RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 DOCK1Q14185 1865 aa12.72□□□□□ -0.37
PDLIM5-217ENST00000512274 MAST3O60307 1309 aa12.71□□□□□ -0.37
PDLIM5-217ENST00000512274 TTC41PQ6P2S7 1318 aa12.71□□□□□ -0.37
PDLIM5-217ENST00000512274 CIAO1O76071 339 aa12.71□□□□□ -0.37
PDLIM5-217ENST00000512274 PDE1AP54750 535 aa12.71□□□□□ -0.37
PDLIM5-217ENST00000512274 CACNB2Q08289 660 aaPredicted RBP12.71□□□□□ -0.37
PDLIM5-217ENST00000512274 MRIQ9BWK5 157 aa12.71□□□□□ -0.37
PDLIM5-217ENST00000512274 GPR108Q9NPR9 543 aa12.71□□□□□ -0.37
PDLIM5-217ENST00000512274 FAM198AQ9UFP1 575 aa12.71□□□□□ -0.37
PDLIM5-217ENST00000512274 PEX10O60683 326 aa12.7□□□□□ -0.38
PDLIM5-217ENST00000512274 CAVIN4Q5BKX8 364 aa12.7□□□□□ -0.38
PDLIM5-217ENST00000512274 MAP3K21Q5TCX8 1036 aa12.7□□□□□ -0.38
PDLIM5-217ENST00000512274 LHX8Q68G74 356 aa12.7□□□□□ -0.38
PDLIM5-217ENST00000512274 TICAM2Q86XR7 235 aa12.7□□□□□ -0.38
PDLIM5-217ENST00000512274 KLHDC4Q8TBB5 520 aa12.7□□□□□ -0.38
PDLIM5-217ENST00000512274 PNMA3Q9UL41 463 aa12.7□□□□□ -0.38
PDLIM5-217ENST00000512274 MYH13Q9UKX3 1938 aa12.7□□□□□ -0.38
PDLIM5-217ENST00000512274 PRUNE2Q8WUY3 3088 aa12.69□□□□□ -0.38
PDLIM5-217ENST00000512274 MX1P20591 662 aa12.69□□□□□ -0.38
PDLIM5-217ENST00000512274 SMAD3P84022 425 aaKnown RBP12.69□□□□□ -0.38
PDLIM5-217ENST00000512274 GRIN2CQ14957 1233 aa12.69□□□□□ -0.38
PDLIM5-217ENST00000512274 DIXDC1Q155Q3 683 aa12.69□□□□□ -0.38
PDLIM5-217ENST00000512274 ZSCAN29Q8IWY8 852 aaPredicted RBP12.69□□□□□ -0.38
PDLIM5-217ENST00000512274 USP40Q9NVE5 1235 aa12.69□□□□□ -0.38
PDLIM5-217ENST00000512274 ATP11BQ9Y2G3 1177 aa12.69□□□□□ -0.38
PDLIM5-217ENST00000512274 DAGLAQ9Y4D2 1042 aa12.69□□□□□ -0.38
PDLIM5-217ENST00000512274 SPTBN5Q9NRC6 3674 aaKnown RBP12.69□□□□□ -0.38
PDLIM5-217ENST00000512274 EPB41L2O43491 1005 aaKnown RBP12.68□□□□□ -0.38
PDLIM5-217ENST00000512274 GSPT1P15170 499 aaKnown RBP12.68□□□□□ -0.38
PDLIM5-217ENST00000512274 GCLCP48506 637 aaPredicted RBP12.68□□□□□ -0.38
PDLIM5-217ENST00000512274 RTP1P59025 263 aa12.68□□□□□ -0.38
PDLIM5-217ENST00000512274 G3BP1Q13283 466 aaKnown RBP eCLIP12.68□□□□□ -0.38
PDLIM5-217ENST00000512274 CCL14Q16627 93 aa12.68□□□□□ -0.38
PDLIM5-217ENST00000512274 CLASRPQ8N2M8 674 aaKnown RBP12.68□□□□□ -0.38
PDLIM5-217ENST00000512274 ADAMTS19Q8TE59 1207 aa12.68□□□□□ -0.38
PDLIM5-217ENST00000512274 BADQ92934 168 aa12.68□□□□□ -0.38
PDLIM5-217ENST00000512274 NUDT12Q9BQG2 462 aa12.68□□□□□ -0.38
PDLIM5-217ENST00000512274 PRDM5Q9NQX1 630 aaPredicted RBP12.68□□□□□ -0.38
PDLIM5-217ENST00000512274 ZKSCAN1P17029 563 aaPredicted RBP12.67□□□□□ -0.38
PDLIM5-217ENST00000512274 IL15P40933 162 aaPredicted RBP12.67□□□□□ -0.38
PDLIM5-217ENST00000512274 TCF20Q9UGU0 1960 aaKnown RBP12.67□□□□□ -0.38
PDLIM5-217ENST00000512274 CDC45O75419 566 aa12.66□□□□□ -0.38
PDLIM5-217ENST00000512274 SPP2Q13103 211 aa12.66□□□□□ -0.38
PDLIM5-217ENST00000512274 LRRC24Q50LG9 513 aa12.66□□□□□ -0.38
PDLIM5-217ENST00000512274 UHRF1Q96T88 793 aaPredicted RBP12.66□□□□□ -0.38
PDLIM5-217ENST00000512274 ASCC2Q9H1I8 757 aaPredicted RBP12.66□□□□□ -0.38
PDLIM5-217ENST00000512274 SUGT1Q9Y2Z0 365 aa12.66□□□□□ -0.38
PDLIM5-217ENST00000512274 ATRNL1Q5VV63 1379 aa12.66□□□□□ -0.38
PDLIM5-217ENST00000512274 LOC285556D6RIA3 1793 aa12.66□□□□□ -0.38
PDLIM5-217ENST00000512274 ATAD5Q96QE3 1844 aa12.65□□□□□ -0.38
PDLIM5-217ENST00000512274 DDTLA6NHG4 134 aaPredicted RBP12.65□□□□□ -0.38
PDLIM5-217ENST00000512274 EYA2O00167 538 aa12.65□□□□□ -0.38
PDLIM5-217ENST00000512274 ERC2O15083 957 aa12.65□□□□□ -0.38
PDLIM5-217ENST00000512274 SMARCA5O60264 1052 aaPredicted RBP12.65□□□□□ -0.38
PDLIM5-217ENST00000512274 CTNND1O60716 968 aaKnown RBP12.65□□□□□ -0.38
PDLIM5-217ENST00000512274 CNGA1P29973 690 aa12.65□□□□□ -0.38
PDLIM5-217ENST00000512274 HMGCS2P54868 508 aa12.65□□□□□ -0.38
PDLIM5-217ENST00000512274 METTL24Q5JXM2 366 aa12.65□□□□□ -0.38
PDLIM5-217ENST00000512274 SH3BP5LQ7L8J4 393 aa12.65□□□□□ -0.38
PDLIM5-217ENST00000512274 PROCA1Q8NCQ7 364 aaPredicted RBP12.65□□□□□ -0.38
PDLIM5-217ENST00000512274 PI4K2BQ8TCG2 481 aa12.65□□□□□ -0.38
PDLIM5-217ENST00000512274 OTUD7AQ8TE49 926 aaPredicted RBP12.65□□□□□ -0.38
PDLIM5-217ENST00000512274 GPATCH3Q96I76 525 aa12.65□□□□□ -0.38
PDLIM5-217ENST00000512274 ASB2Q96Q27 587 aa12.65□□□□□ -0.38
PDLIM5-217ENST00000512274 MROH5Q6ZUA9 1318 aa12.64□□□□□ -0.39
PDLIM5-217ENST00000512274 FAM196BA6NMK8 535 aa12.64□□□□□ -0.39
PDLIM5-217ENST00000512274 GLRX3O76003 335 aaKnown RBP12.64□□□□□ -0.39
PDLIM5-217ENST00000512274 XRCC5P13010 732 aaKnown RBP12.64□□□□□ -0.39
PDLIM5-217ENST00000512274 PRDX5P30044 214 aa12.64□□□□□ -0.39
PDLIM5-217ENST00000512274 CCDC85BQ15834 202 aaPredicted RBP12.64□□□□□ -0.39
PDLIM5-217ENST00000512274 ATG9AQ7Z3C6 839 aa12.64□□□□□ -0.39
PDLIM5-217ENST00000512274 ATXN2LQ8WWM7 1075 aaKnown RBP12.64□□□□□ -0.39
PDLIM5-217ENST00000512274 NECAB3Q96P71 396 aaPredicted RBP12.64□□□□□ -0.39
PDLIM5-217ENST00000512274 UPF2Q9HAU5 1272 aaKnown RBP12.64□□□□□ -0.39
PDLIM5-217ENST00000512274 PA2G4Q9UQ80 394 aaKnown RBP12.64□□□□□ -0.39
PDLIM5-217ENST00000512274 RFX7Q2KHR2 1363 aa12.64□□□□□ -0.39
PDLIM5-217ENST00000512274 RLFQ13129 1914 aa12.64□□□□□ -0.39
PDLIM5-217ENST00000512274 MYH2Q9UKX2 1941 aa12.64□□□□□ -0.39
PDLIM5-217ENST00000512274 SDSP20132 328 aa12.63□□□□□ -0.39
PDLIM5-217ENST00000512274 PABPC4Q13310 644 aaKnown RBP eCLIP12.63□□□□□ -0.39
PDLIM5-217ENST00000512274 OS9Q13438 667 aaPredicted RBP12.63□□□□□ -0.39
PDLIM5-217ENST00000512274 GJC2Q5T442 439 aaPredicted RBP12.63□□□□□ -0.39
PDLIM5-217ENST00000512274 SH3RF1Q7Z6J0 888 aa12.63□□□□□ -0.39
PDLIM5-217ENST00000512274 CCAR1Q8IX12 1150 aaKnown RBP12.63□□□□□ -0.39
PDLIM5-217ENST00000512274 TRMT44Q8IYL2 757 aaKnown RBP12.63□□□□□ -0.39
PDLIM5-217ENST00000512274 IL27Q8NEV9 243 aa12.63□□□□□ -0.39
PDLIM5-217ENST00000512274 SOCS4Q8WXH5 440 aa12.63□□□□□ -0.39
PDLIM5-217ENST00000512274 RNPC3Q96LT9 517 aaKnown RBP12.63□□□□□ -0.39
PDLIM5-217ENST00000512274 TBC1D32Q96NH3 1257 aa12.63□□□□□ -0.39
PDLIM5-217ENST00000512274 SIL1Q9H173 461 aa12.63□□□□□ -0.39
PDLIM5-217ENST00000512274 TXNRD2Q9NNW7 524 aa12.63□□□□□ -0.39
PDLIM5-217ENST00000512274 ECHDC1Q9NTX5 307 aa12.63□□□□□ -0.39
PDLIM5-217ENST00000512274 THEGQ9P2T0 379 aa12.63□□□□□ -0.39
PDLIM5-217ENST00000512274 MORF4L1Q9UBU8 362 aa12.63□□□□□ -0.39
PDLIM5-217ENST00000512274 ZBTB22O15209 634 aa12.62□□□□□ -0.39
PDLIM5-217ENST00000512274 ANP32AP39687 249 aaKnown RBP12.62□□□□□ -0.39
PDLIM5-217ENST00000512274 IRX3P78415 501 aaPredicted RBP12.62□□□□□ -0.39
PDLIM5-217ENST00000512274 MRPS5P82675 430 aaKnown RBP12.62□□□□□ -0.39
PDLIM5-217ENST00000512274 PICALMQ13492 652 aa12.62□□□□□ -0.39
PDLIM5-217ENST00000512274 Q3C1V9 767 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms