RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 GPRC5AQ8NFJ5 357 aa23.57■■□□□ 1.36
HMGCS1-206ENST00000511774 SOCS4Q8WXH5 440 aa23.57■■□□□ 1.36
HMGCS1-206ENST00000511774 SH3RF3Q8TEJ3 882 aaPredicted RBP23.56■■□□□ 1.36
HMGCS1-206ENST00000511774 ERVK-9P63128 1117 aa23.55■■□□□ 1.36
HMGCS1-206ENST00000511774 ERVK-24P63145 666 aa23.55■■□□□ 1.36
HMGCS1-206ENST00000511774 GPR142Q7Z601 462 aa23.55■■□□□ 1.36
HMGCS1-206ENST00000511774 TEX11Q8IYF3 940 aa23.55■■□□□ 1.36
HMGCS1-206ENST00000511774 AS3MTQ9HBK9 375 aa23.55■■□□□ 1.36
HMGCS1-206ENST00000511774 FLRT1Q9NZU1 646 aa23.55■■□□□ 1.36
HMGCS1-206ENST00000511774 FOCADQ5VW36 1801 aa23.54■■□□□ 1.36
HMGCS1-206ENST00000511774 MYO5AQ9Y4I1 1855 aaKnown RBP23.54■■□□□ 1.36
HMGCS1-206ENST00000511774 MEIS3Q99687 375 aa23.54■■□□□ 1.36
HMGCS1-206ENST00000511774 HERC5Q9UII4 1024 aaKnown RBP23.54■■□□□ 1.36
HMGCS1-206ENST00000511774 MAPK4P31152 587 aa23.53■■□□□ 1.36
HMGCS1-206ENST00000511774 PAGR1Q9BTK6 254 aa23.53■■□□□ 1.36
HMGCS1-206ENST00000511774 TMOD4Q9NZQ9 345 aa23.53■■□□□ 1.36
HMGCS1-206ENST00000511774 CNMDO75829 334 aa23.52■■□□□ 1.36
HMGCS1-206ENST00000511774 GDF11O95390 407 aa23.52■■□□□ 1.36
HMGCS1-206ENST00000511774 MAP4K4O95819 1239 aaPredicted RBP23.52■■□□□ 1.36
HMGCS1-206ENST00000511774 RGS2P41220 211 aa23.52■■□□□ 1.36
HMGCS1-206ENST00000511774 MVPQ14764 893 aaKnown RBP23.52■■□□□ 1.36
HMGCS1-206ENST00000511774 PLEKHH3Q7Z736 793 aa23.52■■□□□ 1.36
HMGCS1-206ENST00000511774 TRMT44Q8IYL2 757 aaKnown RBP23.52■■□□□ 1.36
HMGCS1-206ENST00000511774 SPATA5Q8NB90 893 aa23.52■■□□□ 1.36
HMGCS1-206ENST00000511774 APBA2Q99767 749 aa23.52■■□□□ 1.36
HMGCS1-206ENST00000511774 NDUFB9Q9Y6M9 179 aa23.52■■□□□ 1.36
HMGCS1-206ENST00000511774 RLFQ13129 1914 aa23.51■■□□□ 1.35
HMGCS1-206ENST00000511774 LDHCP07864 332 aa23.51■■□□□ 1.35
HMGCS1-206ENST00000511774 PDE3AQ14432 1141 aa23.51■■□□□ 1.35
HMGCS1-206ENST00000511774 SENP6Q9GZR1 1112 aaPredicted RBP23.51■■□□□ 1.35
HMGCS1-206ENST00000511774 EMILIN3Q9NT22 766 aa23.51■■□□□ 1.35
HMGCS1-206ENST00000511774 RAI14Q9P0K7 980 aa23.51■■□□□ 1.35
HMGCS1-206ENST00000511774 PI4KBQ9UBF8 816 aa23.51■■□□□ 1.35
HMGCS1-206ENST00000511774 MUC3AQ02505 3323 aa23.51■■□□□ 1.35
HMGCS1-206ENST00000511774 ASNSP08243 561 aa23.5■■□□□ 1.35
HMGCS1-206ENST00000511774 MCAMP43121 646 aa23.5■■□□□ 1.35
HMGCS1-206ENST00000511774 ATN1P54259 1190 aaPredicted RBP23.5■■□□□ 1.35
HMGCS1-206ENST00000511774 GSTO1P78417 241 aa23.5■■□□□ 1.35
HMGCS1-206ENST00000511774 METTL16Q86W50 562 aaKnown RBP23.5■■□□□ 1.35
HMGCS1-206ENST00000511774 SMC4Q9NTJ3 1288 aa23.5■■□□□ 1.35
HMGCS1-206ENST00000511774 USP17L10C9JJH3 530 aa23.49■■□□□ 1.35
HMGCS1-206ENST00000511774 ARID4AP29374 1257 aaPredicted RBP23.49■■□□□ 1.35
HMGCS1-206ENST00000511774 ALDH1L2Q3SY69 923 aa23.49■■□□□ 1.35
HMGCS1-206ENST00000511774 ADGRA1Q86SQ6 560 aa23.49■■□□□ 1.35
HMGCS1-206ENST00000511774 NEUROD6Q96NK8 337 aa23.49■■□□□ 1.35
HMGCS1-206ENST00000511774 CDX2Q99626 313 aaPredicted RBP23.49■■□□□ 1.35
HMGCS1-206ENST00000511774 ZBTB21Q9ULJ3 1066 aa23.49■■□□□ 1.35
HMGCS1-206ENST00000511774 C19orf81C9J6K1 198 aa23.48■■□□□ 1.35
HMGCS1-206ENST00000511774 SLFN5Q08AF3 891 aa23.48■■□□□ 1.35
HMGCS1-206ENST00000511774 MAP2K5Q13163 448 aa23.48■■□□□ 1.35
HMGCS1-206ENST00000511774 MAPKAPK5Q8IW41 473 aa23.48■■□□□ 1.35
HMGCS1-206ENST00000511774 TRPV1Q8NER1 839 aa23.48■■□□□ 1.35
HMGCS1-206ENST00000511774 AATFQ9NY61 560 aaKnown RBP eCLIP23.48■■□□□ 1.351e-6■■■□□ 16.4
HMGCS1-206ENST00000511774 AKAP2Q9Y2D5 859 aa23.48■■□□□ 1.35
HMGCS1-206ENST00000511774 E9PSI1 815 aa23.47■■□□□ 1.35
HMGCS1-206ENST00000511774 C9orf50Q5SZB4 431 aa23.47■■□□□ 1.35
HMGCS1-206ENST00000511774 TGFBRAP1Q8WUH2 860 aa23.47■■□□□ 1.35
HMGCS1-206ENST00000511774 PALD1Q9ULE6 856 aa23.47■■□□□ 1.35
HMGCS1-206ENST00000511774 NOB1Q9ULX3 412 aaKnown RBP23.47■■□□□ 1.35
HMGCS1-206ENST00000511774 FLT1P17948 1338 aa23.47■■□□□ 1.35
HMGCS1-206ENST00000511774 ANP32CO43423 234 aa23.46■■□□□ 1.35
HMGCS1-206ENST00000511774 SHHQ15465 462 aa23.46■■□□□ 1.35
HMGCS1-206ENST00000511774 ZNF697Q5TEC3 545 aa23.46■■□□□ 1.35
HMGCS1-206ENST00000511774 CDCA7LQ96GN5 454 aa23.46■■□□□ 1.35
HMGCS1-206ENST00000511774 LBHD1Q9BQE6 289 aaPredicted RBP23.46■■□□□ 1.35
HMGCS1-206ENST00000511774 DHX36Q9H2U1 1008 aaKnown RBP23.46■■□□□ 1.35
HMGCS1-206ENST00000511774 DDX20Q9UHI6 824 aaKnown RBP23.46■■□□□ 1.35
HMGCS1-206ENST00000511774 SRGAP3O43295 1099 aa23.45■■□□□ 1.34
HMGCS1-206ENST00000511774 IGHA2P01877 340 aa23.45■■□□□ 1.34
HMGCS1-206ENST00000511774 RTP1P59025 263 aa23.45■■□□□ 1.34
HMGCS1-206ENST00000511774 NPLOC4Q8TAT6 608 aa23.45■■□□□ 1.34
HMGCS1-206ENST00000511774 EDC3Q96F86 508 aaKnown RBP23.45■■□□□ 1.34
HMGCS1-206ENST00000511774 TTYH1Q9H313 450 aaPredicted RBP23.45■■□□□ 1.34
HMGCS1-206ENST00000511774 SEMA6BQ9H3T3 888 aa23.45■■□□□ 1.34
HMGCS1-206ENST00000511774 CCAR1Q8IX12 1150 aaKnown RBP23.44■■□□□ 1.34
HMGCS1-206ENST00000511774 MAFAQ8NHW3 353 aaPredicted RBP23.44■■□□□ 1.34
HMGCS1-206ENST00000511774 SNRKQ9NRH2 765 aa23.44■■□□□ 1.34
HMGCS1-206ENST00000511774 LRP2BPQ9P2M1 347 aa23.44■■□□□ 1.34
HMGCS1-206ENST00000511774 SAP30BPQ9UHR5 308 aaKnown RBP23.44■■□□□ 1.34
HMGCS1-206ENST00000511774 MYH1P12882 1939 aa23.43■■□□□ 1.34
HMGCS1-206ENST00000511774 CYP2C19P33261 490 aa23.43■■□□□ 1.34
HMGCS1-206ENST00000511774 MTX1Q13505 466 aa23.43■■□□□ 1.34
HMGCS1-206ENST00000511774 ZYXQ15942 572 aaKnown RBP23.43■■□□□ 1.34
HMGCS1-206ENST00000511774 USP17L2Q6R6M4 530 aa23.43■■□□□ 1.34
HMGCS1-206ENST00000511774 MYLIPQ8WY64 445 aa23.43■■□□□ 1.34
HMGCS1-206ENST00000511774 LPAR1Q92633 364 aa23.43■■□□□ 1.34
HMGCS1-206ENST00000511774 BTBD7Q9P203 1132 aa23.43■■□□□ 1.34
HMGCS1-206ENST00000511774 RABGAP1Q9Y3P9 1069 aa23.43■■□□□ 1.34
HMGCS1-206ENST00000511774 PTPREP23469 700 aa23.42■■□□□ 1.34
HMGCS1-206ENST00000511774 PPP4CP60510 307 aa23.42■■□□□ 1.34
HMGCS1-206ENST00000511774 MFSD14CQ5VZR4 134 aa23.42■■□□□ 1.34
HMGCS1-206ENST00000511774 FOXP4Q8IVH2 680 aaPredicted RBP23.42■■□□□ 1.34
HMGCS1-206ENST00000511774 GTF3C2Q8WUA4 911 aaPredicted RBP23.42■■□□□ 1.34
HMGCS1-206ENST00000511774 SLC15A5A6NIM6 579 aa23.41■■□□□ 1.34
HMGCS1-206ENST00000511774 GH2P01242 217 aa23.41■■□□□ 1.34
HMGCS1-206ENST00000511774 CNGA1P29973 690 aa23.41■■□□□ 1.34
HMGCS1-206ENST00000511774 GJC2Q5T442 439 aaPredicted RBP23.41■■□□□ 1.34
HMGCS1-206ENST00000511774 GORABQ5T7V8 394 aa23.41■■□□□ 1.34
HMGCS1-206ENST00000511774 NAA16Q6N069 864 aaPredicted RBP23.41■■□□□ 1.34
HMGCS1-206ENST00000511774 CRACR2BQ8N4Y2 399 aaPredicted RBP23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms