RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 GLRX3O76003 335 aaKnown RBP14.36□□□□□ -0.11
RNF4-216ENST00000511859 LDHCP07864 332 aa14.36□□□□□ -0.11
RNF4-216ENST00000511859 FOSL2P15408 326 aa14.36□□□□□ -0.11
RNF4-216ENST00000511859 ATN1P54259 1190 aaPredicted RBP14.36□□□□□ -0.11
RNF4-216ENST00000511859 MFSD14CQ5VZR4 134 aa14.36□□□□□ -0.11
RNF4-216ENST00000511859 CCDC102BQ68D86 513 aa14.36□□□□□ -0.11
RNF4-216ENST00000511859 ERICH6Q7L0X2 663 aa14.36□□□□□ -0.11
RNF4-216ENST00000511859 EDC3Q96F86 508 aaKnown RBP14.36□□□□□ -0.11
RNF4-216ENST00000511859 DDX20Q9UHI6 824 aaKnown RBP14.36□□□□□ -0.11
RNF4-216ENST00000511859 SALL2Q9Y467 1007 aaPredicted RBP14.36□□□□□ -0.11
RNF4-216ENST00000511859 MAST2Q6P0Q8 1798 aa14.36□□□□□ -0.11
RNF4-216ENST00000511859 TMEM265A0A087WTH1 108 aa14.35□□□□□ -0.11
RNF4-216ENST00000511859 TNFRSF10AO00220 468 aa14.35□□□□□ -0.11
RNF4-216ENST00000511859 ASNSP08243 561 aa14.35□□□□□ -0.11
RNF4-216ENST00000511859 MAP2K5Q13163 448 aa14.35□□□□□ -0.11
RNF4-216ENST00000511859 MTMR2Q13614 643 aa14.35□□□□□ -0.11
RNF4-216ENST00000511859 RRP1BQ14684 758 aaKnown RBP14.35□□□□□ -0.11
RNF4-216ENST00000511859 TJAP1Q5JTD0 557 aa14.35□□□□□ -0.11
RNF4-216ENST00000511859 PORCNQ9H237 461 aa14.35□□□□□ -0.11
RNF4-216ENST00000511859 TTYH1Q9H313 450 aaPredicted RBP14.35□□□□□ -0.11
RNF4-216ENST00000511859 PI4KBQ9UBF8 816 aa14.35□□□□□ -0.11
RNF4-216ENST00000511859 PTPRCP08575 1304 aa14.35□□□□□ -0.11
RNF4-216ENST00000511859 USP17L10C9JJH3 530 aa14.34□□□□□ -0.11
RNF4-216ENST00000511859 PEX10O60683 326 aa14.34□□□□□ -0.11
RNF4-216ENST00000511859 IL15P40933 162 aaPredicted RBP14.34□□□□□ -0.11
RNF4-216ENST00000511859 RTP1P59025 263 aa14.34□□□□□ -0.11
RNF4-216ENST00000511859 GSTO1P78417 241 aa14.34□□□□□ -0.11
RNF4-216ENST00000511859 MECOMQ03112 1051 aa14.34□□□□□ -0.11
RNF4-216ENST00000511859 RASGRF1Q13972 1273 aa14.34□□□□□ -0.11
RNF4-216ENST00000511859 SIL1Q9H173 461 aa14.34□□□□□ -0.11
RNF4-216ENST00000511859 CWC22Q9HCG8 908 aaKnown RBP14.34□□□□□ -0.11
RNF4-216ENST00000511859 GINM1Q9NU53 330 aa14.34□□□□□ -0.11
RNF4-216ENST00000511859 LTBP2Q14767 1821 aa14.34□□□□□ -0.11
RNF4-216ENST00000511859 RLFQ13129 1914 aa14.34□□□□□ -0.11
RNF4-216ENST00000511859 CCNA1P78396 465 aa14.34□□□□□ -0.11
RNF4-216ENST00000511859 CCDC184Q52MB2 194 aa14.34□□□□□ -0.11
RNF4-216ENST00000511859 C9orf50Q5SZB4 431 aa14.34□□□□□ -0.11
RNF4-216ENST00000511859 ARRDC4Q8NCT1 418 aa14.34□□□□□ -0.11
RNF4-216ENST00000511859 DHX36Q9H2U1 1008 aaKnown RBP14.34□□□□□ -0.11
RNF4-216ENST00000511859 ATP11BQ9Y2G3 1177 aa14.34□□□□□ -0.11
RNF4-216ENST00000511859 CNGA1P29973 690 aa14.33□□□□□ -0.12
RNF4-216ENST00000511859 ATP2B2Q01814 1243 aa14.33□□□□□ -0.12
RNF4-216ENST00000511859 SLC39A5Q6ZMH5 540 aa14.33□□□□□ -0.12
RNF4-216ENST00000511859 PAGR1Q9BTK6 254 aa14.33□□□□□ -0.12
RNF4-216ENST00000511859 RABGAP1Q9Y3P9 1069 aa14.33□□□□□ -0.12
RNF4-216ENST00000511859 HOXC6P09630 235 aa14.32□□□□□ -0.12
RNF4-216ENST00000511859 ADORA1P30542 326 aa14.32□□□□□ -0.12
RNF4-216ENST00000511859 FOXP4Q8IVH2 680 aaPredicted RBP14.32□□□□□ -0.12
RNF4-216ENST00000511859 MRPL50Q8N5N7 158 aaKnown RBP14.32□□□□□ -0.12
RNF4-216ENST00000511859 BADQ92934 168 aa14.32□□□□□ -0.12
RNF4-216ENST00000511859 FLRT1Q9NZU1 646 aa14.32□□□□□ -0.12
RNF4-216ENST00000511859 SLC15A5A6NIM6 579 aa14.31□□□□□ -0.12
RNF4-216ENST00000511859 PTPREP23469 700 aa14.31□□□□□ -0.12
RNF4-216ENST00000511859 TIMM10P62072 90 aa14.31□□□□□ -0.12
RNF4-216ENST00000511859 ZNF384Q8TF68 577 aa14.31□□□□□ -0.12
RNF4-216ENST00000511859 NSUN4Q96CB9 384 aaKnown RBP14.31□□□□□ -0.12
RNF4-216ENST00000511859 PRDM5Q9NQX1 630 aaPredicted RBP14.31□□□□□ -0.12
RNF4-216ENST00000511859 KBTBD13C9JR72 458 aa14.3□□□□□ -0.12
RNF4-216ENST00000511859 MVPQ14764 893 aaKnown RBP14.3□□□□□ -0.12
RNF4-216ENST00000511859 SNX17Q15036 470 aa14.3□□□□□ -0.12
RNF4-216ENST00000511859 GJC2Q5T442 439 aaPredicted RBP14.3□□□□□ -0.12
RNF4-216ENST00000511859 C1orf53Q5VUE5 145 aa14.3□□□□□ -0.12
RNF4-216ENST00000511859 USP17L2Q6R6M4 530 aa14.3□□□□□ -0.12
RNF4-216ENST00000511859 POTEEQ6S8J3 1075 aa14.3□□□□□ -0.12
RNF4-216ENST00000511859 METTL16Q86W50 562 aaKnown RBP14.3□□□□□ -0.12
RNF4-216ENST00000511859 TEX11Q8IYF3 940 aa14.3□□□□□ -0.12
RNF4-216ENST00000511859 EMILIN3Q9NT22 766 aa14.3□□□□□ -0.12
RNF4-216ENST00000511859 HDAC5Q9UQL6 1122 aa14.3□□□□□ -0.12
RNF4-216ENST00000511859 AKAP2Q9Y2D5 859 aa14.3□□□□□ -0.12
RNF4-216ENST00000511859 IVNS1ABPQ9Y6Y0 642 aa14.3□□□□□ -0.12
RNF4-216ENST00000511859 BDP1A6H8Y1 2624 aa14.3□□□□□ -0.12
RNF4-216ENST00000511859 COPRSQ9NQ92 184 aa14.29□□□□□ -0.12
RNF4-216ENST00000511859 USP17L15C9J2P7 530 aa14.28□□□□□ -0.12
RNF4-216ENST00000511859 USP17L13C9JLJ4 530 aa14.28□□□□□ -0.12
RNF4-216ENST00000511859 USP17L11C9JVI0 530 aa14.28□□□□□ -0.12
RNF4-216ENST00000511859 USP17L18D6R9N7 530 aa14.28□□□□□ -0.12
RNF4-216ENST00000511859 USP17L22D6RA61 530 aa14.28□□□□□ -0.12
RNF4-216ENST00000511859 USP17L17D6RBQ6 530 aa14.28□□□□□ -0.12
RNF4-216ENST00000511859 USP17L19D6RCP7 530 aa14.28□□□□□ -0.12
RNF4-216ENST00000511859 USP17L20D6RJB6 530 aa14.28□□□□□ -0.12
RNF4-216ENST00000511859 CYP2C19P33261 490 aa14.28□□□□□ -0.12
RNF4-216ENST00000511859 PLA2G5P39877 138 aa14.28□□□□□ -0.12
RNF4-216ENST00000511859 JAG1P78504 1218 aa14.28□□□□□ -0.12
RNF4-216ENST00000511859 USP17L24Q0WX57 530 aa14.28□□□□□ -0.12
RNF4-216ENST00000511859 GRB14Q14449 540 aa14.28□□□□□ -0.12
RNF4-216ENST00000511859 WDR78Q5VTH9 848 aa14.28□□□□□ -0.12
RNF4-216ENST00000511859 ATXN2LQ8WWM7 1075 aaKnown RBP14.28□□□□□ -0.12
RNF4-216ENST00000511859 XAGE2Q96GT9 111 aa14.28□□□□□ -0.12
RNF4-216ENST00000511859 NOL10Q9BSC4 688 aaKnown RBP14.28□□□□□ -0.12
RNF4-216ENST00000511859 TRIM34Q9BYJ4 488 aa14.28□□□□□ -0.12
RNF4-216ENST00000511859 PDLIM7Q9NR12 457 aa14.28□□□□□ -0.12
RNF4-216ENST00000511859 TACC3Q9Y6A5 838 aa14.28□□□□□ -0.12
RNF4-216ENST00000511859 SMCHD1A6NHR9 2005 aa14.27□□□□□ -0.12
RNF4-216ENST00000511859 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.27□□□□□ -0.12
RNF4-216ENST00000511859 A0A1B0GUL7 405 aa14.27□□□□□ -0.12
RNF4-216ENST00000511859 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.27□□□□□ -0.12
RNF4-216ENST00000511859 TRIM43BA6NCK2 446 aa14.27□□□□□ -0.12
RNF4-216ENST00000511859 CNMDO75829 334 aa14.27□□□□□ -0.12
RNF4-216ENST00000511859 BAG3O95817 575 aa14.27□□□□□ -0.12
RNF4-216ENST00000511859 IGHA2P01877 340 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms