.2
CHD1-210ENST00000513064 LRRC4CQ9HCJ2 640 aa7.55□□□□□ -1.2
CHD1-210ENST00000513064 IGSF5Q9NSI5 407 aa7.55□□□□□ -1.2
CHD1-210ENST00000513064 GTF2IRD1Q9UHL9 959 aa7.55□□□□□ -1.2
CHD1-210ENST00000513064 UPK3BL1B0FP48 263 aa7.54□□□□□ -1.2
CHD1-210ENST00000513064 UPK3BL2E5RIL1 263 aa7.54□□□□□ -1.2
CHD1-210ENST00000513064 DNAJA2O60884 412 aa7.54□□□□□ -1.2
CHD1-210ENST00000513064 OXCT1P55809 520 aa7.54□□□□□ -1.2
CHD1-210ENST00000513064 CLCQ05315 142 aa7.54□□□□□ -1.2
CHD1-210ENST00000513064 PAK2Q13177 524 aa7.54□□□□□ -1.2
CHD1-210ENST00000513064 FAM13CQ8NE31 585 aa7.54□□□□□ -1.2
CHD1-210ENST00000513064 ZC3H7BQ9UGR2 993 aaKnown RBP7.54□□□□□ -1.2
CHD1-210ENST00000513064 SCO2A0A1W2PP80 73 aa7.53□□□□□ -1.2
CHD1-210ENST00000513064 CHURC1-FNTBB4DL54 471 aa7.53□□□□□ -1.2
CHD1-210ENST00000513064 MCM4P33991 863 aa7.53□□□□□ -1.2
CHD1-210ENST00000513064 GJA8P48165 433 aa7.53□□□□□ -1.2
CHD1-210ENST00000513064 MLECQ14165 292 aa7.53□□□□□ -1.2
CHD1-210ENST00000513064 FAM181AQ8N9Y4 354 aa7.53□□□□□ -1.2
CHD1-210ENST00000513064 XAGE3Q8WTP9 111 aa7.53□□□□□ -1.2
CHD1-210ENST00000513064 CYB5D2Q8WUJ1 264 aa7.53□□□□□ -1.2
CHD1-210ENST00000513064 SPATA32Q96LK8 384 aa7.53□□□□□ -1.2
CHD1-210ENST00000513064 PRDM5Q9NQX1 630 aaPredicted RBP7.53□□□□□ -1.2
CHD1-210ENST00000513064 MAPK8IP1Q9UQF2 711 aa7.53□□□□□ -1.2
CHD1-210ENST00000513064 U3KQE9 123 aa7.53□□□□□ -1.2
CHD1-210ENST00000513064 CNTNAP4Q9C0A0 1308 aa7.52□□□□□ -1.2
CHD1-210ENST00000513064 SLC22A31A6NKX4 558 aa7.52□□□□□ -1.21
CHD1-210ENST00000513064 ZNF746Q6NUN9 644 aaPredicted RBP7.52□□□□□ -1.21
CHD1-210ENST00000513064 GK5Q6ZS86 529 aa7.52□□□□□ -1.21
CHD1-210ENST00000513064 DNAJB8Q8NHS0 232 aa7.52□□□□□ -1.21
CHD1-210ENST00000513064 RASGRP4Q8TDF6 673 aa7.52□□□□□ -1.21
CHD1-210ENST00000513064 ZFP64Q9NPA5 681 aa7.52□□□□□ -1.21
CHD1-210ENST00000513064 PCMTD2Q9NV79 361 aa7.52□□□□□ -1.21
CHD1-210ENST00000513064 GMIPQ9P107 970 aa7.52□□□□□ -1.21
CHD1-210ENST00000513064 CEP131Q9UPN4 1083 aa7.52□□□□□ -1.21
CHD1-210ENST00000513064 PRNPP04156 253 aa7.51□□□□□ -1.21
CHD1-210ENST00000513064 COL9A2Q14055 689 aaPredicted RBP7.51□□□□□ -1.21
CHD1-210ENST00000513064 C22orf34Q6ZV56 151 aa7.51□□□□□ -1.21
CHD1-210ENST00000513064 Q8N3U1 123 aa7.51□□□□□ -1.21
CHD1-210ENST00000513064 NETO1Q8TDF5 533 aa7.51□□□□□ -1.21
CHD1-210ENST00000513064 PPP1R13LQ8WUF5 828 aa7.51□□□□□ -1.21
CHD1-210ENST00000513064 GPRASP2Q96D09 838 aa7.51□□□□□ -1.21
CHD1-210ENST00000513064 ACBD3Q9H3P7 528 aa7.51□□□□□ -1.21
CHD1-210ENST00000513064 BSDC1Q9NW68 430 aaPredicted RBP7.51□□□□□ -1.21
CHD1-210ENST00000513064 KLHL3Q9UH77 587 aa7.51□□□□□ -1.21
CHD1-210ENST00000513064 TPX2Q9ULW0 747 aaKnown RBP7.51□□□□□ -1.21
CHD1-210ENST00000513064 ERCC5P28715 1186 aaPredicted RBP7.5□□□□□ -1.21
CHD1-210ENST00000513064 LRRFIP1Q32MZ4 808 aaKnown RBP7.5□□□□□ -1.21
CHD1-210ENST00000513064 CDCP2Q5VXM1 449 aa7.5□□□□□ -1.21
CHD1-210ENST00000513064 CDH24Q86UP0 819 aa7.5□□□□□ -1.21
CHD1-210ENST00000513064 PLD6Q8N2A8 252 aaKnown RBP7.5□□□□□ -1.21
CHD1-210ENST00000513064 COX4I2Q96KJ9 171 aa7.5□□□□□ -1.21
CHD1-210ENST00000513064 TNKS2Q9H2K2 1166 aa7.5□□□□□ -1.21
CHD1-210ENST00000513064 CCSER2Q9H7U1 834 aa7.5□□□□□ -1.21
CHD1-210ENST00000513064 ZNRF3Q9ULT6 936 aa7.5□□□□□ -1.21
CHD1-210ENST00000513064 PLAGL2Q9UPG8 496 aa7.5□□□□□ -1.21
CHD1-210ENST00000513064 MEIS3P2A8K0S8 358 aa7.49□□□□□ -1.21
CHD1-210ENST00000513064 CEACAM5P06731 702 aa7.49□□□□□ -1.21
CHD1-210ENST00000513064 ZNF865P0CJ78 1059 aaPredicted RBP7.49□□□□□ -1.21
CHD1-210ENST00000513064 IMPDH2P12268 514 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms