RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 JAG2Q9Y219 1238 aa13.9□□□□□ -0.18
COL11A1-210ENST00000512756 IGSF3O75054 1194 aa13.89□□□□□ -0.19
COL11A1-210ENST00000512756 FLOT1O75955 427 aa13.89□□□□□ -0.19
COL11A1-210ENST00000512756 KRT5P13647 590 aa13.89□□□□□ -0.19
COL11A1-210ENST00000512756 MTX1Q13505 466 aa13.89□□□□□ -0.19
COL11A1-210ENST00000512756 POTEDQ86YR6 584 aa13.89□□□□□ -0.19
COL11A1-210ENST00000512756 PPFIBP2Q8ND30 876 aa13.89□□□□□ -0.19
COL11A1-210ENST00000512756 EIF4G3O43432 1585 aaKnown RBP13.89□□□□□ -0.19
COL11A1-210ENST00000512756 VIMP08670 466 aaKnown RBP13.89□□□□□ -0.19
COL11A1-210ENST00000512756 MAP7D1Q3KQU3 841 aa13.89□□□□□ -0.19
COL11A1-210ENST00000512756 CFAP221Q4G0U5 840 aa13.89□□□□□ -0.19
COL11A1-210ENST00000512756 HERC4Q5GLZ8 1057 aaPredicted RBP13.89□□□□□ -0.19
COL11A1-210ENST00000512756 ZNF365Q70YC5 407 aa13.89□□□□□ -0.19
COL11A1-210ENST00000512756 NDC80O14777 642 aa13.89□□□□□ -0.19
COL11A1-210ENST00000512756 GNPATO15228 680 aa13.89□□□□□ -0.19
COL11A1-210ENST00000512756 CTDSPL2Q05D32 466 aa13.89□□□□□ -0.19
COL11A1-210ENST00000512756 PPFIA1Q13136 1202 aa13.89□□□□□ -0.19
COL11A1-210ENST00000512756 DPH6Q7L8W6 267 aa13.89□□□□□ -0.19
COL11A1-210ENST00000512756 USP44Q9H0E7 712 aa13.89□□□□□ -0.19
COL11A1-210ENST00000512756 ZSWIM6Q9HCJ5 1215 aa13.89□□□□□ -0.19
COL11A1-210ENST00000512756 ANAPC4Q9UJX5 808 aa13.89□□□□□ -0.19
COL11A1-210ENST00000512756 ARHGEF35A5YM69 484 aa13.89□□□□□ -0.19
COL11A1-210ENST00000512756 GOLGA6BA6NDN3 693 aa13.89□□□□□ -0.19
COL11A1-210ENST00000512756 NEURL1BA8MQ27 555 aa13.89□□□□□ -0.19
COL11A1-210ENST00000512756 A1BGP04217 495 aa13.89□□□□□ -0.19
COL11A1-210ENST00000512756 PSMD1Q99460 953 aa13.89□□□□□ -0.19
COL11A1-210ENST00000512756 XPO4Q9C0E2 1151 aaKnown RBP13.89□□□□□ -0.19
COL11A1-210ENST00000512756 DNM3Q9UQ16 869 aa13.89□□□□□ -0.19
COL11A1-210ENST00000512756 RSRC1Q96IZ7 334 aaKnown RBP13.89□□□□□ -0.19
COL11A1-210ENST00000512756 GGA1Q9UJY5 639 aa13.89□□□□□ -0.19
COL11A1-210ENST00000512756 ZNF500O60304 480 aaPredicted RBP13.88□□□□□ -0.19
COL11A1-210ENST00000512756 HPDP32754 393 aaPredicted RBP13.88□□□□□ -0.19
COL11A1-210ENST00000512756 CABP7Q86V35 215 aa13.88□□□□□ -0.19
COL11A1-210ENST00000512756 C17orf53Q8N3J3 647 aaPredicted RBP13.88□□□□□ -0.19
COL11A1-210ENST00000512756 MYL10Q9BUA6 226 aa13.88□□□□□ -0.19
COL11A1-210ENST00000512756 TFCP2L1Q9NZI6 479 aa13.88□□□□□ -0.19
COL11A1-210ENST00000512756 PFKFB2O60825 505 aa13.88□□□□□ -0.19
COL11A1-210ENST00000512756 ARID4AP29374 1257 aaPredicted RBP13.88□□□□□ -0.19
COL11A1-210ENST00000512756 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.88□□□□□ -0.19
COL11A1-210ENST00000512756 ARL1P40616 181 aaPredicted RBP13.88□□□□□ -0.19
COL11A1-210ENST00000512756 MTMR3Q13615 1198 aa13.88□□□□□ -0.19
COL11A1-210ENST00000512756 C8orf37Q96NL8 207 aa13.88□□□□□ -0.19
COL11A1-210ENST00000512756 KLHL30Q0D2K2 578 aa13.88□□□□□ -0.19
COL11A1-210ENST00000512756 CALCRLQ16602 461 aa13.88□□□□□ -0.19
COL11A1-210ENST00000512756 TRIML1Q8N9V2 468 aa13.88□□□□□ -0.19
COL11A1-210ENST00000512756 KCNJ14Q9UNX9 436 aa13.88□□□□□ -0.19
COL11A1-210ENST00000512756 ATP7AQ04656 1500 aa13.87□□□□□ -0.19
COL11A1-210ENST00000512756 KDRP35968 1356 aa13.87□□□□□ -0.19
COL11A1-210ENST00000512756 GNA14O95837 355 aa13.87□□□□□ -0.19
COL11A1-210ENST00000512756 CFAP157Q5JU67 520 aa13.87□□□□□ -0.19
COL11A1-210ENST00000512756 ZNF496Q96IT1 587 aaPredicted RBP13.87□□□□□ -0.19
COL11A1-210ENST00000512756 BTG4Q9NY30 223 aa13.87□□□□□ -0.19
COL11A1-210ENST00000512756 ABCC2Q92887 1545 aa13.87□□□□□ -0.19
COL11A1-210ENST00000512756 BRD3Q15059 726 aa13.87□□□□□ -0.19
COL11A1-210ENST00000512756 SFMBT2Q5VUG0 894 aa13.87□□□□□ -0.19
COL11A1-210ENST00000512756 SLF1Q9BQI6 1058 aa13.87□□□□□ -0.19
COL11A1-210ENST00000512756 NT5C3AQ9H0P0 336 aa13.87□□□□□ -0.19
COL11A1-210ENST00000512756 AATFQ9NY61 560 aaKnown RBP eCLIP13.87□□□□□ -0.19
COL11A1-210ENST00000512756 AGTPBP1Q9UPW5 1226 aa13.87□□□□□ -0.19
COL11A1-210ENST00000512756 MTMR6Q9Y217 621 aa13.87□□□□□ -0.19
COL11A1-210ENST00000512756 KIF21AQ7Z4S6 1674 aa13.87□□□□□ -0.19
COL11A1-210ENST00000512756 PFKFB1P16118 471 aa13.87□□□□□ -0.19
COL11A1-210ENST00000512756 RPS6KA1Q15418 735 aa13.87□□□□□ -0.19
COL11A1-210ENST00000512756 FYB2Q5VWT5 728 aa13.87□□□□□ -0.19
COL11A1-210ENST00000512756 GBP6Q6ZN66 633 aa13.87□□□□□ -0.19
COL11A1-210ENST00000512756 TAOK1Q7L7X3 1001 aa13.87□□□□□ -0.19
COL11A1-210ENST00000512756 DAAM2Q86T65 1068 aa13.87□□□□□ -0.19
COL11A1-210ENST00000512756 CCDC87Q9NVE4 849 aa13.87□□□□□ -0.19
COL11A1-210ENST00000512756 SERTAD1Q9UHV2 236 aa13.87□□□□□ -0.19
COL11A1-210ENST00000512756 FAM135BQ49AJ0 1406 aa13.87□□□□□ -0.19
COL11A1-210ENST00000512756 CCDC169A6NNP5 214 aa13.87□□□□□ -0.19
COL11A1-210ENST00000512756 CEP104O60308 925 aa13.87□□□□□ -0.19
COL11A1-210ENST00000512756 PAXIP1Q6ZW49 1069 aaPredicted RBP13.87□□□□□ -0.19
COL11A1-210ENST00000512756 MRFAP1L1Q96HT8 127 aa13.87□□□□□ -0.19
COL11A1-210ENST00000512756 RGS12O14924 1447 aa13.86□□□□□ -0.19
COL11A1-210ENST00000512756 CMA1P23946 247 aa13.86□□□□□ -0.19
COL11A1-210ENST00000512756 WHAMMP3Q1A5X7 153 aa13.86□□□□□ -0.19
COL11A1-210ENST00000512756 BCRP11274 1271 aa13.86□□□□□ -0.19
COL11A1-210ENST00000512756 INPP5BP32019 993 aa13.86□□□□□ -0.19
COL11A1-210ENST00000512756 ARHGAP25P42331 645 aa13.86□□□□□ -0.19
COL11A1-210ENST00000512756 NBPF14Q5TI25 921 aa13.86□□□□□ -0.19
COL11A1-210ENST00000512756 NCAPH2Q6IBW4 605 aa13.86□□□□□ -0.19
COL11A1-210ENST00000512756 NOSTRINQ8IVI9 506 aa13.86□□□□□ -0.19
COL11A1-210ENST00000512756 FAM204AQ9H8W3 233 aa13.86□□□□□ -0.19
COL11A1-210ENST00000512756 CTTNBP2NLQ9P2B4 639 aa13.86□□□□□ -0.19
COL11A1-210ENST00000512756 ARPP21Q9UBL0 812 aaPredicted RBP13.86□□□□□ -0.19
COL11A1-210ENST00000512756 SLC1A4P43007 532 aa13.86□□□□□ -0.19
COL11A1-210ENST00000512756 SNX16P57768 344 aa13.86□□□□□ -0.19
COL11A1-210ENST00000512756 TCIRG1Q13488 830 aa13.86□□□□□ -0.19
COL11A1-210ENST00000512756 ZNF654Q8IZM8 581 aa13.86□□□□□ -0.19
COL11A1-210ENST00000512756 OR8K1Q8NGG5 319 aa13.86□□□□□ -0.19
COL11A1-210ENST00000512756 CHMP2AO43633 222 aa13.86□□□□□ -0.19
COL11A1-210ENST00000512756 TAF5LO75529 589 aa13.86□□□□□ -0.19
COL11A1-210ENST00000512756 RBM6P78332 1123 aaKnown RBP13.86□□□□□ -0.19
COL11A1-210ENST00000512756 BEND3Q5T5X7 828 aa13.86□□□□□ -0.19
COL11A1-210ENST00000512756 REXO1Q8N1G1 1221 aaKnown RBP13.86□□□□□ -0.19
COL11A1-210ENST00000512756 STMN2Q93045 179 aa13.86□□□□□ -0.19
COL11A1-210ENST00000512756 STRN3Q13033 797 aa13.85□□□□□ -0.19
COL11A1-210ENST00000512756 MKRN1Q9UHC7 482 aaKnown RBP13.85□□□□□ -0.19
COL11A1-210ENST00000512756 ERVV-2B6SEH9 535 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms