RNA–Protein interactions for RNA: ENST00000512901.6

LINC01550-203, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 2,192 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-203ENST00000512901 DCPSQ96C86 337 aaKnown RBP12.31□□□□□ -0.44
LINC01550-203ENST00000512901 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.31□□□□□ -0.44
LINC01550-203ENST00000512901 TAOK2Q9UL54 1235 aa12.31□□□□□ -0.44
LINC01550-203ENST00000512901 NAP1L2Q9ULW6 460 aaPredicted RBP12.31□□□□□ -0.44
LINC01550-203ENST00000512901 POLR2AP24928 1970 aaKnown RBP12.31□□□□□ -0.44
LINC01550-203ENST00000512901 SLC4A3P48751 1232 aa12.3□□□□□ -0.44
LINC01550-203ENST00000512901 WTAPQ15007 396 aa12.3□□□□□ -0.44
LINC01550-203ENST00000512901 NFXL1Q6ZNB6 911 aa12.3□□□□□ -0.44
LINC01550-203ENST00000512901 TAF1DQ9H5J8 278 aaPredicted RBP12.3□□□□□ -0.44
LINC01550-203ENST00000512901 HERC5Q9UII4 1024 aaKnown RBP12.3□□□□□ -0.44
LINC01550-203ENST00000512901 ANGEL1Q9UNK9 670 aaKnown RBP12.3□□□□□ -0.44
LINC01550-203ENST00000512901 PITPNM2Q9BZ72 1349 aa12.3□□□□□ -0.44
LINC01550-203ENST00000512901 SH2B2O14492 632 aaPredicted RBP12.3□□□□□ -0.44
LINC01550-203ENST00000512901 HSP90AA1P07900 732 aaKnown RBP12.3□□□□□ -0.44
LINC01550-203ENST00000512901 SLURP2P0DP57 97 aa12.3□□□□□ -0.44
LINC01550-203ENST00000512901 SHMT1P34896 483 aa12.3□□□□□ -0.44
LINC01550-203ENST00000512901 APOBRQ0VD83 1088 aa12.3□□□□□ -0.44
LINC01550-203ENST00000512901 PNMA8AQ86V59 439 aaPredicted RBP12.3□□□□□ -0.44
LINC01550-203ENST00000512901 ZSCAN31Q96LW9 406 aaPredicted RBP12.3□□□□□ -0.44
LINC01550-203ENST00000512901 ZSCAN10Q96SZ4 725 aaPredicted RBP12.3□□□□□ -0.44
LINC01550-203ENST00000512901 MTA3Q9BTC8 594 aa12.3□□□□□ -0.44
LINC01550-203ENST00000512901 DNAJC18Q9H819 358 aa12.3□□□□□ -0.44
LINC01550-203ENST00000512901 GPHNQ9NQX3 736 aaPredicted RBP12.3□□□□□ -0.44
LINC01550-203ENST00000512901 TNKSO95271 1327 aa12.3□□□□□ -0.44
LINC01550-203ENST00000512901 MPHOSPH10O00566 681 aaKnown RBP12.29□□□□□ -0.44
LINC01550-203ENST00000512901 SULF1Q8IWU6 871 aa12.29□□□□□ -0.44
LINC01550-203ENST00000512901 CDAN1Q8IWY9 1227 aa12.29□□□□□ -0.44
LINC01550-203ENST00000512901 TMX3Q96JJ7 454 aa12.29□□□□□ -0.44
LINC01550-203ENST00000512901 AGXT2Q9BYV1 514 aa12.29□□□□□ -0.44
LINC01550-203ENST00000512901 PPP2R3BQ9Y5P8 575 aa12.29□□□□□ -0.44
LINC01550-203ENST00000512901 CCDC69A6NI79 296 aa12.29□□□□□ -0.44
LINC01550-203ENST00000512901 CERKLQ49MI3 558 aaPredicted RBP12.29□□□□□ -0.44
LINC01550-203ENST00000512901 CCDC178Q5BJE1 867 aa12.29□□□□□ -0.44
LINC01550-203ENST00000512901 MIGA2Q7L4E1 593 aa12.29□□□□□ -0.44
LINC01550-203ENST00000512901 METTL16Q86W50 562 aaKnown RBP12.29□□□□□ -0.44
LINC01550-203ENST00000512901 FBXL16Q8N461 479 aa12.29□□□□□ -0.44
LINC01550-203ENST00000512901 IGDCC4Q8TDY8 1250 aa12.29□□□□□ -0.44
LINC01550-203ENST00000512901 HOOK2Q96ED9 719 aa12.29□□□□□ -0.44
LINC01550-203ENST00000512901 CCDC17Q96LX7 622 aa12.29□□□□□ -0.44
LINC01550-203ENST00000512901 TEPSINQ96N21 525 aa12.29□□□□□ -0.44
LINC01550-203ENST00000512901 LY9Q9HBG7 655 aa12.29□□□□□ -0.44
LINC01550-203ENST00000512901 TPCN1Q9ULQ1 816 aa12.29□□□□□ -0.44
LINC01550-203ENST00000512901 KLF18A0A0U1RQI7 1052 aa12.28□□□□□ -0.44
LINC01550-203ENST00000512901 POTECB2RU33 542 aa12.28□□□□□ -0.44
LINC01550-203ENST00000512901 NMT2O60551 498 aa12.28□□□□□ -0.44
LINC01550-203ENST00000512901 AKR1B1P15121 316 aa12.28□□□□□ -0.44
LINC01550-203ENST00000512901 LIFRP42702 1097 aa12.28□□□□□ -0.44
LINC01550-203ENST00000512901 IFIT1BQ5T764 474 aaKnown RBP12.28□□□□□ -0.44
LINC01550-203ENST00000512901 TMTC2Q8N394 836 aa12.28□□□□□ -0.44
LINC01550-203ENST00000512901 NEDD1Q8NHV4 660 aa12.28□□□□□ -0.44
LINC01550-203ENST00000512901 ZC3H15Q8WU90 426 aaKnown RBP12.28□□□□□ -0.44
LINC01550-203ENST00000512901 SH2B1Q9NRF2 756 aaPredicted RBP12.28□□□□□ -0.44
LINC01550-203ENST00000512901 CLEC11AQ9Y240 323 aa12.28□□□□□ -0.44
LINC01550-203ENST00000512901 TBC1D12O60347 775 aa12.28□□□□□ -0.44
LINC01550-203ENST00000512901 VEGFAP15692 232 aaPredicted RBP12.28□□□□□ -0.44
LINC01550-203ENST00000512901 STK3Q13188 491 aa12.28□□□□□ -0.44
LINC01550-203ENST00000512901 NBPF12Q5TAG4 269 aaPredicted RBP12.28□□□□□ -0.44
LINC01550-203ENST00000512901 TATDN1Q6P1N9 297 aa12.28□□□□□ -0.44
LINC01550-203ENST00000512901 SYNE3Q6ZMZ3 975 aa12.28□□□□□ -0.44
LINC01550-203ENST00000512901 ENAHQ8N8S7 591 aaPredicted RBP12.28□□□□□ -0.44
LINC01550-203ENST00000512901 SPRYD3Q8NCJ5 442 aa12.28□□□□□ -0.44
LINC01550-203ENST00000512901 ZNF526Q8TF50 670 aaPredicted RBP12.28□□□□□ -0.44
LINC01550-203ENST00000512901 RRAGCQ9HB90 399 aa12.28□□□□□ -0.44
LINC01550-203ENST00000512901 PGAP2Q9UHJ9 254 aa12.28□□□□□ -0.44
LINC01550-203ENST00000512901 GDF11O95390 407 aa12.27□□□□□ -0.45
LINC01550-203ENST00000512901 LARGE1O95461 756 aa12.27□□□□□ -0.45
LINC01550-203ENST00000512901 SEC23AQ15436 765 aa12.27□□□□□ -0.45
LINC01550-203ENST00000512901 ME3Q16798 604 aa12.27□□□□□ -0.45
LINC01550-203ENST00000512901 PRAMEF18Q5VWM3 479 aa12.27□□□□□ -0.45
LINC01550-203ENST00000512901 DCAF15Q66K64 600 aa12.27□□□□□ -0.45
LINC01550-203ENST00000512901 KRT26Q7Z3Y9 468 aa12.27□□□□□ -0.45
LINC01550-203ENST00000512901 SLKQ9H2G2 1235 aaPredicted RBP12.27□□□□□ -0.45
LINC01550-203ENST00000512901 CABP5Q9NP86 173 aa12.27□□□□□ -0.45
LINC01550-203ENST00000512901 TCP11L1Q9NUJ3 509 aa12.27□□□□□ -0.45
LINC01550-203ENST00000512901 STX8Q9UNK0 236 aa12.27□□□□□ -0.45
LINC01550-203ENST00000512901 SLC12A7Q9Y666 1083 aa12.27□□□□□ -0.45
LINC01550-203ENST00000512901 GOLGA8BA8MQT2 603 aa12.26□□□□□ -0.45
LINC01550-203ENST00000512901 ABCB5Q2M3G0 1257 aa12.26□□□□□ -0.45
LINC01550-203ENST00000512901 SUPT20HL1Q3ZLR7 823 aa12.26□□□□□ -0.45
LINC01550-203ENST00000512901 SENP2Q9HC62 589 aa12.26□□□□□ -0.45
LINC01550-203ENST00000512901 BRPF3Q9ULD4 1205 aa12.26□□□□□ -0.45
LINC01550-203ENST00000512901 PLIN4Q96Q06 1357 aa12.26□□□□□ -0.45
LINC01550-203ENST00000512901 ADM5C9JUS6 153 aa12.26□□□□□ -0.45
LINC01550-203ENST00000512901 SGMS1Q86VZ5 419 aa12.26□□□□□ -0.45
LINC01550-203ENST00000512901 DGKHQ86XP1 1220 aa12.26□□□□□ -0.45
LINC01550-203ENST00000512901 CCDC83Q8IWF9 413 aa12.26□□□□□ -0.45
LINC01550-203ENST00000512901 ZNF274Q96GC6 653 aaPredicted RBP12.26□□□□□ -0.45
LINC01550-203ENST00000512901 KAT14Q9H8E8 782 aa12.26□□□□□ -0.45
LINC01550-203ENST00000512901 IL17RBQ9NRM6 502 aa12.26□□□□□ -0.45
LINC01550-203ENST00000512901 FOXD4L1Q9NU39 408 aa12.26□□□□□ -0.45
LINC01550-203ENST00000512901 ZBTB43O43298 467 aa12.25□□□□□ -0.45
LINC01550-203ENST00000512901 PDIA3P30101 505 aaKnown RBP12.25□□□□□ -0.45
LINC01550-203ENST00000512901 EVCP57679 992 aa12.25□□□□□ -0.45
LINC01550-203ENST00000512901 APOA5Q6Q788 366 aa12.25□□□□□ -0.45
LINC01550-203ENST00000512901 TMEM179Q6ZVK1 233 aa12.25□□□□□ -0.45
LINC01550-203ENST00000512901 CATIPQ7Z7H3 387 aa12.25□□□□□ -0.45
LINC01550-203ENST00000512901 MICU3Q86XE3 530 aa12.25□□□□□ -0.45
LINC01550-203ENST00000512901 RAB11FIP4Q86YS3 637 aa12.25□□□□□ -0.45
LINC01550-203ENST00000512901 NECAB1Q8N987 351 aa12.25□□□□□ -0.45
LINC01550-203ENST00000512901 CEP95Q96GE4 821 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms