RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 PRAMEF13Q5VWM6 474 aa4.33□□□□□ -1.72
PDGFC-208ENST00000512711 FBXO33Q7Z6M2 555 aa4.33□□□□□ -1.72
PDGFC-208ENST00000512711 HID1Q8IV36 788 aa4.33□□□□□ -1.72
PDGFC-208ENST00000512711 KCT2Q8NC54 265 aa4.33□□□□□ -1.72
PDGFC-208ENST00000512711 HSPA12BQ96MM6 686 aa4.33□□□□□ -1.72
PDGFC-208ENST00000512711 MIPEPQ99797 713 aa4.33□□□□□ -1.72
PDGFC-208ENST00000512711 ATP13A1Q9HD20 1204 aa4.33□□□□□ -1.72
PDGFC-208ENST00000512711 PRDM5Q9NQX1 630 aaPredicted RBP4.33□□□□□ -1.72
PDGFC-208ENST00000512711 SEMA3GQ9NS98 782 aa4.33□□□□□ -1.72
PDGFC-208ENST00000512711 TJP2Q9UDY2 1190 aa4.33□□□□□ -1.72
PDGFC-208ENST00000512711 CORINQ9Y5Q5 1042 aa4.33□□□□□ -1.72
PDGFC-208ENST00000512711 USP31Q70CQ4 1352 aa4.32□□□□□ -1.72
PDGFC-208ENST00000512711 PITPNM2Q9BZ72 1349 aa4.32□□□□□ -1.72
PDGFC-208ENST00000512711 UPK3BL1B0FP48 263 aa4.32□□□□□ -1.72
PDGFC-208ENST00000512711 UPK3BL2E5RIL1 263 aa4.32□□□□□ -1.72
PDGFC-208ENST00000512711 CBX7O95931 251 aa4.32□□□□□ -1.72
PDGFC-208ENST00000512711 CST3P01034 146 aaPredicted RBP4.32□□□□□ -1.72
PDGFC-208ENST00000512711 CAP2P40123 477 aa4.32□□□□□ -1.72
PDGFC-208ENST00000512711 RPS26P62854 115 aaKnown RBP4.32□□□□□ -1.72
PDGFC-208ENST00000512711 FGD1P98174 961 aa4.32□□□□□ -1.72
PDGFC-208ENST00000512711 ZP2Q05996 745 aa4.32□□□□□ -1.72
PDGFC-208ENST00000512711 IKZF1Q13422 519 aa4.32□□□□□ -1.72
PDGFC-208ENST00000512711 TAF1CQ15572 869 aaPredicted RBP4.32□□□□□ -1.72
PDGFC-208ENST00000512711 FYB2Q5VWT5 728 aa4.32□□□□□ -1.72
PDGFC-208ENST00000512711 LETMD1Q6P1Q0 360 aa4.32□□□□□ -1.72
PDGFC-208ENST00000512711 SLC23A3Q6PIS1 610 aa4.32□□□□□ -1.72
PDGFC-208ENST00000512711 ATG4DQ86TL0 474 aaPredicted RBP4.32□□□□□ -1.72
PDGFC-208ENST00000512711 TPX2Q9ULW0 747 aaKnown RBP4.32□□□□□ -1.72
PDGFC-208ENST00000512711 GNAT3A8MTJ3 354 aa4.31□□□□□ -1.72
PDGFC-208ENST00000512711 PSMD2Q13200 908 aa4.31□□□□□ -1.72
PDGFC-208ENST00000512711 SFRP5Q5T4F7 317 aa4.31□□□□□ -1.72
PDGFC-208ENST00000512711 ZNF648Q5T619 568 aaPredicted RBP4.31□□□□□ -1.72
PDGFC-208ENST00000512711 ANGEL2Q5VTE6 544 aaKnown RBP4.31□□□□□ -1.72
PDGFC-208ENST00000512711 BNC2Q6ZN30 1099 aaPredicted RBP4.31□□□□□ -1.72
PDGFC-208ENST00000512711 MFSD2AQ8NA29 543 aa4.31□□□□□ -1.72
PDGFC-208ENST00000512711 PHC3Q8NDX5 983 aa4.31□□□□□ -1.72
PDGFC-208ENST00000512711 ASB11Q8WXH4 323 aa4.31□□□□□ -1.72
PDGFC-208ENST00000512711 MIR1-1HGQ9H1L0 117 aa4.31□□□□□ -1.72
PDGFC-208ENST00000512711 ST14Q9Y5Y6 855 aa4.31□□□□□ -1.72
PDGFC-208ENST00000512711 CAPN6Q9Y6Q1 641 aa4.31□□□□□ -1.72
PDGFC-208ENST00000512711 FAM221AA4D161 298 aa4.3□□□□□ -1.72
PDGFC-208ENST00000512711 FAM155AB1AL88 458 aaPredicted RBP4.3□□□□□ -1.72
PDGFC-208ENST00000512711 PATL2C9JE40 543 aaKnown RBP4.3□□□□□ -1.72
PDGFC-208ENST00000512711 H3BS24 57 aa4.3□□□□□ -1.72
PDGFC-208ENST00000512711 PF4P02776 101 aa4.3□□□□□ -1.72
PDGFC-208ENST00000512711 PGRP06401 933 aa4.3□□□□□ -1.72
PDGFC-208ENST00000512711 ZNF865P0CJ78 1059 aaPredicted RBP4.3□□□□□ -1.72
PDGFC-208ENST00000512711 TNK2Q07912 1038 aa4.3□□□□□ -1.72
PDGFC-208ENST00000512711 ZNF124Q15973 351 aa4.3□□□□□ -1.72
PDGFC-208ENST00000512711 TSNAXIP1Q2TAA8 658 aa4.3□□□□□ -1.72
PDGFC-208ENST00000512711 TMC4Q7Z404 712 aa4.3□□□□□ -1.72
PDGFC-208ENST00000512711 FAM168AQ92567 244 aa4.3□□□□□ -1.72
PDGFC-208ENST00000512711 UBE2FQ969M7 185 aa4.3□□□□□ -1.72
PDGFC-208ENST00000512711 ACSF2Q96CM8 615 aaPredicted RBP4.3□□□□□ -1.72
PDGFC-208ENST00000512711 GZF1Q9H116 711 aaPredicted RBP4.3□□□□□ -1.72
PDGFC-208ENST00000512711 CARS2Q9HA77 564 aaKnown RBP4.3□□□□□ -1.72
PDGFC-208ENST00000512711 C19orf73Q9NVV2 129 aa4.3□□□□□ -1.72
PDGFC-208ENST00000512711 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.3□□□□□ -1.72
PDGFC-208ENST00000512711 MAPK8IP1Q9UQF2 711 aa4.3□□□□□ -1.72
PDGFC-208ENST00000512711 ZNF503-AS2A6NEH8 195 aa4.29□□□□□ -1.72
PDGFC-208ENST00000512711 BIN1O00499 593 aa4.29□□□□□ -1.72
PDGFC-208ENST00000512711 F13A1P00488 732 aa4.29□□□□□ -1.72
PDGFC-208ENST00000512711 LMNB1P20700 586 aa4.29□□□□□ -1.72
PDGFC-208ENST00000512711 XPCQ01831 940 aaPredicted RBP4.29□□□□□ -1.72
PDGFC-208ENST00000512711 RPL6Q02878 288 aaKnown RBP4.29□□□□□ -1.72
PDGFC-208ENST00000512711 CAMK2GQ13555 558 aaPredicted RBP4.29□□□□□ -1.72
PDGFC-208ENST00000512711 FBLN7Q53RD9 439 aa4.29□□□□□ -1.72
PDGFC-208ENST00000512711 MCATQ8IVS2 390 aaKnown RBP4.29□□□□□ -1.72
PDGFC-208ENST00000512711 MRPL41Q8IXM3 137 aaKnown RBP4.29□□□□□ -1.72
PDGFC-208ENST00000512711 PPP1R13LQ8WUF5 828 aa4.29□□□□□ -1.72
PDGFC-208ENST00000512711 TMEM87BQ96K49 555 aa4.29□□□□□ -1.72
PDGFC-208ENST00000512711 NOC4LQ9BVI4 516 aaKnown RBP4.29□□□□□ -1.72
PDGFC-208ENST00000512711 ZSWIM5Q9P217 1185 aa4.29□□□□□ -1.72
PDGFC-208ENST00000512711 CTNND2Q9UQB3 1225 aa4.29□□□□□ -1.72
PDGFC-208ENST00000512711 MINDY4BA8MYZ0 360 aa4.28□□□□□ -1.72
PDGFC-208ENST00000512711 LRRN2O75325 713 aa4.28□□□□□ -1.72
PDGFC-208ENST00000512711 CILPO75339 1184 aa4.28□□□□□ -1.72
PDGFC-208ENST00000512711 CLCN7P51798 805 aa4.28□□□□□ -1.72
PDGFC-208ENST00000512711 SLC6A19Q695T7 634 aa4.28□□□□□ -1.72
PDGFC-208ENST00000512711 MFSD4AQ8N468 514 aa4.28□□□□□ -1.72
PDGFC-208ENST00000512711 DNAJB8Q8NHS0 232 aa4.28□□□□□ -1.72
PDGFC-208ENST00000512711 FBXO27Q8NI29 283 aa4.28□□□□□ -1.72
PDGFC-208ENST00000512711 LIN37Q96GY3 246 aaPredicted RBP4.28□□□□□ -1.72
PDGFC-208ENST00000512711 Q96M66 194 aa4.28□□□□□ -1.72
PDGFC-208ENST00000512711 KRTAP4-11Q9BYQ6 195 aa4.28□□□□□ -1.72
PDGFC-208ENST00000512711 DUSP15Q9H1R2 295 aaPredicted RBP4.28□□□□□ -1.72
PDGFC-208ENST00000512711 COPRSQ9NQ92 184 aa4.28□□□□□ -1.72
PDGFC-208ENST00000512711 LMCD1Q9NZU5 365 aa4.28□□□□□ -1.72
PDGFC-208ENST00000512711 TACC3Q9Y6A5 838 aa4.28□□□□□ -1.72
PDGFC-208ENST00000512711 DBX1A6NMT0 343 aa4.27□□□□□ -1.73
PDGFC-208ENST00000512711 CHURC1-FNTBB4DL54 471 aa4.27□□□□□ -1.73
PDGFC-208ENST00000512711 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.27□□□□□ -1.73
PDGFC-208ENST00000512711 GRIN3BO60391 1043 aa4.27□□□□□ -1.73
PDGFC-208ENST00000512711 DNAJA2O60884 412 aa4.27□□□□□ -1.73
PDGFC-208ENST00000512711 ESR1P03372 595 aa4.27□□□□□ -1.73
PDGFC-208ENST00000512711 ST13P50502 369 aaKnown RBP4.27□□□□□ -1.73
PDGFC-208ENST00000512711 FAM160A1Q05DH4 1040 aa4.27□□□□□ -1.73
PDGFC-208ENST00000512711 C22orf34Q6ZV56 151 aa4.27□□□□□ -1.73
PDGFC-208ENST00000512711 FLAD1Q8NFF5 587 aa4.27□□□□□ -1.73
PDGFC-208ENST00000512711 KCNK12Q9HB15 430 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms