RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 TSHZ3Q63HK5 1081 aa5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 USP17L2Q6R6M4 530 aa5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 MPRIPQ6WCQ1 1025 aa5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 MCM10Q7L590 875 aa5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 USP17L1Q7RTZ2 530 aa5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 C11orf74Q86VG3 221 aa5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 UHMK1Q8TAS1 419 aaKnown RBP5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 FAM200AQ8TCP9 573 aa5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 MS4A3Q96HJ5 214 aa5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 TMEM106CQ9BVX2 250 aa5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 SRRTQ9BXP5 876 aaKnown RBP5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 ABCG4Q9H172 646 aa5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 NEUROD4Q9HD90 331 aa5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 DCAF16Q9NXF7 216 aa5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 RRP7AQ9Y3A4 280 aaKnown RBP5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 GOLGB1Q14789 3259 aaKnown RBP5.86□□□□□ -1.47
TRAPPC11-208ENST00000511955 DISP2A7MBM2 1401 aa5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 LRRC37A3O60309 1634 aa5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 ATF4P18848 351 aaPredicted RBP5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 SLC4A3P48751 1232 aa5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 PRIM1P49642 420 aaKnown RBP5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 KCNQ4P56696 695 aa5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 GOLGA2Q08379 1002 aa5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 MORC3Q14149 939 aa5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 ARSHQ5FYA8 562 aa5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 PRPF38BQ5VTL8 546 aaKnown RBP5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 TMC7Q7Z402 723 aa5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 TMC4Q7Z404 712 aa5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 IPCEF1Q8WWN9 437 aaPredicted RBP5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 DEPDC7Q96QD5 511 aa5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 PNNQ9H307 717 aaKnown RBP5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 EGFL7Q9UHF1 273 aa5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 COL3A1P02461 1466 aaPredicted RBP5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 OVOS2A0A0G2JMS6 1433 aa5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 TNS2Q63HR2 1409 aa5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 FAM208AQ9UK61 1670 aaKnown RBP5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 THSD7AQ9UPZ6 1657 aa5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 PCDH11XQ9BZA7 1347 aa5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 PCDH11YQ9BZA8 1340 aa5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 FAM196BA6NMK8 535 aa5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 HTATSF1O43719 755 aaKnown RBP5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 APBA3O96018 575 aa5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 HNRNPCP07910 306 aaKnown RBP eCLIP5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 ST13P50502 369 aaKnown RBP5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 MTHFSDQ2M296 383 aaKnown RBP5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 PLEKHO1Q53GL0 409 aaPredicted RBP5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 C1orf141Q5JVX7 400 aa5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 KIAA1614Q5VZ46 1190 aa5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 MMS22LQ6ZRQ5 1243 aa5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 FAM196AQ6ZSG2 479 aa5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 KIAA0825Q8IV33 1275 aa5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 BRSK2Q8IWQ3 736 aa5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 UPF1Q92900 1129 aaKnown RBP eCLIP5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 SNX21Q969T3 373 aa5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 SPAG5Q96R06 1193 aa5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 SETDB2Q96T68 719 aa5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 SLX1AQ9BQ83 275 aa5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 POLR3CQ9BUI4 534 aaPredicted RBP5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 AP1M1Q9BXS5 423 aa5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 ZNF408Q9H9D4 720 aa5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 CYLDQ9NQC7 956 aa5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 TSKSQ9UJT2 592 aa5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 ADAMTS8Q9UP79 889 aa5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 IPPQ9Y573 584 aa5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 SNX5Q9Y5X3 404 aa5.85□□□□□ -1.47
TRAPPC11-208ENST00000511955 RASSF10A6NK89 507 aa5.84□□□□□ -1.47
TRAPPC11-208ENST00000511955 H0Y3Z8 333 aa5.84□□□□□ -1.47
TRAPPC11-208ENST00000511955 PRPF3O43395 683 aaKnown RBP5.84□□□□□ -1.47
TRAPPC11-208ENST00000511955 VARSP26640 1264 aaKnown RBP5.84□□□□□ -1.47
TRAPPC11-208ENST00000511955 UBA7P41226 1012 aa5.84□□□□□ -1.47
TRAPPC11-208ENST00000511955 EN1Q05925 392 aaPredicted RBP5.84□□□□□ -1.47
TRAPPC11-208ENST00000511955 RASA3Q14644 834 aa5.84□□□□□ -1.47
TRAPPC11-208ENST00000511955 PARP10Q53GL7 1025 aa5.84□□□□□ -1.47
TRAPPC11-208ENST00000511955 UTP14CQ5TAP6 766 aaKnown RBP5.84□□□□□ -1.47
TRAPPC11-208ENST00000511955 OTUD6AQ7L8S5 288 aa5.84□□□□□ -1.47
TRAPPC11-208ENST00000511955 ZNF354CQ86Y25 554 aa5.84□□□□□ -1.47
TRAPPC11-208ENST00000511955 ZNF654Q8IZM8 581 aa5.84□□□□□ -1.47
TRAPPC11-208ENST00000511955 SMAD5Q99717 465 aaKnown RBP5.84□□□□□ -1.47
TRAPPC11-208ENST00000511955 EIF2AK1Q9BQI3 630 aaKnown RBP5.84□□□□□ -1.47
TRAPPC11-208ENST00000511955 TRIM55Q9BYV6 548 aa5.84□□□□□ -1.47
TRAPPC11-208ENST00000511955 RRAGDQ9NQL2 400 aaPredicted RBP5.84□□□□□ -1.47
TRAPPC11-208ENST00000511955 MAPK8IP3Q9UPT6 1336 aa5.84□□□□□ -1.48
TRAPPC11-208ENST00000511955 FMNL1O95466 1100 aaPredicted RBP5.83□□□□□ -1.48
TRAPPC11-208ENST00000511955 GYS1P13807 737 aa5.83□□□□□ -1.48
TRAPPC11-208ENST00000511955 PHKG2P15735 406 aa5.83□□□□□ -1.48
TRAPPC11-208ENST00000511955 IL4RP24394 825 aa5.83□□□□□ -1.48
TRAPPC11-208ENST00000511955 DNAJB2P25686 324 aa5.83□□□□□ -1.48
TRAPPC11-208ENST00000511955 PSMA3P25788 255 aa5.83□□□□□ -1.48
TRAPPC11-208ENST00000511955 PPP2R5CQ13362 524 aa5.83□□□□□ -1.48
TRAPPC11-208ENST00000511955 PTPN14Q15678 1187 aa5.83□□□□□ -1.48
TRAPPC11-208ENST00000511955 FXNQ16595 210 aa5.83□□□□□ -1.48
TRAPPC11-208ENST00000511955 CPLX2Q6PUV4 134 aaKnown RBP5.83□□□□□ -1.48
TRAPPC11-208ENST00000511955 RASGRP2Q7LDG7 609 aa5.83□□□□□ -1.48
TRAPPC11-208ENST00000511955 IFNL2Q8IZJ0 200 aa5.83□□□□□ -1.48
TRAPPC11-208ENST00000511955 C2orf49Q9BVC5 232 aaPredicted RBP5.83□□□□□ -1.48
TRAPPC11-208ENST00000511955 MKS1Q9NXB0 559 aa5.83□□□□□ -1.48
TRAPPC11-208ENST00000511955 XPO7Q9UIA9 1087 aaKnown RBP5.83□□□□□ -1.48
TRAPPC11-208ENST00000511955 RRP15Q9Y3B9 282 aaKnown RBP5.83□□□□□ -1.48
TRAPPC11-208ENST00000511955 CEP83Q9Y592 693 aa5.83□□□□□ -1.48
TRAPPC11-208ENST00000511955 BOLA2-SMG1P6H3BVE0 249 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms