RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 USP17L11C9JVI0 530 aa8.95□□□□□ -0.98
RFC1-215ENST00000512881 USP17L21D6R901 530 aa8.95□□□□□ -0.98
RFC1-215ENST00000512881 USP17L18D6R9N7 530 aa8.95□□□□□ -0.98
RFC1-215ENST00000512881 USP17L22D6RA61 530 aa8.95□□□□□ -0.98
RFC1-215ENST00000512881 USP17L17D6RBQ6 530 aa8.95□□□□□ -0.98
RFC1-215ENST00000512881 USP17L19D6RCP7 530 aa8.95□□□□□ -0.98
RFC1-215ENST00000512881 USP17L20D6RJB6 530 aa8.95□□□□□ -0.98
RFC1-215ENST00000512881 PPP1R12BO60237 982 aaPredicted RBP8.95□□□□□ -0.98
RFC1-215ENST00000512881 ANXA1P04083 346 aa8.95□□□□□ -0.98
RFC1-215ENST00000512881 HOXA10P31260 410 aaPredicted RBP8.95□□□□□ -0.98
RFC1-215ENST00000512881 DGKGP49619 791 aa8.95□□□□□ -0.98
RFC1-215ENST00000512881 USP17L24Q0WX57 530 aa8.95□□□□□ -0.98
RFC1-215ENST00000512881 PLA2G4EQ3MJ16 856 aa8.95□□□□□ -0.98
RFC1-215ENST00000512881 CRY2Q49AN0 593 aa8.95□□□□□ -0.98
RFC1-215ENST00000512881 RTKN2Q8IZC4 609 aa8.95□□□□□ -0.98
RFC1-215ENST00000512881 HSH2DQ96JZ2 352 aa8.95□□□□□ -0.98
RFC1-215ENST00000512881 VIRMAQ69YN4 1812 aaKnown RBP8.95□□□□□ -0.98
RFC1-215ENST00000512881 ARFGEF1Q9Y6D6 1849 aa8.95□□□□□ -0.98
RFC1-215ENST00000512881 UBN2Q6ZU65 1347 aa8.95□□□□□ -0.98
RFC1-215ENST00000512881 SCN7AQ01118 1682 aa8.94□□□□□ -0.98
RFC1-215ENST00000512881 FAM196BA6NMK8 535 aa8.94□□□□□ -0.98
RFC1-215ENST00000512881 DDNO94850 711 aaPredicted RBP8.94□□□□□ -0.98
RFC1-215ENST00000512881 AMPD1P23109 780 aa8.94□□□□□ -0.98
RFC1-215ENST00000512881 PCBP4P57723 403 aaKnown RBP8.94□□□□□ -0.98
RFC1-215ENST00000512881 HTRA3P83110 453 aa8.94□□□□□ -0.98
RFC1-215ENST00000512881 FKBP4Q02790 459 aaKnown RBP eCLIP8.94□□□□□ -0.98
RFC1-215ENST00000512881 KRT24Q2M2I5 525 aa8.94□□□□□ -0.98
RFC1-215ENST00000512881 PARP10Q53GL7 1025 aa8.94□□□□□ -0.98
RFC1-215ENST00000512881 COPS6Q7L5N1 327 aa8.94□□□□□ -0.98
RFC1-215ENST00000512881 PPP1R42Q7Z4L9 355 aa8.94□□□□□ -0.98
RFC1-215ENST00000512881 SYNE4Q8N205 404 aa8.94□□□□□ -0.98
RFC1-215ENST00000512881 STAG2Q8N3U4 1231 aa8.94□□□□□ -0.98
RFC1-215ENST00000512881 XAGE3Q8WTP9 111 aa8.94□□□□□ -0.98
RFC1-215ENST00000512881 RPGRQ92834 1020 aaKnown RBP8.94□□□□□ -0.98
RFC1-215ENST00000512881 BTBD6Q96KE9 485 aa8.94□□□□□ -0.98
RFC1-215ENST00000512881 C2orf49Q9BVC5 232 aaPredicted RBP8.94□□□□□ -0.98
RFC1-215ENST00000512881 ZNF277Q9NRM2 450 aaPredicted RBP8.94□□□□□ -0.98
RFC1-215ENST00000512881 CHMP3Q9Y3E7 222 aa8.94□□□□□ -0.98
RFC1-215ENST00000512881 HCN4Q9Y3Q4 1203 aa8.94□□□□□ -0.98
RFC1-215ENST00000512881 RBM19Q9Y4C8 960 aaKnown RBP8.94□□□□□ -0.98
RFC1-215ENST00000512881 NTSR2O95665 410 aa8.93□□□□□ -0.98
RFC1-215ENST00000512881 COL8A1P27658 744 aa8.93□□□□□ -0.98
RFC1-215ENST00000512881 DPYDQ12882 1025 aa8.93□□□□□ -0.98
RFC1-215ENST00000512881 AIMP1Q12904 312 aaKnown RBP8.93□□□□□ -0.98
RFC1-215ENST00000512881 SLC10A5Q5PT55 438 aa8.93□□□□□ -0.98
RFC1-215ENST00000512881 LINC00114Q6XXX2 140 aa8.93□□□□□ -0.98
RFC1-215ENST00000512881 CHSY3Q70JA7 882 aa8.93□□□□□ -0.98
RFC1-215ENST00000512881 RBM17Q96I25 401 aaKnown RBP8.93□□□□□ -0.98
RFC1-215ENST00000512881 MDFIQ99750 246 aa8.93□□□□□ -0.98
RFC1-215ENST00000512881 UTP14AQ9BVJ6 771 aaKnown RBP8.93□□□□□ -0.98
RFC1-215ENST00000512881 DDX21Q9NR30 783 aaKnown RBP eCLIP8.93□□□□□ -0.98
RFC1-215ENST00000512881 ABCC12Q96J65 1359 aa8.93□□□□□ -0.98
RFC1-215ENST00000512881 IBTKQ9P2D0 1353 aaPredicted RBP8.92□□□□□ -0.98
RFC1-215ENST00000512881 APAF1O14727 1248 aa8.92□□□□□ -0.98
RFC1-215ENST00000512881 IGHA1P01876 353 aa8.92□□□□□ -0.98
RFC1-215ENST00000512881 LMOD1P29536 600 aaPredicted RBP8.92□□□□□ -0.98
RFC1-215ENST00000512881 TYRO3Q06418 890 aa8.92□□□□□ -0.98
RFC1-215ENST00000512881 SFSWAPQ12872 951 aaKnown RBP8.92□□□□□ -0.98
RFC1-215ENST00000512881 TCIRG1Q13488 830 aa8.92□□□□□ -0.98
RFC1-215ENST00000512881 HSP90AB3PQ58FF7 597 aa8.92□□□□□ -0.98
RFC1-215ENST00000512881 ZNF280CQ8ND82 737 aa8.92□□□□□ -0.98
RFC1-215ENST00000512881 SCG3Q8WXD2 468 aaKnown RBP8.92□□□□□ -0.98
RFC1-215ENST00000512881 CRAMP1Q96RY5 1269 aa8.92□□□□□ -0.98
RFC1-215ENST00000512881 ANKRD31Q8N7Z5 1873 aa8.91□□□□□ -0.98
RFC1-215ENST00000512881 TCERG1O14776 1098 aaKnown RBP8.91□□□□□ -0.98
RFC1-215ENST00000512881 HOXB7P09629 217 aa8.91□□□□□ -0.98
RFC1-215ENST00000512881 IARSP41252 1262 aaKnown RBP8.91□□□□□ -0.98
RFC1-215ENST00000512881 DUSP27Q5VZP5 1158 aa8.91□□□□□ -0.98
RFC1-215ENST00000512881 NLRP10Q86W26 655 aa8.91□□□□□ -0.98
RFC1-215ENST00000512881 ANKMY2Q8IV38 441 aa8.91□□□□□ -0.98
RFC1-215ENST00000512881 ALDH16A1Q8IZ83 802 aa8.91□□□□□ -0.98
RFC1-215ENST00000512881 SUSD3Q96L08 255 aa8.91□□□□□ -0.98
RFC1-215ENST00000512881 PSMD1Q99460 953 aa8.91□□□□□ -0.98
RFC1-215ENST00000512881 SLC30A3Q99726 388 aa8.91□□□□□ -0.98
RFC1-215ENST00000512881 SUV39H2Q9H5I1 410 aa8.91□□□□□ -0.98
RFC1-215ENST00000512881 CHPF2Q9P2E5 772 aa8.91□□□□□ -0.98
RFC1-215ENST00000512881 PRR12Q9ULL5 1215 aa8.91□□□□□ -0.98
RFC1-215ENST00000512881 PCNTO95613 3336 aa8.91□□□□□ -0.98
RFC1-215ENST00000512881 ZNF541Q9H0D2 1346 aa8.9□□□□□ -0.98
RFC1-215ENST00000512881 SLX4Q8IY92 1834 aa8.9□□□□□ -0.98
RFC1-215ENST00000512881 IQCA1LA6NCM1 817 aa8.9□□□□□ -0.98
RFC1-215ENST00000512881 FZD9O00144 591 aa8.9□□□□□ -0.98
RFC1-215ENST00000512881 ZNF853P0CG23 659 aa8.9□□□□□ -0.98
RFC1-215ENST00000512881 HCLS1P14317 486 aaPredicted RBP8.9□□□□□ -0.98
RFC1-215ENST00000512881 SYT9Q86SS6 491 aa8.9□□□□□ -0.98
RFC1-215ENST00000512881 JDP2Q8WYK2 163 aa8.9□□□□□ -0.98
RFC1-215ENST00000512881 TAF1DQ9H5J8 278 aaPredicted RBP8.9□□□□□ -0.98
RFC1-215ENST00000512881 NEUROD4Q9HD90 331 aa8.9□□□□□ -0.98
RFC1-215ENST00000512881 BRD7Q9NPI1 651 aa8.9□□□□□ -0.98
RFC1-215ENST00000512881 DBF4Q9UBU7 674 aaPredicted RBP8.9□□□□□ -0.98
RFC1-215ENST00000512881 TRMT112Q9UI30 125 aaKnown RBP8.9□□□□□ -0.98
RFC1-215ENST00000512881 RIC1Q4ADV7 1423 aa8.89□□□□□ -0.99
RFC1-215ENST00000512881 BCORQ6W2J9 1755 aa8.89□□□□□ -0.99
RFC1-215ENST00000512881 KDM3BQ7LBC6 1761 aa8.89□□□□□ -0.99
RFC1-215ENST00000512881 DLEC1Q9Y238 1755 aa8.89□□□□□ -0.99
RFC1-215ENST00000512881 COL11A2P13942 1736 aaPredicted RBP8.89□□□□□ -0.99
RFC1-215ENST00000512881 RNF123Q5XPI4 1314 aa8.89□□□□□ -0.99
RFC1-215ENST00000512881 KRBA1A5PL33 1030 aa8.89□□□□□ -0.99
RFC1-215ENST00000512881 GNB5O14775 395 aa8.89□□□□□ -0.99
RFC1-215ENST00000512881 LGR5O75473 907 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms