RNA–Protein interactions for RNA: ENST00000512040.1

MATR3-219, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-219ENST00000512040 NAT1P18440 290 aa5.29□□□□□ -1.56
MATR3-219ENST00000512040 CASP2P42575 452 aa5.29□□□□□ -1.56
MATR3-219ENST00000512040 TNNT2P45379 298 aaPredicted RBP5.29□□□□□ -1.56
MATR3-219ENST00000512040 TRPC1P48995 793 aa5.29□□□□□ -1.56
MATR3-219ENST00000512040 RAD51AP2Q09MP3 1159 aa5.29□□□□□ -1.56
MATR3-219ENST00000512040 IFT88Q13099 833 aa5.29□□□□□ -1.56
MATR3-219ENST00000512040 USP4Q13107 963 aa5.29□□□□□ -1.56
MATR3-219ENST00000512040 CBLBQ13191 982 aa5.29□□□□□ -1.56
MATR3-219ENST00000512040 RAPGEF1Q13905 1077 aa5.29□□□□□ -1.56
MATR3-219ENST00000512040 SOGA3Q5TF21 947 aa5.29□□□□□ -1.56
MATR3-219ENST00000512040 OTUD6AQ7L8S5 288 aa5.29□□□□□ -1.56
MATR3-219ENST00000512040 UBE2Q1Q7Z7E8 422 aa5.29□□□□□ -1.56
MATR3-219ENST00000512040 DHX38Q92620 1227 aaKnown RBP5.29□□□□□ -1.56
MATR3-219ENST00000512040 FRMD6Q96NE9 622 aa5.29□□□□□ -1.56
MATR3-219ENST00000512040 APBA2Q99767 749 aa5.29□□□□□ -1.56
MATR3-219ENST00000512040 CCDC94Q9BW85 323 aaPredicted RBP5.29□□□□□ -1.56
MATR3-219ENST00000512040 KRTAP4-7Q9BYR0 210 aa5.29□□□□□ -1.56
MATR3-219ENST00000512040 LRRC27Q9C0I9 530 aa5.29□□□□□ -1.56
MATR3-219ENST00000512040 SUN2Q9UH99 717 aa5.29□□□□□ -1.56
MATR3-219ENST00000512040 ASAP1Q9ULH1 1129 aa5.29□□□□□ -1.56
MATR3-219ENST00000512040 NOD1Q9Y239 953 aa5.29□□□□□ -1.56
MATR3-219ENST00000512040 NCAPD2Q15021 1401 aa5.29□□□□□ -1.56
MATR3-219ENST00000512040 MYH14Q7Z406 1995 aaKnown RBP5.29□□□□□ -1.56
MATR3-219ENST00000512040 TJP1Q07157 1748 aa5.28□□□□□ -1.56
MATR3-219ENST00000512040 MAP3K19Q56UN5 1328 aa5.28□□□□□ -1.56
MATR3-219ENST00000512040 GOLGA6L6A8MZA4 724 aa5.28□□□□□ -1.56
MATR3-219ENST00000512040 SCAMP3O14828 347 aaKnown RBP5.28□□□□□ -1.56
MATR3-219ENST00000512040 LZTS3O60299 673 aaPredicted RBP5.28□□□□□ -1.56
MATR3-219ENST00000512040 LILRA1O75019 489 aa5.28□□□□□ -1.56
MATR3-219ENST00000512040 DNAJC6O75061 913 aa5.28□□□□□ -1.56
MATR3-219ENST00000512040 FOSP01100 380 aaPredicted RBP5.28□□□□□ -1.56
MATR3-219ENST00000512040 PDGFRBP09619 1106 aa5.28□□□□□ -1.56
MATR3-219ENST00000512040 TIMP2P16035 220 aa5.28□□□□□ -1.56
MATR3-219ENST00000512040 RASA1P20936 1047 aa5.28□□□□□ -1.56
MATR3-219ENST00000512040 TERF1P54274 439 aa5.28□□□□□ -1.56
MATR3-219ENST00000512040 ERVK-9P63128 1117 aa5.28□□□□□ -1.56
MATR3-219ENST00000512040 GTF2IP78347 998 aa5.28□□□□□ -1.56
MATR3-219ENST00000512040 HMGN5P82970 282 aaKnown RBP5.28□□□□□ -1.56
MATR3-219ENST00000512040 TMEM95Q3KNT9 176 aa5.28□□□□□ -1.56
MATR3-219ENST00000512040 ALDH1L2Q3SY69 923 aa5.28□□□□□ -1.56
MATR3-219ENST00000512040 FBXO33Q7Z6M2 555 aa5.28□□□□□ -1.56
MATR3-219ENST00000512040 LCA5Q86VQ0 697 aa5.28□□□□□ -1.56
MATR3-219ENST00000512040 HSCBQ8IWL3 235 aa5.28□□□□□ -1.56
MATR3-219ENST00000512040 CHPFQ8IZ52 775 aa5.28□□□□□ -1.56
MATR3-219ENST00000512040 NGEFQ8N5V2 710 aa5.28□□□□□ -1.56
MATR3-219ENST00000512040 USHBP1Q8N6Y0 703 aa5.28□□□□□ -1.56
MATR3-219ENST00000512040 DDX54Q8TDD1 881 aaKnown RBP5.28□□□□□ -1.56
MATR3-219ENST00000512040 AGAP3Q96P47 875 aa5.28□□□□□ -1.56
MATR3-219ENST00000512040 MAP7D2Q96T17 732 aa5.28□□□□□ -1.56
MATR3-219ENST00000512040 GMLQ99445 158 aa5.28□□□□□ -1.56
MATR3-219ENST00000512040 ALDH8A1Q9H2A2 487 aaPredicted RBP5.28□□□□□ -1.56
MATR3-219ENST00000512040 ZSWIM4Q9H7M6 989 aa5.28□□□□□ -1.56
MATR3-219ENST00000512040 CEP83Q9Y592 693 aa5.28□□□□□ -1.56
MATR3-219ENST00000512040 TIAM2Q8IVF5 1701 aa5.28□□□□□ -1.56
MATR3-219ENST00000512040 SBF1O95248 1867 aa5.28□□□□□ -1.56
MATR3-219ENST00000512040 ZNF831Q5JPB2 1677 aa5.28□□□□□ -1.56
MATR3-219ENST00000512040 CGNL1Q0VF96 1302 aa5.27□□□□□ -1.57
MATR3-219ENST00000512040 DLEC1Q9Y238 1755 aa5.27□□□□□ -1.57
MATR3-219ENST00000512040 ANKRD33BA6NCL7 494 aa5.27□□□□□ -1.57
MATR3-219ENST00000512040 ATP5J2-PTCD1G3V325 749 aa5.27□□□□□ -1.57
MATR3-219ENST00000512040 CHL1O00533 1208 aa5.27□□□□□ -1.57
MATR3-219ENST00000512040 ENPP3O14638 875 aa5.27□□□□□ -1.57
MATR3-219ENST00000512040 HNRNPCP07910 306 aaKnown RBP eCLIP5.27□□□□□ -1.57
MATR3-219ENST00000512040 HSPA6P17066 643 aa5.27□□□□□ -1.57
MATR3-219ENST00000512040 RPL17P18621 184 aaKnown RBP5.27□□□□□ -1.57
MATR3-219ENST00000512040 HMGB2P26583 209 aaKnown RBP5.27□□□□□ -1.57
MATR3-219ENST00000512040 ADD1P35611 737 aaKnown RBP5.27□□□□□ -1.57
MATR3-219ENST00000512040 AMPHP49418 695 aa5.27□□□□□ -1.57
MATR3-219ENST00000512040 GSK3AP49840 483 aa5.27□□□□□ -1.57
MATR3-219ENST00000512040 ZNF132P52740 706 aa5.27□□□□□ -1.57
MATR3-219ENST00000512040 CLDN10P78369 228 aa5.27□□□□□ -1.57
MATR3-219ENST00000512040 HTRA3P83110 453 aa5.27□□□□□ -1.57
MATR3-219ENST00000512040 WASHC5Q12768 1159 aa5.27□□□□□ -1.57
MATR3-219ENST00000512040 TSNAXIP1Q2TAA8 658 aa5.27□□□□□ -1.57
MATR3-219ENST00000512040 SLC27A3Q5K4L6 730 aa5.27□□□□□ -1.57
MATR3-219ENST00000512040 NDUFAF2Q8N183 169 aa5.27□□□□□ -1.57
MATR3-219ENST00000512040 KIAA1958Q8N8K9 716 aa5.27□□□□□ -1.57
MATR3-219ENST00000512040 CCDC89Q8N998 374 aa5.27□□□□□ -1.57
MATR3-219ENST00000512040 TEX19Q8NA77 164 aa5.27□□□□□ -1.57
MATR3-219ENST00000512040 IP6K1Q92551 441 aa5.27□□□□□ -1.57
MATR3-219ENST00000512040 SMARCC1Q92922 1105 aaPredicted RBP5.27□□□□□ -1.57
MATR3-219ENST00000512040 LTV1Q96GA3 475 aaPredicted RBP5.27□□□□□ -1.57
MATR3-219ENST00000512040 ZNF594Q96JF6 807 aaPredicted RBP5.27□□□□□ -1.57
MATR3-219ENST00000512040 CDHR1Q96JP9 859 aa5.27□□□□□ -1.57
MATR3-219ENST00000512040 KLF16Q9BXK1 252 aaPredicted RBP5.27□□□□□ -1.57
MATR3-219ENST00000512040 C22orf23Q9BZE7 217 aa5.27□□□□□ -1.57
MATR3-219ENST00000512040 ZNF700Q9H0M5 742 aa5.27□□□□□ -1.57
MATR3-219ENST00000512040 OSBPL3Q9H4L5 887 aa5.27□□□□□ -1.57
MATR3-219ENST00000512040 POLG2Q9UHN1 485 aa5.27□□□□□ -1.57
MATR3-219ENST00000512040 ISY1Q9ULR0 285 aaKnown RBP5.27□□□□□ -1.57
MATR3-219ENST00000512040 PRKAB1Q9Y478 270 aa5.27□□□□□ -1.57
MATR3-219ENST00000512040 VIRMAQ69YN4 1812 aaKnown RBP5.27□□□□□ -1.57
MATR3-219ENST00000512040 FLT4P35916 1363 aa5.27□□□□□ -1.57
MATR3-219ENST00000512040 PALLDQ8WX93 1383 aa5.27□□□□□ -1.57
MATR3-219ENST00000512040 C10orf71Q711Q0 1435 aa5.26□□□□□ -1.57
MATR3-219ENST00000512040 NSD3Q9BZ95 1437 aa5.26□□□□□ -1.57
MATR3-219ENST00000512040 USP17L15C9J2P7 530 aa5.26□□□□□ -1.57
MATR3-219ENST00000512040 USP17L10C9JJH3 530 aa5.26□□□□□ -1.57
MATR3-219ENST00000512040 USP17L13C9JLJ4 530 aa5.26□□□□□ -1.57
MATR3-219ENST00000512040 USP17L12C9JPN9 530 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms