RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 UBE4AQ14139 1066 aa11.84□□□□□ -0.51
TRIO-220ENST00000512979 ANKMY2Q8IV38 441 aa11.84□□□□□ -0.51
TRIO-220ENST00000512979 FAM163AQ96GL9 167 aaPredicted RBP11.84□□□□□ -0.51
TRIO-220ENST00000512979 PUS3Q9BZE2 481 aaKnown RBP11.84□□□□□ -0.51
TRIO-220ENST00000512979 MCOLN1Q9GZU1 580 aa11.84□□□□□ -0.51
TRIO-220ENST00000512979 BICC1Q9H694 974 aaKnown RBP11.84□□□□□ -0.51
TRIO-220ENST00000512979 CASP8AP2Q9UKL3 1982 aa11.83□□□□□ -0.52
TRIO-220ENST00000512979 GYG1P46976 350 aa11.83□□□□□ -0.52
TRIO-220ENST00000512979 DGKZQ13574 1117 aa11.83□□□□□ -0.52
TRIO-220ENST00000512979 PRKG1Q13976 671 aa11.83□□□□□ -0.52
TRIO-220ENST00000512979 EML3Q32P44 896 aa11.83□□□□□ -0.52
TRIO-220ENST00000512979 MAP7D1Q3KQU3 841 aa11.83□□□□□ -0.52
TRIO-220ENST00000512979 TSGA10IPQ3SY00 556 aa11.83□□□□□ -0.52
TRIO-220ENST00000512979 RABL6Q3YEC7 729 aaPredicted RBP11.83□□□□□ -0.52
TRIO-220ENST00000512979 CFAP100Q494V2 611 aa11.83□□□□□ -0.52
TRIO-220ENST00000512979 ARMC9Q7Z3E5 817 aa11.83□□□□□ -0.52
TRIO-220ENST00000512979 ZBTB33Q86T24 672 aa11.83□□□□□ -0.52
TRIO-220ENST00000512979 PCDHAC2Q9Y5I4 1007 aa11.83□□□□□ -0.52
TRIO-220ENST00000512979 A0A1B0GUL6 1792 aa11.82□□□□□ -0.52
TRIO-220ENST00000512979 CLRN2A0PK11 232 aa11.82□□□□□ -0.52
TRIO-220ENST00000512979 MYO1BO43795 1136 aa11.82□□□□□ -0.52
TRIO-220ENST00000512979 HIBADHP31937 336 aaKnown RBP11.82□□□□□ -0.52
TRIO-220ENST00000512979 TRAF7Q6Q0C0 670 aa11.82□□□□□ -0.52
TRIO-220ENST00000512979 ANKRD44Q8N8A2 993 aa11.82□□□□□ -0.52
TRIO-220ENST00000512979 TDRD7Q8NHU6 1098 aaKnown RBP11.82□□□□□ -0.52
TRIO-220ENST00000512979 CLP1Q92989 425 aaKnown RBP11.82□□□□□ -0.52
TRIO-220ENST00000512979 UNC93B1Q9H1C4 597 aa11.82□□□□□ -0.52
TRIO-220ENST00000512979 DEFB129Q9H1M3 183 aa11.82□□□□□ -0.52
TRIO-220ENST00000512979 RIPOR2Q9Y4F9 1068 aa11.82□□□□□ -0.52
TRIO-220ENST00000512979 FAM205AQ6ZU69 1335 aa11.82□□□□□ -0.52
TRIO-220ENST00000512979 MROH5Q6ZUA9 1318 aa11.82□□□□□ -0.52
TRIO-220ENST00000512979 TLL1O43897 1013 aa11.81□□□□□ -0.52
TRIO-220ENST00000512979 ARID4AP29374 1257 aaPredicted RBP11.81□□□□□ -0.52
TRIO-220ENST00000512979 RBM5P52756 815 aaKnown RBP eCLIP11.81□□□□□ -0.52
TRIO-220ENST00000512979 PTPN12Q05209 780 aaKnown RBP11.81□□□□□ -0.52
TRIO-220ENST00000512979 DPYDQ12882 1025 aa11.81□□□□□ -0.52
TRIO-220ENST00000512979 LRRC24Q50LG9 513 aa11.81□□□□□ -0.52
TRIO-220ENST00000512979 METTL24Q5JXM2 366 aa11.81□□□□□ -0.52
TRIO-220ENST00000512979 MFSD14BQ5SR56 506 aa11.81□□□□□ -0.52
TRIO-220ENST00000512979 PTCRAQ6ISU1 281 aaPredicted RBP11.81□□□□□ -0.52
TRIO-220ENST00000512979 SH3BP5LQ7L8J4 393 aa11.81□□□□□ -0.52
TRIO-220ENST00000512979 FAM84BQ96KN1 310 aaPredicted RBP11.81□□□□□ -0.52
TRIO-220ENST00000512979 PRMT6Q96LA8 375 aaPredicted RBP11.81□□□□□ -0.52
TRIO-220ENST00000512979 VEZTQ9HBM0 779 aa11.81□□□□□ -0.52
TRIO-220ENST00000512979 SMC4Q9NTJ3 1288 aa11.81□□□□□ -0.52
TRIO-220ENST00000512979 ANGEL1Q9UNK9 670 aaKnown RBP11.81□□□□□ -0.52
TRIO-220ENST00000512979 COL1A1P02452 1464 aaPredicted RBP11.81□□□□□ -0.52
TRIO-220ENST00000512979 CLDN10P78369 228 aa11.8□□□□□ -0.52
TRIO-220ENST00000512979 ALDH1L2Q3SY69 923 aa11.8□□□□□ -0.52
TRIO-220ENST00000512979 VPS37DQ86XT2 251 aa11.8□□□□□ -0.52
TRIO-220ENST00000512979 KLHDC4Q8TBB5 520 aa11.8□□□□□ -0.52
TRIO-220ENST00000512979 USP44Q9H0E7 712 aa11.8□□□□□ -0.52
TRIO-220ENST00000512979 TTF2Q9UNY4 1162 aaKnown RBP11.8□□□□□ -0.52
TRIO-220ENST00000512979 FZD1Q9UP38 647 aa11.8□□□□□ -0.52
TRIO-220ENST00000512979 PPP2R3BQ9Y5P8 575 aa11.8□□□□□ -0.52
TRIO-220ENST00000512979 AOX1Q06278 1338 aa11.8□□□□□ -0.52
TRIO-220ENST00000512979 CHAF1AQ13111 956 aaPredicted RBP11.79□□□□□ -0.52
TRIO-220ENST00000512979 LDLRAD1Q5T700 205 aa11.79□□□□□ -0.52
TRIO-220ENST00000512979 TRIM50Q86XT4 487 aa11.79□□□□□ -0.52
TRIO-220ENST00000512979 DNAAF2Q9NVR5 837 aaKnown RBP11.79□□□□□ -0.52
TRIO-220ENST00000512979 IQSEC3Q9UPP2 1182 aaPredicted RBP11.79□□□□□ -0.52
TRIO-220ENST00000512979 AKAP11Q9UKA4 1901 aa11.78□□□□□ -0.52
TRIO-220ENST00000512979 PPP1R12BO60237 982 aaPredicted RBP11.78□□□□□ -0.52
TRIO-220ENST00000512979 FRAT2O75474 233 aaPredicted RBP11.78□□□□□ -0.52
TRIO-220ENST00000512979 PDE8BO95263 885 aa11.78□□□□□ -0.52
TRIO-220ENST00000512979 ADH1BP00325 375 aa11.78□□□□□ -0.52
TRIO-220ENST00000512979 SREBF2Q12772 1141 aa11.78□□□□□ -0.52
TRIO-220ENST00000512979 SUPT20HL1Q3ZLR7 823 aa11.78□□□□□ -0.52
TRIO-220ENST00000512979 CAVIN4Q5BKX8 364 aa11.78□□□□□ -0.52
TRIO-220ENST00000512979 FBXO33Q7Z6M2 555 aa11.78□□□□□ -0.52
TRIO-220ENST00000512979 TRMT2AQ8IZ69 625 aaKnown RBP11.78□□□□□ -0.52
TRIO-220ENST00000512979 VGLL2Q8N8G2 317 aa11.78□□□□□ -0.52
TRIO-220ENST00000512979 NOD1Q9Y239 953 aa11.78□□□□□ -0.52
TRIO-220ENST00000512979 SSC5DA1L4H1 1573 aa11.77□□□□□ -0.53
TRIO-220ENST00000512979 MAGEB6P1A0A0J9YX57 407 aa11.77□□□□□ -0.53
TRIO-220ENST00000512979 TBC1D8O95759 1140 aa11.77□□□□□ -0.53
TRIO-220ENST00000512979 CRKP46108 304 aa11.77□□□□□ -0.53
TRIO-220ENST00000512979 TM4SF4P48230 202 aa11.77□□□□□ -0.53
TRIO-220ENST00000512979 TNFAIP1Q13829 316 aa11.77□□□□□ -0.53
TRIO-220ENST00000512979 RASA3Q14644 834 aa11.77□□□□□ -0.53
TRIO-220ENST00000512979 MAP3K11Q16584 847 aa11.77□□□□□ -0.53
TRIO-220ENST00000512979 SWI5Q1ZZU3 235 aa11.77□□□□□ -0.53
TRIO-220ENST00000512979 NBPF12Q5TAG4 269 aaPredicted RBP11.77□□□□□ -0.53
TRIO-220ENST00000512979 SPRYD7Q5W111 196 aa11.77□□□□□ -0.53
TRIO-220ENST00000512979 SLC10A4Q96EP9 437 aa11.77□□□□□ -0.53
TRIO-220ENST00000512979 ZNF70Q9UC06 446 aaPredicted RBP11.77□□□□□ -0.53
TRIO-220ENST00000512979 DOLKQ9UPQ8 538 aa11.77□□□□□ -0.53
TRIO-220ENST00000512979 CCER2I3L3R5 266 aa11.76□□□□□ -0.53
TRIO-220ENST00000512979 EYA2O00167 538 aa11.76□□□□□ -0.53
TRIO-220ENST00000512979 IFIT1P09914 478 aaKnown RBP11.76□□□□□ -0.53
TRIO-220ENST00000512979 CT47B1P0C2W7 299 aaPredicted RBP11.76□□□□□ -0.53
TRIO-220ENST00000512979 IREB2P48200 963 aaKnown RBP11.76□□□□□ -0.53
TRIO-220ENST00000512979 RFX5P48382 616 aaPredicted RBP11.76□□□□□ -0.53
TRIO-220ENST00000512979 ATP1A2P50993 1020 aa11.76□□□□□ -0.53
TRIO-220ENST00000512979 PUM3Q15397 648 aaKnown RBP11.76□□□□□ -0.53
TRIO-220ENST00000512979 GRIK5Q16478 980 aa11.76□□□□□ -0.53
TRIO-220ENST00000512979 CTU1Q7Z7A3 348 aaKnown RBP11.76□□□□□ -0.53
TRIO-220ENST00000512979 DZIP1LQ8IYY4 767 aaKnown RBP11.76□□□□□ -0.53
TRIO-220ENST00000512979 TBC1D22AQ8WUA7 517 aa11.76□□□□□ -0.53
TRIO-220ENST00000512979 CLMNQ96JQ2 1002 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms