RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 AMOTL1Q8IY63 956 aa23.34■■□□□ 1.33
SMAD1-211ENST00000512019 WRNIP1Q96S55 665 aa23.34■■□□□ 1.33
SMAD1-211ENST00000512019 DHX36Q9H2U1 1008 aaKnown RBP23.34■■□□□ 1.33
SMAD1-211ENST00000512019 ATRNL1Q5VV63 1379 aa23.34■■□□□ 1.33
SMAD1-211ENST00000512019 HSPD1P10809 573 aaKnown RBP23.33■■□□□ 1.33
SMAD1-211ENST00000512019 VPS53Q5VIR6 699 aa23.33■■□□□ 1.33
SMAD1-211ENST00000512019 ZSCAN29Q8IWY8 852 aaPredicted RBP23.33■■□□□ 1.33
SMAD1-211ENST00000512019 DSCC1Q9BVC3 393 aa23.33■■□□□ 1.33
SMAD1-211ENST00000512019 NAPBQ9H115 298 aa23.33■■□□□ 1.33
SMAD1-211ENST00000512019 MCM9Q9NXL9 1143 aa23.33■■□□□ 1.33
SMAD1-211ENST00000512019 ARPP21Q9UBL0 812 aaPredicted RBP23.33■■□□□ 1.33
SMAD1-211ENST00000512019 CENPFP49454 3210 aa23.33■■□□□ 1.33
SMAD1-211ENST00000512019 ZMYM6O95789 1325 aa23.33■■□□□ 1.32
SMAD1-211ENST00000512019 MIGA2Q7L4E1 593 aa23.32■■□□□ 1.32
SMAD1-211ENST00000512019 IFNL3Q8IZI9 196 aa23.32■■□□□ 1.32
SMAD1-211ENST00000512019 EPB41L4AQ9HCS5 686 aaPredicted RBP23.32■■□□□ 1.32
SMAD1-211ENST00000512019 SAP30BPQ9UHR5 308 aaKnown RBP23.32■■□□□ 1.32
SMAD1-211ENST00000512019 FOXP2O15409 715 aa23.31■■□□□ 1.32
SMAD1-211ENST00000512019 REC8O95072 547 aa23.31■■□□□ 1.32
SMAD1-211ENST00000512019 HLA-DOAP06340 250 aa23.31■■□□□ 1.32
SMAD1-211ENST00000512019 ALX1Q15699 326 aa23.31■■□□□ 1.32
SMAD1-211ENST00000512019 ZFPM1Q8IX07 1006 aa23.31■■□□□ 1.32
SMAD1-211ENST00000512019 HOOK2Q96ED9 719 aa23.31■■□□□ 1.32
SMAD1-211ENST00000512019 ZFYVE28Q9HCC9 887 aa23.31■■□□□ 1.32
SMAD1-211ENST00000512019 ANO2Q9NQ90 1003 aa23.31■■□□□ 1.32
SMAD1-211ENST00000512019 MYH1P12882 1939 aa23.31■■□□□ 1.32
SMAD1-211ENST00000512019 IRF6O14896 467 aa23.3■■□□□ 1.32
SMAD1-211ENST00000512019 POLR3DP05423 398 aaPredicted RBP23.3■■□□□ 1.32
SMAD1-211ENST00000512019 TTC6Q86TZ1 520 aa23.3■■□□□ 1.32
SMAD1-211ENST00000512019 ERO1BQ86YB8 467 aa23.3■■□□□ 1.32
SMAD1-211ENST00000512019 INPP5BP32019 993 aa23.29■■□□□ 1.32
SMAD1-211ENST00000512019 ARMC5Q96C12 935 aa23.29■■□□□ 1.32
SMAD1-211ENST00000512019 CTNNA3Q9UI47 895 aa23.29■■□□□ 1.32
SMAD1-211ENST00000512019 PALD1Q9ULE6 856 aa23.29■■□□□ 1.32
SMAD1-211ENST00000512019 KIAA0100Q14667 2235 aaKnown RBP23.29■■□□□ 1.32
SMAD1-211ENST00000512019 BAZ2AQ9UIF9 1905 aaKnown RBP23.29■■□□□ 1.32
SMAD1-211ENST00000512019 DDTLA6NHG4 134 aaPredicted RBP23.28■■□□□ 1.32
SMAD1-211ENST00000512019 BTBD19C9JJ37 291 aa23.28■■□□□ 1.32
SMAD1-211ENST00000512019 USP17L12C9JPN9 530 aa23.28■■□□□ 1.32
SMAD1-211ENST00000512019 USP17L21D6R901 530 aa23.28■■□□□ 1.32
SMAD1-211ENST00000512019 SBK1Q52WX2 424 aa23.28■■□□□ 1.32
SMAD1-211ENST00000512019 DCAF15Q66K64 600 aa23.28■■□□□ 1.32
SMAD1-211ENST00000512019 SH3BP5LQ7L8J4 393 aa23.28■■□□□ 1.32
SMAD1-211ENST00000512019 ZNF341Q9BYN7 854 aa23.28■■□□□ 1.32
SMAD1-211ENST00000512019 LSG1Q9H089 658 aaKnown RBP23.28■■□□□ 1.32
SMAD1-211ENST00000512019 PI4KBQ9UBF8 816 aa23.28■■□□□ 1.32
SMAD1-211ENST00000512019 U3KPZ7 1027 aaPredicted RBP23.28■■□□□ 1.32
SMAD1-211ENST00000512019 FGAP02671 866 aa23.27■■□□□ 1.32
SMAD1-211ENST00000512019 CETPP11597 493 aa23.27■■□□□ 1.32
SMAD1-211ENST00000512019 PPIL2Q13356 520 aa23.27■■□□□ 1.32
SMAD1-211ENST00000512019 C8orf34Q49A92 452 aa23.27■■□□□ 1.32
SMAD1-211ENST00000512019 CTR9Q6PD62 1173 aa23.27■■□□□ 1.32
SMAD1-211ENST00000512019 ARHGAP39Q9C0H5 1083 aa23.27■■□□□ 1.32
SMAD1-211ENST00000512019 PTCH2Q9Y6C5 1203 aa23.27■■□□□ 1.32
SMAD1-211ENST00000512019 PTH1RQ03431 593 aa23.26■■□□□ 1.31
SMAD1-211ENST00000512019 SNAPC2Q13487 334 aa23.26■■□□□ 1.31
SMAD1-211ENST00000512019 SLC4A8Q2Y0W8 1093 aa23.26■■□□□ 1.31
SMAD1-211ENST00000512019 C12orf60Q5U649 245 aa23.26■■□□□ 1.31
SMAD1-211ENST00000512019 TRIM34Q9BYJ4 488 aa23.26■■□□□ 1.31
SMAD1-211ENST00000512019 EHD4Q9H223 541 aa23.26■■□□□ 1.31
SMAD1-211ENST00000512019 TAOK2Q9UL54 1235 aa23.26■■□□□ 1.31
SMAD1-211ENST00000512019 MINDY4BA8MYZ0 360 aa23.25■■□□□ 1.31
SMAD1-211ENST00000512019 EN2P19622 333 aaPredicted RBP23.25■■□□□ 1.31
SMAD1-211ENST00000512019 MAP4K1Q92918 833 aa23.25■■□□□ 1.31
SMAD1-211ENST00000512019 EPB41L2O43491 1005 aaKnown RBP23.24■■□□□ 1.31
SMAD1-211ENST00000512019 TLR2O60603 784 aa23.24■■□□□ 1.31
SMAD1-211ENST00000512019 ECM2O94769 699 aaPredicted RBP23.24■■□□□ 1.31
SMAD1-211ENST00000512019 SLC3A2P08195 630 aaKnown RBP23.24■■□□□ 1.31
SMAD1-211ENST00000512019 CYP2D6P10635 497 aa23.24■■□□□ 1.31
SMAD1-211ENST00000512019 PPATQ06203 517 aa23.24■■□□□ 1.31
SMAD1-211ENST00000512019 PPARAQ07869 468 aa23.24■■□□□ 1.31
SMAD1-211ENST00000512019 IMMTQ16891 758 aaKnown RBP23.24■■□□□ 1.31
SMAD1-211ENST00000512019 FOXP4Q8IVH2 680 aaPredicted RBP23.24■■□□□ 1.31
SMAD1-211ENST00000512019 CRACR2BQ8N4Y2 399 aaPredicted RBP23.24■■□□□ 1.31
SMAD1-211ENST00000512019 HERC5Q9UII4 1024 aaKnown RBP23.24■■□□□ 1.31
SMAD1-211ENST00000512019 SERPINB13Q9UIV8 391 aa23.24■■□□□ 1.31
SMAD1-211ENST00000512019 ZNF112Q9UJU3 913 aa23.24■■□□□ 1.31
SMAD1-211ENST00000512019 MKI67P46013 3256 aaKnown RBP23.24■■□□□ 1.31
SMAD1-211ENST00000512019 ROBO3Q96MS0 1386 aa23.24■■□□□ 1.31
SMAD1-211ENST00000512019 LAMA4Q16363 1823 aa23.24■■□□□ 1.31
SMAD1-211ENST00000512019 BRCA2P51587 3418 aa23.23■■□□□ 1.31
SMAD1-211ENST00000512019 CYP2D7A0A087X1C5 515 aa23.23■■□□□ 1.31
SMAD1-211ENST00000512019 PLCD1P51178 756 aa23.23■■□□□ 1.31
SMAD1-211ENST00000512019 ZNF333Q96JL9 665 aa23.23■■□□□ 1.31
SMAD1-211ENST00000512019 RBM8AQ9Y5S9 174 aaKnown RBP23.23■■□□□ 1.31
SMAD1-211ENST00000512019 SIPA1L1O43166 1804 aa23.22■■□□□ 1.31
SMAD1-211ENST00000512019 TBC1D12O60347 775 aa23.22■■□□□ 1.31
SMAD1-211ENST00000512019 ZCCHC17Q9NP64 241 aaKnown RBP23.22■■□□□ 1.31
SMAD1-211ENST00000512019 MGAMO43451 1857 aa23.22■■□□□ 1.31
SMAD1-211ENST00000512019 PTPRFP10586 1907 aa23.21■■□□□ 1.31
SMAD1-211ENST00000512019 ZNF213O14771 459 aa23.21■■□□□ 1.31
SMAD1-211ENST00000512019 LACTBP83111 547 aaPredicted RBP23.21■■□□□ 1.31
SMAD1-211ENST00000512019 SLC9C1Q4G0N8 1177 aa23.21■■□□□ 1.31
SMAD1-211ENST00000512019 METTL16Q86W50 562 aaKnown RBP23.21■■□□□ 1.31
SMAD1-211ENST00000512019 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.21■■□□□ 1.31
SMAD1-211ENST00000512019 ZNF287Q9HBT7 754 aa23.21■■□□□ 1.31
SMAD1-211ENST00000512019 SWAP70Q9UH65 585 aa23.21■■□□□ 1.31
SMAD1-211ENST00000512019 ANAPC4Q9UJX5 808 aa23.21■■□□□ 1.31
SMAD1-211ENST00000512019 PHIPQ8WWQ0 1821 aa23.21■■□□□ 1.31
SMAD1-211ENST00000512019 DOCK1Q14185 1865 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms