RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 BRMS1Q9HCU9 246 aa8.74□□□□□ -1.01
CHD1-209ENST00000512844 KLHL3Q9UH77 587 aa8.74□□□□□ -1.01
CHD1-209ENST00000512844 TPX2Q9ULW0 747 aaKnown RBP8.74□□□□□ -1.01
CHD1-209ENST00000512844 CORINQ9Y5Q5 1042 aa8.74□□□□□ -1.01
CHD1-209ENST00000512844 COBLO75128 1261 aa8.73□□□□□ -1.01
CHD1-209ENST00000512844 HTR3BO95264 441 aa8.73□□□□□ -1.01
CHD1-209ENST00000512844 TGFB1P01137 390 aa8.73□□□□□ -1.01
CHD1-209ENST00000512844 CAP2P40123 477 aa8.73□□□□□ -1.01
CHD1-209ENST00000512844 UBE3DQ7Z6J8 389 aa8.73□□□□□ -1.01
CHD1-209ENST00000512844 MRPL41Q8IXM3 137 aaKnown RBP8.73□□□□□ -1.01
CHD1-209ENST00000512844 XAGE3Q8WTP9 111 aa8.73□□□□□ -1.01
CHD1-209ENST00000512844 DUSP23Q9BVJ7 150 aa8.73□□□□□ -1.01
CHD1-209ENST00000512844 REV1Q9UBZ9 1251 aa8.73□□□□□ -1.01
CHD1-209ENST00000512844 PCDHB14Q9Y5E9 798 aa8.73□□□□□ -1.01
CHD1-209ENST00000512844 CST3P01034 146 aaPredicted RBP8.72□□□□□ -1.01
CHD1-209ENST00000512844 RACK1P63244 317 aaKnown RBP8.72□□□□□ -1.01
CHD1-209ENST00000512844 GNL2Q13823 731 aaKnown RBP8.72□□□□□ -1.01
CHD1-209ENST00000512844 SLBPQ14493 270 aaKnown RBP eCLIP8.72□□□□□ -1.01
CHD1-209ENST00000512844 NKG7Q16617 165 aa8.72□□□□□ -1.01
CHD1-209ENST00000512844 GK5Q6ZS86 529 aa8.72□□□□□ -1.01
CHD1-209ENST00000512844 MCATQ8IVS2 390 aaKnown RBP8.72□□□□□ -1.01
CHD1-209ENST00000512844 GATA6Q92908 595 aa8.72□□□□□ -1.01
CHD1-209ENST00000512844 TJP2Q9UDY2 1190 aa8.72□□□□□ -1.01
CHD1-209ENST00000512844 INPP5FQ9Y2H2 1132 aa8.72□□□□□ -1.01
CHD1-209ENST00000512844 CYP7A1P22680 504 aa8.71□□□□□ -1.02
CHD1-209ENST00000512844 CRKP46108 304 aa8.71□□□□□ -1.02
CHD1-209ENST00000512844 TNNI2P48788 182 aa8.71□□□□□ -1.02
CHD1-209ENST00000512844 PAK2Q13177 524 aa8.71□□□□□ -1.02
CHD1-209ENST00000512844 PHACTR4Q8IZ21 702 aa8.71□□□□□ -1.02
CHD1-209ENST00000512844 REXO1Q8N1G1 1221 aaKnown RBP8.71□□□□□ -1.02
CHD1-209ENST00000512844 GPRASP2Q96D09 838 aa8.71□□□□□ -1.02
CHD1-209ENST00000512844 EAF1Q96JC9 268 aaPredicted RBP8.71□□□□□ -1.02
CHD1-209ENST00000512844 FERD3LQ96RJ6 166 aa8.71□□□□□ -1.02
CHD1-209ENST00000512844 DPH2Q9BQC3 489 aaPredicted RBP8.71□□□□□ -1.02
CHD1-209ENST00000512844 PRDM5Q9NQX1 630 aaPredicted RBP8.71□□□□□ -1.02
CHD1-209ENST00000512844 POLR3KQ9Y2Y1 108 aaPredicted RBP8.71□□□□□ -1.02
CHD1-209ENST00000512844 GNAT3A8MTJ3 354 aa8.7□□□□□ -1.02
CHD1-209ENST00000512844 LEFTY1O75610 366 aa8.7□□□□□ -1.02
CHD1-209ENST00000512844 FOSL1P15407 271 aa8.7□□□□□ -1.02
CHD1-209ENST00000512844 LRRFIP1Q32MZ4 808 aaKnown RBP8.7□□□□□ -1.02
CHD1-209ENST00000512844 TMEM201Q5SNT2 666 aa8.7□□□□□ -1.02
CHD1-209ENST00000512844 FBXW10Q5XX13 1052 aa8.7□□□□□ -1.02
CHD1-209ENST00000512844 LETMD1Q6P1Q0 360 aa8.7□□□□□ -1.02
CHD1-209ENST00000512844 SLITRK4Q8IW52 837 aa8.7□□□□□ -1.02
CHD1-209ENST00000512844 ACSF2Q96CM8 615 aaPredicted RBP8.7□□□□□ -1.02
CHD1-209ENST00000512844 PRR36Q9H6K5 1346 aa8.7□□□□□ -1.02
CHD1-209ENST00000512844 IMPDH2P12268 514 aa8.69□□□□□ -1.02
CHD1-209ENST00000512844 ITGB7P26010 798 aa8.69□□□□□ -1.02
CHD1-209ENST00000512844 SSTR4P31391 388 aa8.69□□□□□ -1.02
CHD1-209ENST00000512844 ETV3P41162 512 aa8.69□□□□□ -1.02
CHD1-209ENST00000512844 COL9A2Q14055 689 aaPredicted RBP8.69□□□□□ -1.02
CHD1-209ENST00000512844 VPS37DQ86XT2 251 aa8.69□□□□□ -1.02
CHD1-209ENST00000512844 PSMG3-AS1Q96PY0 264 aa8.69□□□□□ -1.02
CHD1-209ENST00000512844 PCMTD2Q9NV79 361 aa8.69□□□□□ -1.02
CHD1-209ENST00000512844 PRR19A6NJB7 356 aa8.68□□□□□ -1.02
CHD1-209ENST00000512844 RAG1P15918 1043 aa8.68□□□□□ -1.02
CHD1-209ENST00000512844 SHISA5Q8N114 240 aa8.68□□□□□ -1.02
CHD1-209ENST00000512844 CAPN10Q9HC96 672 aa8.68□□□□□ -1.02
CHD1-209ENST00000512844 ATE1O95260 518 aa8.67□□□□□ -1.02
CHD1-209ENST00000512844 CYB5D2Q8WUJ1 264 aa8.67□□□□□ -1.02
CHD1-209ENST00000512844 COX4I2Q96KJ9 171 aa8.67□□□□□ -1.02
CHD1-209ENST00000512844 CRBNQ96SW2 442 aa8.67□□□□□ -1.02
CHD1-209ENST00000512844 ACBD3Q9H3P7 528 aa8.67□□□□□ -1.02
CHD1-209ENST00000512844 EHMT1Q9H9B1 1298 aa8.67□□□□□ -1.02
CHD1-209ENST00000512844 GMIPQ9P107 970 aa8.67□□□□□ -1.02
CHD1-209ENST00000512844 MAPK8IP1Q9UQF2 711 aa8.67□□□□□ -1.02
CHD1-209ENST00000512844 SLITRK5O94991 958 aa8.66□□□□□ -1.02
CHD1-209ENST00000512844 GBP1P32455 592 aa8.66□□□□□ -1.02
CHD1-209ENST00000512844 CLCQ05315 142 aa8.66□□□□□ -1.02
CHD1-209ENST00000512844 LRP8Q14114 963 aa8.66□□□□□ -1.02
CHD1-209ENST00000512844 SFRP5Q5T4F7 317 aa8.66□□□□□ -1.02
CHD1-209ENST00000512844 SLFN12Q8IYM2 578 aa8.66□□□□□ -1.02
CHD1-209ENST00000512844 CPLX3Q8WVH0 158 aa8.66□□□□□ -1.02
CHD1-209ENST00000512844 CCDC74BQ96LY2 380 aa8.66□□□□□ -1.02
CHD1-209ENST00000512844 ANGEL1Q9UNK9 670 aaKnown RBP8.66□□□□□ -1.02
CHD1-209ENST00000512844 UPK3BL1B0FP48 263 aa8.65□□□□□ -1.02
CHD1-209ENST00000512844 FAM155AB1AL88 458 aaPredicted RBP8.65□□□□□ -1.02
CHD1-209ENST00000512844 UPK3BL2E5RIL1 263 aa8.65□□□□□ -1.02
CHD1-209ENST00000512844 ITIH2P19823 946 aa8.65□□□□□ -1.02
CHD1-209ENST00000512844 CDH24Q86UP0 819 aa8.65□□□□□ -1.02
CHD1-209ENST00000512844 FAM181AQ8N9Y4 354 aa8.65□□□□□ -1.02
CHD1-209ENST00000512844 MKNK2Q9HBH9 465 aa8.65□□□□□ -1.02
CHD1-209ENST00000512844 EFR3BQ9Y2G0 817 aa8.65□□□□□ -1.02
CHD1-209ENST00000512844 CHURC1-FNTBB4DL54 471 aa8.64□□□□□ -1.03
CHD1-209ENST00000512844 IGF2BP3O00425 579 aaKnown RBP eCLIP8.64□□□□□ -1.03
CHD1-209ENST00000512844 RAD51AP2Q09MP3 1159 aa8.64□□□□□ -1.03
CHD1-209ENST00000512844 ARSHQ5FYA8 562 aa8.64□□□□□ -1.03
CHD1-209ENST00000512844 XP32Q5T750 250 aa8.64□□□□□ -1.03
CHD1-209ENST00000512844 NETO1Q8TDF5 533 aa8.64□□□□□ -1.03
CHD1-209ENST00000512844 BSDC1Q9NW68 430 aaPredicted RBP8.64□□□□□ -1.03
CHD1-209ENST00000512844 SLC22A31A6NKX4 558 aa8.63□□□□□ -1.03
CHD1-209ENST00000512844 EOMESO95936 686 aa8.63□□□□□ -1.03
CHD1-209ENST00000512844 CEACAM5P06731 702 aa8.63□□□□□ -1.03
CHD1-209ENST00000512844 HOXA10P31260 410 aaPredicted RBP8.63□□□□□ -1.03
CHD1-209ENST00000512844 GJA8P48165 433 aa8.63□□□□□ -1.03
CHD1-209ENST00000512844 IFI16Q16666 785 aaKnown RBP8.63□□□□□ -1.03
CHD1-209ENST00000512844 OVOS1Q6IE37 1185 aa8.63□□□□□ -1.03
CHD1-209ENST00000512844 RASGRP4Q8TDF6 673 aa8.63□□□□□ -1.03
CHD1-209ENST00000512844 TMEM40Q8WWA1 233 aa8.63□□□□□ -1.03
CHD1-209ENST00000512844 GINM1Q9NU53 330 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms